Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 3.1e-153 545.0 266 100.0
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 3.7e-106 388.7 264 70.8
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 7.3e-102 374.4 267 69.3
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 4.0e-100 368.6 269 69.1
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 6.8e-100 367.9 273 68.5
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 2.2e-98 362.8 258 69.4
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 4.9e-98 361.7 266 67.3
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 6.4e-98 361.3 266 67.7
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 1.4e-97 360.1 266 68.0
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.8e-97 359.8 266 67.7
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 1.2e-96 357.1 268 67.9
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 3.0e-95 352.4 267 67.0
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 3.0e-95 352.4 267 65.9
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 3.9e-95 352.1 267 66.3
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 8.6e-95 350.9 266 65.8
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 3.3e-94 349.0 267 65.9
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 2.8e-93 345.9 267 63.3
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 4.7e-93 345.1 268 65.3
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 1.1e-92 344.0 270 65.2
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.8e-92 343.2 263 64.6
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 2.3e-92 342.8 263 65.4
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 3.1e-92 342.4 267 62.9
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 4.0e-92 342.0 268 64.6
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 4.0e-92 342.0 268 64.6
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 3.4e-91 339.0 263 63.5
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 5.8e-91 338.2 264 64.0
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 1.7e-90 336.7 265 63.4
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 4.9e-90 335.1 267 62.9
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 2.4e-89 332.8 267 62.2
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 5.4e-89 331.6 266 63.5
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 2.7e-88 329.3 270 63.0
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.0e-87 327.4 268 63.4
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 3.9e-87 325.5 272 60.3
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 1.9e-86 323.2 271 61.3
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 7.3e-86 321.2 263 62.0
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 2.1e-85 319.7 266 60.9
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 6.2e-85 318.2 226 71.2
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 1.1e-84 317.4 285 59.3
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.3e-84 316.2 263 61.2
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 5.2e-84 315.1 266 59.4
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 6.8e-84 314.7 266 59.0
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 1.1e-81 307.4 266 60.2
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 2.4e-81 306.2 262 59.5
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 4.1e-81 305.4 258 60.1
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.6e-80 303.5 278 58.6
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 2.7e-80 302.8 264 58.7
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 4.6e-80 302.0 264 58.7
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 4.6e-80 302.0 262 57.6
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 6.0e-80 301.6 263 58.9
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.0e-79 300.8 302 54.0
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 1.0e-79 300.8 267 59.6
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 3.9e-79 298.9 266 58.6
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 4.3e-78 295.4 240 62.5
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 7.3e-78 294.7 264 57.2
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 2.1e-77 293.1 194 71.1
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 2.8e-77 292.7 261 59.4
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 4.7e-77 292.0 261 62.1
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 6.2e-77 291.6 215 65.6
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 6.2e-77 291.6 266 56.8
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.4e-76 290.4 261 59.8
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 1.8e-76 290.0 266 59.0
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 2.4e-76 289.7 261 61.3
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 3.1e-76 289.3 265 57.4
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 6.8e-76 288.1 261 60.9
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 1.2e-75 287.3 275 55.6
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 1.5e-75 287.0 257 57.6
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 3.8e-74 282.3 257 58.4
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 3.8e-74 282.3 231 61.9
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 8.4e-74 281.2 261 58.2
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 4.1e-73 278.9 191 67.0
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 5.4e-73 278.5 261 58.2
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 3.5e-72 275.8 270 56.7
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.7e-71 273.5 255 58.4
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 3.0e-71 272.7 284 54.2
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 1.6e-69 266.9 198 69.7
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 4.7e-69 265.4 278 54.0
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 2.4e-68 263.1 212 64.2
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 2.4e-68 263.1 210 62.9
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 9.0e-68 261.2 191 63.9
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 3.4e-67 259.2 264 53.0
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 2.9e-66 256.1 265 52.5
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 2.9e-66 256.1 260 53.5
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 2.1e-61 240.0 198 65.2
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 3.6e-61 239.2 265 46.4
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 1.1e-60 237.7 192 66.1
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.8e-60 236.9 147 74.8
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 2.4e-60 236.5 262 46.9
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 6.9e-60 235.0 266 49.6
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.4e-57 227.3 203 60.1
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.4e-57 227.3 190 63.7
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 3.2e-57 226.1 259 51.4
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 1.3e-55 220.7 263 46.4
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 5.1e-55 218.8 279 44.1
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.3e-53 214.2 208 58.7
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 1.6e-53 213.8 190 58.4
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 1.6e-53 213.8 282 46.5
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 4.0e-52 209.1 178 61.8
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 2.1e-48 196.8 290 41.7
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.8e-43 178.7 161 61.5
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 3.8e-42 176.0 266 42.1
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 9.3e-41 171.4 160 56.2
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 1.0e-39 167.9 140 62.1
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 5.3e-36 155.6 136 61.0
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 2.6e-35 153.3 160 52.5
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 7.6e-35 151.8 160 57.5
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 5.7e-30 135.6 252 36.1
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-28 131.0 107 55.1
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 6.9e-28 128.6 172 46.5
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 7.9e-24 115.2 70 72.9
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 5.7e-22 109.0 71 70.4
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 1.7e-21 107.5 173 35.8
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 8.0e-16 88.6 205 35.1
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 5.2e-15 85.9 137 36.5
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 3.3e-14 83.2 175 34.3


User provided reference genes

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