Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0671 Trochodendron aralioides HOM05D003055 ORTHO05D004002 4.2e-84 314.7 163 100.0
Aqoxy1G00661 Aquilegia oxysepala HOM05D003055 ORTHO05D004002 2.6e-57 225.7 129 91.5
Hma1.2p1_0926F.1_g237540 Hydrangea macrophylla HOM05D003055 ORTHO05D004002 8.2e-56 220.7 129 89.9
Potri.008G018300 Populus trichocarpa HOM05D003055 ORTHO05D004002 1.4e-55 219.9 129 86.8
Sabra10G0189700 Salix brachista HOM05D003055 ORTHO05D004002 1.8e-55 219.5 129 87.6
MBI19_g27265_MAGBIO Magnolia biondii HOM05D003055 ORTHO05D004002 2.4e-55 219.2 129 87.6
Potri.010G242700 Populus trichocarpa HOM05D003055 ORTHO05D004002 7.0e-55 217.6 129 86.8
TAR369G0320 Trochodendron aralioides HOM05D003055 ORTHO05D004002 2.0e-54 216.1 130 89.2
Dinv08584 Davidia involucrata HOM05D003055 ORTHO05D004002 2.6e-54 215.7 130 86.9
CSS0036043 Camellia sinensis var. sinensis HOM05D003055 ORTHO05D004002 5.9e-54 214.5 129 86.8
Cc02_g09370 Coffea canephora HOM05D003055 ORTHO05D004002 7.7e-54 214.2 130 86.9
FvH4_7g05380 Fragaria vesca HOM05D003055 ORTHO05D004002 1.3e-53 213.4 130 86.2
FAN07G0736 Fragaria x ananassa HOM05D003055 ORTHO05D004002 1.3e-53 213.4 130 86.2
FAN06G0541 Fragaria x ananassa HOM05D003055 ORTHO05D004002 2.2e-53 212.6 143 80.4
Nn6g34695 Nelumbo nucifera HOM05D003055 ORTHO05D004002 2.2e-53 212.6 130 88.5
CiPaw.14G034900 Carya illinoinensis HOM05D003055 ORTHO05D004002 2.9e-53 212.2 129 82.9
FAN01G0006 Fragaria x ananassa HOM05D003055 ORTHO05D004002 2.9e-53 212.2 130 85.4
RcHm_v2.0_Chr1g0331931 Rosa chinensis HOM05D003055 ORTHO05D004002 2.9e-53 212.2 130 86.2
ATR0037G030 Amborella trichopoda HOM05D003055 ORTHO05D004002 5.0e-53 211.5 129 85.3
ClCG05G021950 Citrullus lanatus HOM05D003055 ORTHO05D004002 6.5e-53 211.1 130 84.6
Prupe.1G550400 Prunus persica HOM05D003055 ORTHO05D004002 6.5e-53 211.1 130 84.6
CiPaw.13G043700 Carya illinoinensis HOM05D003055 ORTHO05D004002 8.5e-53 210.7 129 83.7
Oeu009249.1 Olea europaea HOM05D003055 ORTHO05D004002 1.1e-52 210.3 130 84.6
THA.LOC104816475 Tarenaya hassleriana HOM05D003055 ORTHO05D004002 1.1e-52 210.3 130 84.6
MELO3C004965.2 Cucumis melo HOM05D003055 ORTHO05D004002 1.5e-52 209.9 130 83.8
vmacro10323 Vaccinium macrocarpon HOM05D003055 ORTHO05D004002 1.9e-52 209.5 120 89.2
Phvul.007G137700 Phaseolus vulgaris HOM05D003055 ORTHO05D004002 2.5e-52 209.1 130 83.8
Sed0007836 Sechium edule HOM05D003055 ORTHO05D004002 4.2e-52 208.4 130 83.1
SalBow3G3414 Salvia bowleyana HOM05D003055 ORTHO05D004002 5.5e-52 208.0 130 83.1
Cfa010523 Carpinus fangiana HOM05D003055 ORTHO05D004002 9.4e-52 207.2 130 83.8
