Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0610 Trochodendron aralioides HOM05D006179 ORTHO05D008370 5.7e-172 607.4 300 100.0
QL01p016926 Quercus lobata HOM05D006179 ORTHO05D008370 1.4e-122 443.4 299 73.9
GSVIVG01037292001 Vitis vinifera HOM05D006179 ORTHO05D008370 2.1e-121 439.5 300 74.3
CiPaw.14G111900 Carya illinoinensis HOM05D006179 ORTHO05D008370 2.1e-118 429.5 300 72.0
Cfa009884 Carpinus fangiana HOM05D006179 ORTHO05D008370 5.3e-117 424.9 301 71.1
Potri.009G069300 Populus trichocarpa HOM05D006179 ORTHO05D008370 1.3e-115 420.2 304 72.0
Nn2g14782 Nelumbo nucifera HOM05D006179 ORTHO05D008370 1.7e-115 419.9 300 71.3
Prupe.4G263800 Prunus persica HOM05D006179 ORTHO05D008370 1.9e-114 416.4 301 71.1
PGR119G2402 Punica granatum HOM05D006179 ORTHO05D008370 6.0e-113 411.4 308 69.5
Atru.chr3.2957 Acer truncatum HOM05D006179 ORTHO05D008370 7.9e-113 411.0 301 69.1
RcHm_v2.0_Chr5g0050451 Rosa chinensis HOM05D006179 ORTHO05D008370 2.4e-109 399.4 301 69.1
Sabra09G0052200 Salix brachista HOM05D006179 ORTHO05D008370 6.9e-109 397.9 346 62.4
Thecc.09G246900 Theobroma cacao HOM05D006179 ORTHO05D008370 7.6e-108 394.4 356 58.7
COL.COLO4_24491 Corchorus olitorius HOM05D006179 ORTHO05D008370 2.2e-107 392.9 302 63.9
CSS0020940 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.8e-107 392.1 312 67.3
Rhsim01G0195300 Rhododendron simsii HOM05D006179 ORTHO05D008370 2.5e-106 389.4 315 65.1
CANSAT54G1770 Cannabis sativa HOM05D006179 ORTHO05D008370 3.5e-105 385.6 301 64.8
MD11G1184200 Malus domestica HOM05D006179 ORTHO05D008370 4.6e-105 385.2 281 70.8
Haze_23248 Corylus avellana HOM05D006179 ORTHO05D008370 1.0e-104 384.0 395 53.7
CDE02G1620 Ceratophyllum demersum HOM05D006179 ORTHO05D008370 1.3e-104 383.6 302 67.2
vmacro14276 Vaccinium macrocarpon HOM05D006179 ORTHO05D008370 1.8e-104 383.3 313 65.5
Hma1.2p1_0470F.1_g159226 Hydrangea macrophylla HOM05D006179 ORTHO05D008370 3.9e-104 382.1 294 68.7
PSO384G2846 Papaver somniferum HOM05D006179 ORTHO05D008370 3.9e-104 382.1 303 65.7
Gohir.A07G121100 Gossypium hirsutum HOM05D006179 ORTHO05D008370 1.1e-103 380.6 300 65.0
Solyc12g099800.2 Solanum lycopersicum HOM05D006179 ORTHO05D008370 1.5e-103 380.2 307 65.8
TWI79G0794 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.9e-103 379.8 303 66.7
Gohir.D07G125300 Gossypium hirsutum HOM05D006179 ORTHO05D008370 2.5e-103 379.4 300 65.0
ClCG02G022800 Citrullus lanatus HOM05D006179 ORTHO05D008370 4.3e-103 378.6 312 65.1
Lalb_Chr04g0249261 Lupinus albus HOM05D006179 ORTHO05D008370 4.3e-103 378.6 300 65.0
Sopen12g034430 Solanum pennellii HOM05D006179 ORTHO05D008370 5.7e-103 378.3 307 65.5
LjContig00564g0004002 Lotus japonicus HOM05D006179 ORTHO05D008370 9.7e-103 377.5 305 65.9
PSO339G0647 Papaver somniferum HOM05D006179 ORTHO05D008370 1.6e-102 376.7 301 65.4
