Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0609 Trochodendron aralioides HOM05D007559 ORTHO05D009642 4.7e-58 229.2 113 100.0
TAR623G0780 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.4e-57 227.6 113 99.1
TAR623G1207 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.4e-57 227.6 113 99.1
TAR623G1276 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.2e-50 204.5 106 93.4
Nn2g13304 Nelumbo nucifera HOM05D007559 ORTHO05D009642 1.7e-31 141.0 109 65.1
Aqoxy2G02373 Aquilegia oxysepala HOM05D007559 ORTHO05D009642 2.3e-28 130.6 109 60.6
Cfa017088 Carpinus fangiana HOM05D007559 ORTHO05D009642 2.3e-28 130.6 113 58.4
Haze_21112 Corylus avellana HOM05D007559 ORTHO05D009642 3.0e-28 130.2 113 58.4
TWI77G1038 Tripterygium wilfordii HOM05D007559 ORTHO05D009642 1.5e-27 127.9 113 59.3
Sabra06G0082800 Salix brachista HOM05D007559 ORTHO05D009642 2.5e-27 127.1 113 57.5
Glyma.09G279300 Glycine max HOM05D007559 ORTHO05D009642 4.3e-27 126.3 113 55.8
Potri.006G106400 Populus trichocarpa HOM05D007559 ORTHO05D009642 3.7e-26 123.2 113 55.8
Ca_07735_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.8e-25 120.9 113 54.0
Psat3g121880 Pisum sativum HOM05D007559 ORTHO05D009642 1.8e-25 120.9 113 53.1
Lj2C64T2 Lonicera japonica HOM05D007559 ORTHO05D009642 3.1e-25 120.2 113 56.6
Dinv35437 Davidia involucrata HOM05D007559 ORTHO05D009642 9.0e-25 118.6 106 59.4
VMungo1383G3445 Vigna mungo HOM05D007559 ORTHO05D009642 2.0e-24 117.5 111 53.2
Eucgr.A00644 Eucalyptus grandis HOM05D007559 ORTHO05D009642 2.6e-24 117.1 113 53.1
Phvul.009G202600 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 3.4e-24 116.7 108 53.7
Glyma.18G209700 Glycine max HOM05D007559 ORTHO05D009642 4.5e-24 116.3 113 54.0
FAN05G3361 Fragaria x ananassa HOM05D007559 ORTHO05D009642 5.8e-24 115.9 113 52.2
FAN09G3233 Fragaria x ananassa HOM05D007559 ORTHO05D009642 7.6e-24 115.5 110 52.7
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 7.6e-24 115.5 116 54.3
PSO339G0892 Papaver somniferum HOM05D007559 ORTHO05D009642 1.0e-23 115.2 115 56.5
Medtr7g072070 Medicago truncatula HOM05D007559 ORTHO05D009642 1.7e-23 114.4 109 53.2
Phvul.008G089500 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 1.7e-23 114.4 109 52.3
MD12G1182800 Malus domestica HOM05D007559 ORTHO05D009642 2.9e-23 113.6 103 57.3
Ciclev10013613m.g Citrus clementina HOM05D007559 ORTHO05D009642 4.9e-23 112.8 110 57.3
Sed0024504 Sechium edule HOM05D007559 ORTHO05D009642 4.9e-23 112.8 111 48.6
DCAR_028899 Daucus carota HOM05D007559 ORTHO05D009642 6.5e-23 112.5 113 53.1
Prupe.6G287300 Prunus persica HOM05D007559 ORTHO05D009642 6.5e-23 112.5 103 55.3
Lalb_Chr05g0229371 Lupinus albus HOM05D007559 ORTHO05D009642 8.4e-23 112.1 109 51.4
MD04G1169100 Malus domestica HOM05D007559 ORTHO05D009642 8.4e-23 112.1 112 51.8
TPR.G18675 Trifolium pratense HOM05D007559 ORTHO05D009642 8.4e-23 112.1 113 51.3
CANSAT35G1217 Cannabis sativa HOM05D007559 ORTHO05D009642 1.1e-22 111.7 119 52.9
PSO384G3238 Papaver somniferum HOM05D007559 ORTHO05D009642 1.9e-22 110.9 115 53.9
Gorai.002G267400 Gossypium raimondii HOM05D007559 ORTHO05D009642 2.5e-22 110.5 113 48.7
Lj1g0021884 Lotus japonicus HOM05D007559 ORTHO05D009642 3.2e-22 110.2 109 51.4
Sc02g0000710 Simmondsia chinensis HOM05D007559 ORTHO05D009642 3.2e-22 110.2 113 49.6
FvH4_6g10340 Fragaria vesca HOM05D007559 ORTHO05D009642 4.2e-22 109.8 107 51.4
FAN14G4426 Fragaria x ananassa HOM05D007559 ORTHO05D009642 4.2e-22 109.8 107 51.4
Gohir.A01G230700 Gossypium hirsutum HOM05D007559 ORTHO05D009642 4.2e-22 109.8 113 48.7
CANSAT80G0499 Cannabis sativa HOM05D007559 ORTHO05D009642 5.5e-22 109.4 119 52.1
PGSC0003DMG400026609 Solanum tuberosum HOM05D007559 ORTHO05D009642 2.1e-21 107.5 111 52.3
Manes.09G114100 Manihot esculenta HOM05D007559 ORTHO05D009642 7.9e-21 105.5 108 48.1
MSTRG.5528 Avicennia marina HOM05D007559 ORTHO05D009642 1.0e-20 105.1 113 49.6