Lj2A35T41 Lonicera japonica HOM05D003055 ORTHO05D004002 1.2e-51 206.8 130 83.8
Migut.F00845 Erythranthe guttata HOM05D003055 ORTHO05D004002 2.1e-51 206.1 129 82.9
Lsat_1_v5_gn_2_105880 Lactuca sativa HOM05D003055 ORTHO05D004002 2.1e-51 206.1 127 81.9
VMungo0720G1868 Vigna mungo HOM05D003055 ORTHO05D004002 2.1e-51 206.1 130 83.1
Glyma.10G195600 Glycine max HOM05D003055 ORTHO05D004002 2.7e-51 205.7 130 82.3
PSO339G4912 Papaver somniferum HOM05D003055 ORTHO05D004002 2.7e-51 205.7 129 86.0
PSO384G0200 Papaver somniferum HOM05D003055 ORTHO05D004002 2.7e-51 205.7 129 86.0
MD15G1404000 Malus domestica HOM05D003055 ORTHO05D004002 3.6e-51 205.3 130 82.3
GSVIVG01033955001 Vitis vinifera HOM05D003055 ORTHO05D004002 3.6e-51 205.3 128 82.0
Lj3C923T8 Lonicera japonica HOM05D003055 ORTHO05D004002 4.7e-51 204.9 128 82.8
TWI63G0716 Tripterygium wilfordii HOM05D003055 ORTHO05D004002 4.7e-51 204.9 130 81.5
Actinidia31111 Actinidia chinensis HOM05D003055 ORTHO05D004002 6.1e-51 204.5 130 83.8
MSTRG.9034 Avicennia marina HOM05D003055 ORTHO05D004002 8.0e-51 204.1 128 83.6
CANSAT56G0108 Cannabis sativa HOM05D003055 ORTHO05D004002 8.0e-51 204.1 127 83.5
HanXRQChr05g0162021 Helianthus annuus HOM05D003055 ORTHO05D004002 8.0e-51 204.1 129 80.6
Nn2g14302 Nelumbo nucifera HOM05D003055 ORTHO05D004002 8.0e-51 204.1 130 85.4
Lalb_Chr06g0169871 Lupinus albus HOM05D003055 ORTHO05D004002 1.0e-50 203.8 129 81.4
Manes.10G060100 Manihot esculenta HOM05D003055 ORTHO05D004002 1.0e-50 203.8 130 82.3
arahy.Tifrunner.gnm1.ann1.3L4KIC Arachis hypogaea HOM05D003055 ORTHO05D004002 1.4e-50 203.4 130 82.3
arahy.Tifrunner.gnm1.ann1.V7K45W Arachis hypogaea HOM05D003055 ORTHO05D004002 1.4e-50 203.4 130 82.3
MD08G1216900 Malus domestica HOM05D003055 ORTHO05D004002 1.8e-50 203.0 130 81.5
Lj5g0005985 Lotus japonicus HOM05D003055 ORTHO05D004002 2.3e-50 202.6 130 81.5
ECA238G1602 Erigeron canadensis HOM05D003055 ORTHO05D004002 3.0e-50 202.2 129 79.1
unitig_748.g8765 Utricularia gibba HOM05D003055 ORTHO05D004002 3.9e-50 201.8 130 83.1
Medtr1g090490 Medicago truncatula HOM05D003055 ORTHO05D004002 5.2e-50 201.4 130 83.1
TPR.G37809 Trifolium pratense HOM05D003055 ORTHO05D004002 6.7e-50 201.1 130 83.8
GSVIVG01034626001 Vitis vinifera HOM05D003055 ORTHO05D004002 8.8e-50 200.7 130 79.2
QL04p047928 Quercus lobata HOM05D003055 ORTHO05D004002 2.0e-49 199.5 129 82.2
QL04p047935 Quercus lobata HOM05D003055 ORTHO05D004002 2.0e-49 199.5 129 82.2
HanXRQChr02g0053561 Helianthus annuus HOM05D003055 ORTHO05D004002 2.6e-49 199.1 127 80.3
