Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 1.1e-253 879.4 424 100.0
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 4.1e-208 728.0 433 80.6
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 3.0e-206 721.8 425 81.4
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 3.9e-206 721.5 417 81.3
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 1.5e-202 709.5 413 80.4
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 4.4e-202 708.0 431 79.1
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 9.8e-202 706.8 420 79.5
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 1.3e-201 706.4 428 77.3
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 1.7e-201 706.1 417 81.3
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 3.7e-201 704.9 430 80.2
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 4.9e-201 704.5 429 78.8
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 1.9e-200 702.6 409 80.4
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 4.1e-200 701.4 428 78.3
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 5.4e-200 701.0 414 80.0
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 1.2e-199 699.9 420 79.8
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 2.7e-199 698.7 427 78.0
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 6.0e-199 697.6 428 77.6
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.0e-198 696.8 429 77.6
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.7e-198 696.0 428 77.1
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 1.7e-198 696.0 429 78.8
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 2.3e-198 695.7 431 77.5
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 5.0e-198 694.5 431 77.7
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 2.5e-197 692.2 431 75.6
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 4.3e-197 691.4 425 77.9
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 9.5e-197 690.3 421 77.9
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 1.6e-196 689.5 430 76.5
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 4.0e-195 684.9 426 77.0
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 1.2e-194 683.3 431 77.0
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.6e-194 682.2 434 75.3
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.6e-194 682.2 434 75.3
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.4e-194 681.8 434 75.1
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 7.5e-194 680.6 417 77.0
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 9.9e-194 680.2 423 78.0
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 4.9e-193 677.9 425 75.8
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.2e-192 675.2 423 77.5
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 4.1e-192 674.9 427 74.7
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 5.4e-192 674.5 433 75.3
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 7.1e-192 674.1 417 78.9
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 6.0e-191 671.0 427 73.8
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 5.1e-190 667.9 428 72.9
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 8.6e-190 667.2 421 74.1
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 2.5e-189 665.6 428 74.5
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 2.8e-188 662.1 417 75.1
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 2.4e-187 659.1 440 72.3
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 4.0e-187 658.3 442 72.6
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 8.9e-187 657.1 428 73.4
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 1.2e-186 656.8 419 73.3
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 3.4e-186 655.2 423 74.0
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 4.4e-186 654.8 415 73.5
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 9.9e-186 653.7 428 72.9
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 2.2e-185 652.5 423 73.5
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 2.9e-185 652.1 423 74.0
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 3.8e-185 651.7 424 74.1
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 8.4e-185 650.6 433 74.6
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 3.2e-184 648.7 433 73.2
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 4.1e-184 648.3 423 72.8
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 5.4e-184 647.9 423 73.3
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 5.4e-184 647.9 422 73.9
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 2.7e-183 645.6 427 73.1
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 2.7e-183 645.6 423 72.8
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 4.6e-183 644.8 408 72.3
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 6.0e-183 644.4 423 72.3
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 6.0e-183 644.4 427 72.8
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.0e-182 643.7 431 72.9
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 2.3e-182 642.5 427 72.8
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.9e-182 641.7 439 70.6
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 3.9e-182 641.7 426 70.9
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 5.1e-182 641.3 429 71.8
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 6.6e-182 641.0 422 73.2
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 6.6e-182 641.0 429 71.8
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 8.7e-182 640.6 452 69.9
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 8.7e-182 640.6 424 71.0
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.5e-181 639.0 428 71.5
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 3.3e-181 638.6 409 74.6
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 5.6e-181 637.9 413 72.9
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 2.1e-180 636.0 428 71.5
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 1.8e-179 632.9 414 72.7
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 1.8e-179 632.9 414 72.7
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 2.4e-179 632.5 424 71.5
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 6.9e-179 630.9 426 70.7
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.6e-178 629.0 418 72.0
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.3e-177 626.7 418 71.8
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 8.4e-177 624.0 426 70.9
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 8.4e-177 624.0 426 70.9