FvH4_3g27810 Fragaria vesca HOM05D006179 ORTHO05D008370 4.8e-102 375.2 302 66.9
Nn7g36750 Nelumbo nucifera HOM05D006179 ORTHO05D008370 6.3e-102 374.8 232 78.0
PGSC0003DMG401004716 Solanum tuberosum HOM05D006179 ORTHO05D008370 6.3e-102 374.8 225 78.7
Lj2C622G16 Lonicera japonica HOM05D006179 ORTHO05D008370 8.2e-102 374.4 340 59.1
Glyma.02G279000 Glycine max HOM05D006179 ORTHO05D008370 1.1e-101 374.0 296 66.2
Sed0005347 Sechium edule HOM05D006179 ORTHO05D008370 2.4e-101 372.9 302 65.6
Nitab4.5_0001290g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 5.3e-101 371.7 226 78.3
arahy.Tifrunner.gnm1.ann1.66DN5N Arachis hypogaea HOM05D006179 ORTHO05D008370 9.0e-101 370.9 250 72.4
ATR0621G006 Amborella trichopoda HOM05D006179 ORTHO05D008370 1.2e-100 370.5 232 75.0
Glyma.14G035700 Glycine max HOM05D006179 ORTHO05D008370 1.2e-100 370.5 300 64.7
TWI31G1173 Tripterygium wilfordii HOM05D006179 ORTHO05D008370 1.2e-100 370.5 303 65.3
Psat2g020720 Pisum sativum HOM05D006179 ORTHO05D008370 1.5e-100 370.2 295 64.1
Aqoxy1G00395 Aquilegia oxysepala HOM05D006179 ORTHO05D008370 3.4e-100 369.0 302 65.2
EL10Ac4g10106 Beta vulgaris HOM05D006179 ORTHO05D008370 3.4e-100 369.0 313 63.3
TPR.G16411 Trifolium pratense HOM05D006179 ORTHO05D008370 3.4e-100 369.0 266 68.8
FAN25G1664 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.3e-99 367.1 301 66.8
Oeu061700.1 Olea europaea HOM05D006179 ORTHO05D008370 2.9e-99 365.9 226 79.2
Phvul.008G201800 Phaseolus vulgaris HOM05D006179 ORTHO05D008370 2.9e-99 365.9 249 72.3
Ah.04g159740 Amaranthus hybridus HOM05D006179 ORTHO05D008370 8.5e-99 364.4 235 73.6
Medtr5g089330 Medicago truncatula HOM05D006179 ORTHO05D008370 1.4e-98 363.6 307 63.2
SGA_v2.0_scaffold8G04541 Striga asiatica HOM05D006179 ORTHO05D008370 1.4e-98 363.6 226 77.0
Gorai.001G135100 Gossypium raimondii HOM05D006179 ORTHO05D008370 1.9e-98 363.2 239 74.9
arahy.Tifrunner.gnm1.ann1.0RM1GA Arachis hypogaea HOM05D006179 ORTHO05D008370 2.5e-98 362.8 256 70.3
Ca_06199_v3 Cicer arietinum L. HOM05D006179 ORTHO05D008370 3.2e-98 362.5 230 74.3
VMungo0647G1137 Vigna mungo HOM05D006179 ORTHO05D008370 5.5e-98 361.7 297 65.0
HanXRQChr13g0390131 Helianthus annuus HOM05D006179 ORTHO05D008370 1.2e-97 360.5 307 63.5
SalBow6G4024 Salvia bowleyana HOM05D006179 ORTHO05D008370 1.6e-97 360.1 298 63.8
Atru.chr3.2952 Acer truncatum HOM05D006179 ORTHO05D008370 2.1e-97 359.8 274 67.9
Cc00_g17410 Coffea canephora HOM05D006179 ORTHO05D008370 2.7e-97 359.4 235 74.9
Hund21973 Selenicereus undatus HOM05D006179 ORTHO05D008370 4.6e-97 358.6 265 67.5
Migut.D00669 Erythranthe guttata HOM05D006179 ORTHO05D008370 6.1e-97 358.2 312 62.8
AUR62000204 Chenopodium quinoa HOM05D006179 ORTHO05D008370 2.3e-96 356.3 226 73.5
Os07g0687500 Oryza sativa ssp. japonica HOM05D006179 ORTHO05D008370 2.3e-96 356.3 290 62.8