MELO3C012333.2 Cucumis melo HOM05D003055 ORTHO05D004002 3.3e-49 198.7 155 71.0
Ca_10428_v3 Cicer arietinum L. HOM05D003055 ORTHO05D004002 4.4e-49 198.4 130 82.3
Sed0009816 Sechium edule HOM05D003055 ORTHO05D004002 7.4e-49 197.6 130 81.5
ECA232G4887 Erigeron canadensis HOM05D003055 ORTHO05D004002 1.3e-48 196.8 127 78.0
HanXRQChr05g0146171 Helianthus annuus HOM05D003055 ORTHO05D004002 1.3e-48 196.8 129 76.0
Lsat_1_v5_gn_0_21121 Lactuca sativa HOM05D003055 ORTHO05D004002 1.3e-48 196.8 128 79.7
DCAR_011995 Daucus carota HOM05D003055 ORTHO05D004002 1.7e-48 196.4 142 76.8
AT3G10640 Arabidopsis thaliana HOM05D003055 ORTHO05D004002 2.2e-48 196.1 129 77.5
HPP92_020108 Vanilla planifolia HOM05D003055 ORTHO05D004002 2.2e-48 196.1 130 81.5
Ciclev10016516m.g Citrus clementina HOM05D003055 ORTHO05D004002 2.8e-48 195.7 129 81.4
Psat6g171920 Pisum sativum HOM05D003055 ORTHO05D004002 2.8e-48 195.7 130 80.0
Rhsim03G0096100 Rhododendron simsii HOM05D003055 ORTHO05D004002 2.8e-48 195.7 130 79.2
Sabra08G0011900 Salix brachista HOM05D003055 ORTHO05D004002 3.7e-48 195.3 129 79.8
CAN.G143.38 Capsicum annuum HOM05D003055 ORTHO05D004002 4.8e-48 194.9 128 81.2
Carub.0003s0987 Capsella rubella HOM05D003055 ORTHO05D004002 6.3e-48 194.5 129 76.7
Eucgr.J00289 Eucalyptus grandis HOM05D003055 ORTHO05D004002 8.2e-48 194.1 129 79.8
AT5G04850 Arabidopsis thaliana HOM05D003055 ORTHO05D004002 1.1e-47 193.7 130 79.2
CDE06G1856 Ceratophyllum demersum HOM05D003055 ORTHO05D004002 1.4e-47 193.4 129 76.7
Atru.chr12.1074 Acer truncatum HOM05D003055 ORTHO05D004002 1.8e-47 193.0 130 79.2
Gohir.D05G288200 Gossypium hirsutum HOM05D003055 ORTHO05D004002 1.8e-47 193.0 131 80.2
Lalb_Chr02g0150941 Lupinus albus HOM05D003055 ORTHO05D004002 1.8e-47 193.0 129 79.1
CAN.G1433.3 Capsicum annuum HOM05D003055 ORTHO05D004002 2.4e-47 192.6 130 78.5
CDE08G0531 Ceratophyllum demersum HOM05D003055 ORTHO05D004002 2.4e-47 192.6 129 76.0
Gohir.A05G287100 Gossypium hirsutum HOM05D003055 ORTHO05D004002 2.4e-47 192.6 131 80.2
Peaxi162Scf00120g01529 Petunia axillaris HOM05D003055 ORTHO05D004002 2.4e-47 192.6 130 80.8
TWI38G0789 Tripterygium wilfordii HOM05D003055 ORTHO05D004002 2.4e-47 192.6 130 76.9
COL.COLO4_07818 Corchorus olitorius HOM05D003055 ORTHO05D004002 3.1e-47 192.2 131 80.9
Duzib106G1693 Durio zibethinus HOM05D003055 ORTHO05D004002 3.1e-47 192.2 131 80.2
Nitab4.5_0000687g0220 Nicotiana tabacum HOM05D003055 ORTHO05D004002 3.1e-47 192.2 130 77.7
GSVIVG01034624001 Vitis vinifera HOM05D003055 ORTHO05D004002 3.1e-47 192.2 130 76.2
Carub.0006s0376 Capsella rubella HOM05D003055 ORTHO05D004002 7.0e-47 191.0 130 78.5
