Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 6.7e-179 630.6 315 100.0
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 4.1e-144 515.0 315 81.0
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.3e-126 456.8 299 76.9
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 5.4e-112 408.3 339 66.4
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 3.5e-103 379.0 321 63.2
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 3.5e-103 379.0 325 64.0
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 5.9e-103 378.3 313 62.3
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.5e-101 372.9 320 62.5
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 4.4e-98 362.1 324 60.5
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 4.4e-98 362.1 312 61.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 5.8e-98 361.7 319 61.1
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 7.5e-98 361.3 326 60.1
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 5.4e-96 355.1 317 59.6
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 4.6e-95 352.1 324 59.3
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 3.0e-94 349.4 330 59.4
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 7.3e-93 344.7 316 58.5
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.2e-89 333.2 313 58.1
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.6e-87 327.0 324 56.2
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.0e-86 324.3 326 56.1
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.5e-85 320.5 320 55.3
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 7.3e-85 318.2 313 56.9
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.2e-84 317.4 313 56.2
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.6e-84 317.0 315 56.2
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 2.8e-84 316.2 316 53.8
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 3.6e-84 315.8 318 53.8
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 4.7e-84 315.5 311 56.3
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 3.1e-83 312.8 316 55.7
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.0e-83 312.4 313 56.2
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 8.9e-83 311.2 317 54.3
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.2e-82 310.8 313 55.9
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 1.5e-82 310.5 313 55.0
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 9.9e-82 307.8 315 55.9
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.2e-81 306.6 319 53.6
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 4.9e-81 305.4 312 55.4
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 6.4e-81 305.1 312 55.4
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 4.1e-80 302.4 301 53.8
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 7.1e-80 301.6 336 52.7
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 9.2e-80 301.2 302 56.6
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 2.7e-79 299.7 319 52.7
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 3.5e-79 299.3 319 53.9
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.3e-78 297.4 323 54.8
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.3e-78 297.4 312 55.1
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 1.3e-78 297.4 319 52.0
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 3.0e-78 296.2 330 51.2
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.1e-77 294.3 320 51.2
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.9e-77 293.5 321 50.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 2.5e-77 293.1 311 52.4
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 5.6e-77 292.0 305 52.5
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 7.3e-77 291.6 317 51.7
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 9.6e-77 291.2 339 51.3
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.6e-76 290.4 311 50.8
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.6e-76 290.4 316 51.3
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 3.6e-76 289.3 322 52.5
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 3.6e-76 289.3 321 50.2
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 4.7e-76 288.9 326 51.8
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 4.7e-76 288.9 316 49.4
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 1.1e-75 287.7 313 51.8
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 1.1e-75 287.7 316 49.7
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 1.8e-75 287.0 318 52.8
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.4e-75 286.6 320 53.8
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 4.0e-75 285.8 313 52.4
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.2e-74 284.3 311 51.8
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.5e-74 283.9 309 55.0
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 3.4e-74 282.7 318 50.9
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 1.3e-73 280.8 323 52.0
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 3.8e-73 279.3 319 52.4
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 8.4e-73 278.1 318 50.0
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 8.4e-73 278.1 316 50.9
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 4.2e-72 275.8 308 53.2
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.4e-72 275.4 304 50.0
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.6e-71 273.9 313 48.6
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.5e-71 272.7 313 48.9
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 6.0e-71 271.9 305 49.2
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 7.8e-71 271.6 312 50.6
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 1.7e-70 270.4 317 49.8
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 6.6e-70 268.5 318 49.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 1.5e-69 267.3 319 49.5
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 1.5e-69 267.3 304 50.0
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 1.9e-69 266.9 317 49.2
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 3.3e-69 266.2 320 48.1
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 7.3e-69 265.0 315 50.5
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 9.6e-69 264.6 321 50.5
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 1.6e-68 263.8 301 51.8
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 3.6e-68 262.7 313 48.2
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.6e-68 262.7 313 48.2
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.1e-67 261.2 313 48.6
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.1e-67 261.2 319 46.4
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 3.1e-67 259.6 335 44.8
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 2.6e-66 256.5 319 45.8
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 3.4e-66 256.1 320 46.9
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 2.2e-65 253.4 325 47.1
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 2.4e-64 250.0 318 48.4
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 1.1e-61 241.1 328 46.0
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 2.1e-60 236.9 198 63.6
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 4.5e-58 229.2 316 43.7
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.7e-57 227.3 275 48.0
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 1.1e-56 224.6 304 46.4
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 9.3e-56 221.5 304 44.4
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 6.0e-55 218.8 310 43.5
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 4.3e-53 212.6 392 37.0
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 2.1e-52 210.3 344 40.1
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 5.5e-48 195.7 186 58.1
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 4.6e-47 192.6 181 56.4
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 4.3e-45 186.0 241 44.8
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.8e-41 172.9 300 41.0
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 3.3e-37 159.8 312 35.9
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 4.3e-37 159.5 392 29.8
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 7.4e-37 158.7 308 37.0
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.1e-35 154.8 181 48.6
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.4e-30 137.9 134 54.5
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 2.3e-30 137.1 207 43.0
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.4e-27 127.1 306 33.7
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 3.4e-26 123.2 351 29.9
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.8e-20 103.6 263 31.9
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 3.5e-18 96.7 89 56.2
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 3.8e-17 93.2 130 48.5
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 9.4e-16 88.6 66 66.7
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 4.8e-12 76.3 97 41.2
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 4.1e-11 73.2 76 50.0
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 1.6e-07 61.2 69 46.4
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 2.1e-07 60.8 78 41.0
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 2.1e-07 60.8 78 43.6
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 6.8e-06 55.8 82 45.1
VMungo0647G0753 Vigna mungo HOM05D006207 ORTHO05D007868 8.8e-06 55.5 118 38.1


User provided reference genes

Program Settings