Zm00001eb331180 Zea mays HOM05D006179 ORTHO05D008370 3.9e-96 355.5 271 65.3
Cpa.g.sc157.57 Carica papaya HOM05D006179 ORTHO05D008370 7.4e-95 351.3 304 62.2
Duzib170G0239 Durio zibethinus HOM05D006179 ORTHO05D008370 9.7e-95 350.9 302 61.9
CAN.G1305.17 Capsicum annuum HOM05D006179 ORTHO05D008370 1.3e-94 350.5 272 65.8
AUR62006552 Chenopodium quinoa HOM05D006179 ORTHO05D008370 4.8e-94 348.6 234 70.1
Sc16g0011000 Simmondsia chinensis HOM05D006179 ORTHO05D008370 8.2e-94 347.8 222 73.9
Peaxi162Scf00272g00828 Petunia axillaris HOM05D006179 ORTHO05D008370 3.1e-93 345.9 201 79.1
TPR.G16393 Trifolium pratense HOM05D006179 ORTHO05D008370 2.2e-91 339.7 277 60.3
unitig_62.g23875 Utricularia gibba HOM05D006179 ORTHO05D008370 8.5e-91 337.8 223 72.2
FAN21G1036 Fragaria x ananassa HOM05D006179 ORTHO05D008370 1.1e-90 337.4 302 62.9
Lsat_1_v5_gn_5_65341 Lactuca sativa HOM05D006179 ORTHO05D008370 1.9e-90 336.7 290 62.4
FAN11G2659 Fragaria x ananassa HOM05D000059 ORTHO05D008370 2.7e-89 332.8 275 66.5
CARHR193590 Cardamine hirsuta HOM05D006179 ORTHO05D008370 6.3e-86 321.6 303 57.8
Sp6g25040 Schrenkiella parvula HOM05D006179 ORTHO05D008370 3.1e-85 319.3 305 55.7
Thhalv10014227m.g Eutrema salsugineum HOM05D006179 ORTHO05D008370 2.0e-84 316.6 305 55.1
DCAR_024400 Daucus carota HOM05D006179 ORTHO05D008370 1.3e-83 313.9 221 69.7
MELO3C014557.2 Cucumis melo HOM05D006179 ORTHO05D008370 2.2e-83 313.2 275 60.7
HPP92_028459 Vanilla planifolia HOM05D006179 ORTHO05D008370 1.9e-82 310.1 182 79.1
THA.LOC104811194 Tarenaya hassleriana HOM05D006179 ORTHO05D008370 4.2e-82 308.9 314 53.5
Aa31LG1G8830 Aethionema arabicum HOM05D006179 ORTHO05D008370 5.5e-82 308.5 304 54.6
C03p11040 Brassica napus HOM05D006179 ORTHO05D008370 4.7e-81 305.4 309 55.7
BcaB01g04864 Brassica carinata HOM05D006179 ORTHO05D008370 1.8e-80 303.5 303 55.4
BolC3t13573H Brassica oleracea HOM05D006179 ORTHO05D008370 1.8e-80 303.5 309 55.7
A03p09460 Brassica napus HOM05D006179 ORTHO05D008370 2.3e-80 303.1 307 55.4
BraA03t10264Z Brassica rapa HOM05D006179 ORTHO05D008370 2.3e-80 303.1 307 55.4
CsaV3_6G038930 Cucumis sativus L. HOM05D006179 ORTHO05D008370 2.3e-80 303.1 259 62.9
A02p05510 Brassica napus HOM05D006179 ORTHO05D008370 3.0e-80 302.8 300 55.0
AT5G19370 Arabidopsis thaliana HOM05D006179 ORTHO05D008370 3.3e-79 299.3 300 53.7
BcaC03g13669 Brassica carinata HOM05D006179 ORTHO05D008370 9.7e-79 297.7 284 57.0
Nitab4.5_0002310g0120 Nicotiana tabacum HOM05D006179 ORTHO05D008370 4.8e-78 295.4 312 54.8
AL6G30860 Arabidopsis lyrata HOM05D006179 ORTHO05D008370 1.1e-77 294.3 306 52.6
SMO145G0007 Selaginella moellendorffii HOM05D006179 ORTHO05D008370 1.1e-77 294.3 227 60.8
BraA02t05502Z Brassica rapa HOM05D006179 ORTHO05D008370 1.8e-77 293.5 324 50.9