Sc09g0005090 Simmondsia chinensis HOM05D003055 ORTHO05D004002 9.1e-47 190.7 129 76.7
BcaC06g32192 Brassica carinata HOM05D003055 ORTHO05D004002 1.2e-46 190.3 132 75.8
Thhalv10021438m.g Eutrema salsugineum HOM05D003055 ORTHO05D004002 1.2e-46 190.3 129 76.7
Gorai.009G303200 Gossypium raimondii HOM05D003055 ORTHO05D004002 1.2e-46 190.3 132 78.8
Nitab4.5_0009933g0030 Nicotiana tabacum HOM05D003055 ORTHO05D004002 1.2e-46 190.3 130 80.0
Solyc05g055170.3 Solanum lycopersicum HOM05D003055 ORTHO05D004002 1.2e-46 190.3 130 76.9
Solyc11g006500.2 Solanum lycopersicum HOM05D003055 ORTHO05D004002 1.2e-46 190.3 129 79.1
Sopen05g033590 Solanum pennellii HOM05D003055 ORTHO05D004002 1.2e-46 190.3 130 76.9
Sopen11g002390 Solanum pennellii HOM05D003055 ORTHO05D004002 1.2e-46 190.3 129 79.1
PGSC0003DMG402001984 Solanum tuberosum HOM05D003055 ORTHO05D004002 1.2e-46 190.3 129 79.1
Rhsim09G0140900 Rhododendron simsii HOM05D003055 ORTHO05D004002 1.6e-46 189.9 111 89.2
SEGI_13785 Sequoiadendron giganteum HOM05D003055 ORTHO05D004002 2.6e-46 189.1 129 73.6
Thecc.10G117200 Theobroma cacao HOM05D003055 ORTHO05D004002 3.5e-46 188.7 132 78.8
CARHR085220 Cardamine hirsuta HOM05D003055 ORTHO05D004002 7.7e-46 187.6 129 75.2
Thhalv10014559m.g Eutrema salsugineum HOM05D003055 ORTHO05D004002 1.0e-45 187.2 129 76.7
Nitab4.5_0001781g0200 Nicotiana tabacum HOM05D003055 ORTHO05D004002 1.0e-45 187.2 130 79.2
AL6G14520 Arabidopsis lyrata HOM05D003055 ORTHO05D004002 1.3e-45 186.8 130 76.9
AL3G22110 Arabidopsis lyrata HOM05D003055 ORTHO05D004002 2.2e-45 186.0 129 75.2
Sp3g08950 Schrenkiella parvula HOM05D003055 ORTHO05D004002 2.2e-45 186.0 129 74.4
Haze_03463 Corylus avellana HOM05D003055 ORTHO05D004002 2.9e-45 185.7 180 61.1
Aa31LG11G5860 Aethionema arabicum HOM05D003055 ORTHO05D004002 5.0e-45 184.9 129 77.5
FAN10G0605 Fragaria x ananassa HOM05D003055 ORTHO05D004002 5.0e-45 184.9 115 83.5
Peaxi162Scf00519g00041 Petunia axillaris HOM05D003055 ORTHO05D004002 8.5e-45 184.1 130 76.2
BolC9t59944H Brassica oleracea HOM05D003055 ORTHO05D004002 1.1e-44 183.7 133 73.7
PGSC0003DMG400023399 Solanum tuberosum HOM05D003055 ORTHO05D004002 1.1e-44 183.7 130 76.2
C03p44300 Brassica napus HOM05D003055 ORTHO05D004002 2.5e-44 182.6 130 75.4
Os05g0102900 Oryza sativa ssp. japonica HOM05D003055 ORTHO05D004002 2.5e-44 182.6 130 74.6
vmacro07271 Vaccinium macrocarpon HOM05D003055 ORTHO05D004002 2.5e-44 182.6 155 66.5
A03p01880 Brassica napus HOM05D003055 ORTHO05D004002 3.2e-44 182.2 131 74.0
C03p02250 Brassica napus HOM05D003055 ORTHO05D004002 3.2e-44 182.2 131 74.0