FAN09G4021 Fragaria x ananassa HOM05D007559 ORTHO05D009642 1.0e-20 105.1 103 51.5
FAN02G3738 Fragaria x ananassa HOM05D007559 ORTHO05D009642 1.3e-20 104.8 103 51.5
Solyc09g014930.1 Solanum lycopersicum HOM05D007559 ORTHO05D009642 1.8e-20 104.4 110 50.0
Duzib128G0753 Durio zibethinus HOM05D007559 ORTHO05D009642 3.0e-20 103.6 113 49.6
AUR62006326 Chenopodium quinoa HOM05D007559 ORTHO05D009642 3.9e-20 103.2 115 48.7
COL.COLO4_14426 Corchorus olitorius HOM05D007559 ORTHO05D009642 3.9e-20 103.2 113 46.9
CAN.G481.10 Capsicum annuum HOM05D007559 ORTHO05D009642 5.1e-20 102.8 113 48.7
CsaV3_3G033270 Cucumis sativus L. HOM05D007559 ORTHO05D009642 6.7e-20 102.4 112 45.5
Migut.J00080 Erythranthe guttata HOM05D007559 ORTHO05D009642 6.7e-20 102.4 113 46.9
MELO3C031038.2 Cucumis melo HOM05D007559 ORTHO05D009642 8.7e-20 102.1 113 46.9
Atru.chr8.2360 Acer truncatum HOM05D007559 ORTHO05D009642 3.3e-19 100.1 110 50.9
Thecc.05G003800 Theobroma cacao HOM05D007559 ORTHO05D009642 3.3e-19 100.1 113 46.9
SalBow6G7175 Salvia bowleyana HOM05D007559 ORTHO05D009642 1.6e-18 97.8 116 45.7
EL10Ac7g17033 Beta vulgaris HOM05D007559 ORTHO05D009642 2.1e-18 97.4 115 47.0
SHI27995 Sapria himalayana HOM05D007559 ORTHO05D009642 2.1e-18 97.4 113 44.2
Sopen09g007840 Solanum pennellii HOM05D007559 ORTHO05D009642 2.1e-18 97.4 102 51.0
Lsat_1_v5_gn_7_12941 Lactuca sativa HOM05D007559 ORTHO05D009642 2.8e-18 97.1 110 49.1
Nitab4.5_0003592g0030 Nicotiana tabacum HOM05D007559 ORTHO05D009642 1.1e-17 95.1 98 49.0
MBI15_g13921_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 6.9e-17 92.4 89 51.7
Ah.08g209840 Amaranthus hybridus HOM05D007559 ORTHO05D009642 9.0e-17 92.0 115 42.6
QL07p033351 Quercus lobata HOM05D007559 ORTHO05D009642 9.0e-17 92.0 103 47.6
A05p07630 Brassica napus HOM05D007559 ORTHO05D009642 3.4e-16 90.1 113 38.9
MBI02_g41148_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 3.4e-16 90.1 88 50.0
ECA236G1374 Erigeron canadensis HOM05D007559 ORTHO05D009642 5.9e-16 89.4 104 41.3
BraA05t19732Z Brassica rapa HOM05D007559 ORTHO05D009642 7.6e-16 89.0 112 39.3
HanXRQChr12g0363701 Helianthus annuus HOM05D007559 ORTHO05D009642 1.0e-15 88.6 113 43.4
AL4G35690 Arabidopsis lyrata HOM05D007559 ORTHO05D009642 1.3e-15 88.2 113 39.8
BcaB02g09190 Brassica carinata HOM05D007559 ORTHO05D009642 1.3e-15 88.2 113 37.2
SGA_v2.0_scaffold85G26664 Striga asiatica HOM05D007559 ORTHO05D009642 1.3e-15 88.2 111 41.4
Thhalv10017948m.g Eutrema salsugineum HOM05D007559 ORTHO05D009642 1.7e-15 87.8 113 38.9
BolC4t22525H Brassica oleracea HOM05D007559 ORTHO05D009642 2.9e-15 87.0 113 38.1
Nitab4.5_0000047g0060 Nicotiana tabacum HOM05D007559 ORTHO05D009642 3.8e-15 86.7 98 46.9
C04p09160 Brassica napus HOM05D007559 ORTHO05D009642 6.5e-15 85.9 113 37.2
CARHR133080 Cardamine hirsuta HOM05D007559 ORTHO05D009642 6.5e-15 85.9 113 38.9
AT2G38420 Arabidopsis thaliana HOM05D007559 ORTHO05D009642 1.1e-14 85.1 112 39.3
Sp4g20740 Schrenkiella parvula HOM05D007559 ORTHO05D009642 2.5e-14 84.0 108 39.8
Aa31LG5G23900 Aethionema arabicum HOM05D007559 ORTHO05D009642 7.2e-14 82.4 108 38.9
Ca_07722_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.1e-11 75.1 113 40.7
Ca_07728_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.1e-11 75.1 113 40.7
TAR623G1049 Trochodendron aralioides HOM05D020603 ORTHO05D019575 1.6e-10 71.2 35 97.1
TAR623G0356 Trochodendron aralioides HOM05D020603 ORTHO05D038166 4.1e-09 66.6 34 91.2
CDE04G2050 Ceratophyllum demersum HOM05D007559 ORTHO05D009642 2.0e-08 64.3 66 42.4
MBI02_g32066_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 4.5e-08 63.2 56 53.6
HPP92_019906 Vanilla planifolia HOM05D007063 ORTHO05D008822 7.2e-06 55.8 90 36.7
Rhsim04G0048900 Rhododendron simsii HOM05D007559 ORTHO05D009642 9.4e-06 55.5 69 43.5


User provided reference genes

Program Settings