Mapoly0003s0043 Marchantia polymorpha HOM05D006179 ORTHO05D008370 2.4e-77 293.1 228 60.5
Dinv36157 Davidia involucrata HOM05D006179 ORTHO05D008370 7.0e-77 291.6 223 69.5
Carub.0006s1771 Capsella rubella HOM05D006179 ORTHO05D008370 3.5e-76 289.3 309 52.4
BNapus_Darmor_BZH_scaffold_38p02550 Brassica napus HOM05D006179 ORTHO05D008370 1.1e-74 284.3 275 56.4
Pp3c3_13280 Physcomitrium patens HOM05D006179 ORTHO05D008370 7.2e-74 281.6 303 52.8
Eucgr.J00687 Eucalyptus grandis HOM05D006179 ORTHO05D008370 4.7e-73 278.9 151 84.1
Ciclev10017644m.g Citrus clementina HOM05D006179 ORTHO05D008370 8.8e-72 274.6 151 83.4
AagrBONN_evm.TU.Sc2ySwM_117.3174 Anthoceros agrestis HOM05D006179 ORTHO05D008370 8.3e-70 268.1 226 57.5
BcaB01g05143 Brassica carinata HOM05D006179 ORTHO05D008370 8.3e-70 268.1 179 69.8
CBR_g54969 Chara braunii HOM05D006179 ORTHO05D008370 1.6e-68 263.8 220 58.6
ECA233G4787 Erigeron canadensis HOM05D006179 ORTHO05D008370 1.3e-62 244.2 143 78.3
Manes.02G138400 Manihot esculenta HOM05D006179 ORTHO05D008370 1.2e-60 237.7 224 61.6
Peaxi162Scf00174g00223 Petunia axillaris HOM05D006179 ORTHO05D008370 5.6e-58 228.8 152 72.4
SEGI_16296 Sequoiadendron giganteum HOM05D006179 ORTHO05D008370 1.8e-56 223.8 138 74.6
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.6e-52 210.7 180 63.9
AUR62040469 Chenopodium quinoa HOM05D006179 ORTHO05D008370 6.6e-51 205.3 145 66.9
AUR62037598 Chenopodium quinoa HOM05D006179 ORTHO05D007344 1.7e-46 190.7 143 65.7
AUR62042212 Chenopodium quinoa HOM05D006179 ORTHO05D008370 1.1e-40 171.4 136 63.2
Cre07.g350400 Chlamydomonas reinhardtii HOM05D006179 ORTHO05D008370 4.9e-38 162.5 178 39.9
MCO13G336 Micromonas commoda HOM05D006179 ORTHO05D008370 2.1e-33 147.1 198 39.9
SalBow6G2129 Salvia bowleyana HOM05D006179 ORTHO05D353266 5.4e-29 132.5 231 41.1
CSS0040024 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 1.0e-19 101.7 68 70.6
CSS0040434 Camellia sinensis var. sinensis HOM05D006179 ORTHO05D008370 3.0e-19 100.1 137 44.5
QL02p019212 Quercus lobata HOM05D006179 ORTHO05D008370 6.2e-09 65.9 36 77.8
Haze_26617 Corylus avellana HOM05D006179 ORTHO05D164269 1.4e-08 64.7 96 40.6
MCO16G521 Micromonas commoda HOM05D005637 ORTHO05D006983 2.4e-08 63.9 100 39.0
Haze_07302 Corylus avellana HOM05D005637 ORTHO05D006983 3.8e-06 56.6 78 34.6
C03p72380 Brassica napus HOM05D005637 ORTHO05D006983 4.9e-06 56.2 62 43.5
BolC3t19533H Brassica oleracea HOM05D005637 ORTHO05D006983 4.9e-06 56.2 62 43.5
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 8.4e-06 55.5 63 41.3
Ciclev10022740m.g Citrus clementina HOM05D005637 ORTHO05D006983 8.4e-06 55.5 58 41.4
Sc04g0002850 Simmondsia chinensis HOM05D005637 ORTHO05D006983 8.4e-06 55.5 58 41.4


User provided reference genes

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