BolC3t12776H Brassica oleracea HOM05D003055 ORTHO05D004002 3.2e-44 182.2 131 74.0
Os01g0103000 Oryza sativa ssp. japonica HOM05D003055 ORTHO05D004002 3.2e-44 182.2 129 76.7
A03p36660 Brassica napus HOM05D003055 ORTHO05D004002 4.2e-44 181.8 130 74.6
A10p31330 Brassica napus HOM05D003055 ORTHO05D004002 5.5e-44 181.4 132 74.2
C09p71970 Brassica napus HOM05D003055 ORTHO05D004002 5.5e-44 181.4 132 74.2
BraA03t12830Z Brassica rapa HOM05D003055 ORTHO05D004002 5.5e-44 181.4 130 74.6
Sp6g37980 Schrenkiella parvula HOM05D003055 ORTHO05D004002 1.2e-43 180.3 132 74.2
Actinidia34062 Actinidia chinensis HOM05D003055 ORTHO05D004002 1.6e-43 179.9 130 75.4
BcaC01g04169 Brassica carinata HOM05D003055 ORTHO05D004002 1.6e-43 179.9 130 73.8
BolC3t16700H Brassica oleracea HOM05D003055 ORTHO05D004002 1.6e-43 179.9 130 73.8
SGA_v2.0_scaffold278G46757 Striga asiatica HOM05D003055 ORTHO05D004002 3.6e-43 178.7 142 71.1
Hund06807 Selenicereus undatus HOM05D003055 ORTHO05D004002 1.0e-42 177.2 130 71.5
Zm00001eb267590 Zea mays HOM05D003055 ORTHO05D004002 8.8e-42 174.1 127 74.0
AUR62034167 Chenopodium quinoa HOM05D003055 ORTHO05D004002 1.2e-41 173.7 127 72.4
AUR62034489 Chenopodium quinoa HOM05D003055 ORTHO05D004002 1.2e-41 173.7 127 72.4
EL10Ac4g08721 Beta vulgaris HOM05D003055 ORTHO05D004002 2.0e-41 172.9 130 73.8
Mapoly0113s0057 Marchantia polymorpha HOM05D003055 ORTHO05D004002 2.6e-41 172.6 128 73.4
Ah.04g162540 Amaranthus hybridus HOM05D003055 ORTHO05D004002 3.4e-41 172.2 129 72.9
BcaB01g05917 Brassica carinata HOM05D003055 ORTHO05D004002 3.4e-41 172.2 130 73.1
PGR044G1056 Punica granatum HOM05D003055 ORTHO05D004002 4.4e-41 171.8 161 63.4
CARHR208430 Cardamine hirsuta HOM05D003055 ORTHO05D004002 1.7e-40 169.9 129 72.1
SMO118G0011 Selaginella moellendorffii HOM05D003055 ORTHO05D004002 4.8e-40 168.3 129 72.1
Cpa.g.sc694.2 Carica papaya HOM05D003055 ORTHO05D004002 2.4e-39 166.0 110 81.8
Zm00001eb126990 Zea mays HOM05D003055 ORTHO05D004002 9.1e-39 164.1 129 71.3
Gohir.D10G203800 Gossypium hirsutum HOM05D003055 ORTHO05D004002 2.0e-38 162.9 130 71.5
Gorai.011G228600 Gossypium raimondii HOM05D003055 ORTHO05D004002 2.0e-38 162.9 130 70.8
Gohir.A10G196700 Gossypium hirsutum HOM05D003055 ORTHO05D004002 2.7e-38 162.5 130 70.8
Nn8g39931 Nelumbo nucifera HOM05D003055 ORTHO05D004002 2.7e-38 162.5 108 83.3
BcaNung05152 Brassica carinata HOM05D003055 ORTHO05D004002 2.2e-37 159.5 112 75.0
Pp3c27_2180 Physcomitrium patens HOM05D003055 ORTHO05D004002 1.5e-36 156.8 128 66.4
Pp3c27_2240 Physcomitrium patens HOM05D003055 ORTHO05D004002 1.5e-36 156.8 128 66.4