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.6e-175 619.8 410 72.7
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 4.6e-175 618.2 433 68.4
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 7.8e-175 617.5 409 72.1
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 2.3e-174 615.9 434 68.4
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 1.5e-173 613.2 425 71.5
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.3e-173 612.1 419 70.6
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 5.6e-173 611.3 421 69.1
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 1.3e-172 610.1 435 68.5
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 1.3e-172 610.1 423 69.0
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.1e-171 607.1 425 67.8
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.4e-171 605.9 417 69.1
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 4.9e-169 598.2 422 65.6
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 4.9e-169 598.2 428 68.5
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 7.1e-168 594.3 422 65.4
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.1e-167 592.8 436 67.9
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.3e-166 590.1 427 67.9
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.3e-166 589.3 428 65.9
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 8.7e-166 587.4 397 70.5
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.8e-164 582.4 433 65.6
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-163 580.5 414 68.1
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 9.0e-163 577.4 423 67.4
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 4.9e-161 571.6 429 62.9
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 3.9e-158 562.0 419 64.0
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 1.8e-155 553.1 352 74.7
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 1.2e-154 550.4 428 59.6
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 2.6e-154 549.3 418 66.5
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.2e-153 546.2 434 62.0
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 2.2e-153 546.2 428 58.4
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 1.4e-152 543.5 408 63.2
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 1.9e-152 543.1 414 63.0
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.7e-151 539.3 452 59.1
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 8.7e-150 534.3 424 60.4
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.6e-143 512.3 392 60.7
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.3e-140 503.8 414 58.2
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 5.1e-134 481.9 404 60.1
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 1.3e-129 467.2 308 71.4
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 3.3e-125 452.6 432 53.0
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 3.1e-123 446.0 294 69.7
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.0e-121 441.0 426 56.8
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.7e-116 423.7 426 54.9
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 1.1e-115 421.0 409 51.6
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.8e-110 403.7 413 46.7
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.8e-110 403.7 413 46.5
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 9.8e-109 397.9 273 68.5
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.8e-108 396.4 345 54.5
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 3.1e-94 349.7 226 73.9
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 1.2e-93 347.8 239 69.9
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 4.4e-93 345.9 423 42.1
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 6.6e-89 332.0 290 54.5
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 3.3e-88 329.7 261 65.9
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 1.9e-67 260.8 154 78.6
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 6.6e-57 225.7 161 65.2
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.3e-54 216.1 309 40.5
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 6.9e-54 215.7 137 72.3
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 4.6e-50 203.0 130 71.5
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 7.9e-50 202.2 113 79.6
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 9.6e-48 195.3 125 78.4
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 6.9e-46 189.1 145 62.8
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.3e-39 168.3 220 46.4
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 1.6e-39 167.9 159 59.1
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 2.0e-37 161.0 158 57.0
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 3.4e-37 160.2 406 28.3
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 1.3e-23 115.2 92 67.4
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-22 112.1 78 65.4
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-22 112.1 79 67.1
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 6.9e-22 109.4 100 59.0
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.3e-20 105.1 76 65.8
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 3.2e-19 100.5 82 59.8
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 7.2e-19 99.4 66 69.7
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 9.4e-19 99.0 87 54.0
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 6.1e-18 96.3 62 74.2
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.3e-17 94.4 168 33.9
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-16 92.0 68 67.6
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 4.1e-14 83.6 57 73.7
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 9.1e-14 82.4 60 66.7
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 9.4e-11 72.4 58 67.2
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 3.9e-09 67.0 100 36.0
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 5.2e-09 66.6 55 61.8
Cpa.g.c45316 Carica papaya HOM05D004203 ORTHO05D004830 1.5e-08 65.1 42 69.0
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 2.8e-07 60.8 42 64.3
A05p19690 Brassica napus HOM05D004203 ORTHO05D004830 2.8e-07 60.8 51 62.7
SEGI_15796 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 1.1e-06 58.9 50 56.0
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.8e-06 58.2 71 35.2
SEGI_22616 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.1e-06 55.8 83 33.7


User provided reference genes

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