MBI19_g44564_MAGBIO Magnolia biondii HOM05D003055 ORTHO05D004002 4.0e-34 148.7 113 71.7
CBR_g38017 Chara braunii HOM05D003055 ORTHO05D004002 2.8e-32 142.5 133 59.4
Lsat_1_v5_gn_0_22560 Lactuca sativa HOM05D003055 ORTHO05D004002 4.1e-31 138.7 113 61.1
Hund22266 Selenicereus undatus HOM05D003055 ORTHO05D004002 1.3e-29 133.7 105 70.5
Lsat_1_v5_gn_1_80080 Lactuca sativa HOM05D003055 ORTHO05D004002 3.8e-29 132.1 162 50.6
Nitab4.5_0011469g0020 Nicotiana tabacum HOM05D003055 ORTHO05D004002 1.9e-28 129.8 129 60.5
SEGI_31513 Sequoiadendron giganteum HOM05D003055 ORTHO05D004002 8.9e-26 120.9 125 52.0
ATR0772G188 Amborella trichopoda HOM05D003055 ORTHO05D004002 1.2e-25 120.6 105 64.8
Lsat_1_v5_gn_0_39180 Lactuca sativa HOM05D003055 ORTHO05D004002 1.2e-25 120.6 101 64.4
Lsat_1_v5_gn_0_42020 Lactuca sativa HOM05D003055 ORTHO05D004002 1.2e-25 120.6 107 61.7
Duzib114G0839 Durio zibethinus HOM05D003055 ORTHO05D004002 4.4e-25 118.6 99 66.7
Lsat_1_v5_gn_3_109540 Lactuca sativa HOM05D003055 ORTHO05D004002 2.2e-24 116.3 105 60.0
Lsat_1_v5_gn_6_1380 Lactuca sativa HOM05D003055 ORTHO05D004002 7.8e-22 107.8 105 57.1
Actinidia34733 Actinidia chinensis HOM05D003055 ORTHO05D004002 1.9e-20 103.2 72 73.6
BraA03t09558Z Brassica rapa HOM05D003055 ORTHO05D004002 3.3e-20 102.4 58 89.7
PRCOL_00000670 Prasinoderma coloniale HOM05D003055 ORTHO05D004002 6.1e-19 98.2 121 49.6
MCO07G102 Micromonas commoda HOM05D003055 ORTHO05D004002 5.2e-18 95.1 106 53.8
AagrBONN_evm.TU.Sc2ySwM_362.2861 Anthoceros agrestis HOM05D003055 ORTHO05D004002 2.0e-17 93.2 58 82.8
Rhsim09G0141300 Rhododendron simsii HOM05D003055 ORTHO05D339782 5.8e-17 91.7 75 69.3
Lalb_Chr21g0312801 Lupinus albus HOM05D003055 ORTHO05D004002 1.7e-16 90.1 57 78.9
Cre13.g577950 Chlamydomonas reinhardtii HOM05D003055 ORTHO05D004002 2.2e-16 89.7 104 50.0
MBI18_g25924_MAGBIO Magnolia biondii HOM05D003055 ORTHO05D004002 3.6e-11 72.4 52 69.2
CSS0032406 Camellia sinensis var. sinensis HOM05D003055 ORTHO05D004002 1.8e-10 70.1 104 47.1
Lsat_1_v5_gn_5_70341 Lactuca sativa HOM05D003055 ORTHO05D004002 5.2e-10 68.6 41 82.9
Lsat_1_v5_gn_6_22060 Lactuca sativa HOM05D003055 ORTHO05D004002 2.6e-09 66.2 41 78.0
CSS0049378 Camellia sinensis var. sinensis HOM05D003055 ORTHO05D004002 5.8e-09 65.1 127 46.5
BcaC07g37613 Brassica carinata HOM05D003055 ORTHO05D024164 7.5e-09 64.7 65 50.8
Cfa027048 Carpinus fangiana HOM05D003055 ORTHO05D004002 2.9e-08 62.8 67 50.7
Pp3c16_16920 Physcomitrium patens HOM05D003055 ORTHO05D004002 2.1e-06 56.6 105 41.0


User provided reference genes

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