Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 2.0e-58 228.8 109 100.0
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 9.1e-43 176.8 108 75.9
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.9e-41 171.8 108 72.2
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 8.5e-41 170.2 109 73.4
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 8.5e-41 170.2 104 76.9
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 1.5e-40 169.5 113 74.3
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.5e-40 169.5 104 76.0
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 3.2e-40 168.3 108 71.3
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 5.5e-40 167.5 109 73.4
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 2.1e-39 165.6 108 72.2
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 2.7e-39 165.2 109 73.4
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.7e-39 164.5 108 71.3
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 8.0e-39 163.7 109 68.8
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 8.0e-39 163.7 108 72.2
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 3.0e-38 161.8 108 69.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 6.7e-38 160.6 109 71.6
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.5e-37 159.5 103 72.8
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.6e-37 158.7 110 69.1
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 3.3e-37 158.3 108 70.4
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 4.4e-37 157.9 113 67.3
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.7e-37 157.5 107 70.1
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 9.7e-37 156.8 109 69.7
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 2.2e-36 155.6 104 70.2
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 3.7e-36 154.8 109 70.6
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 6.3e-36 154.1 108 67.6
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.8e-35 152.5 108 65.7
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.8e-35 152.5 104 69.2
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.1e-35 151.4 107 69.2
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 7.0e-35 150.6 107 66.4
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 2.0e-34 149.1 107 64.5
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 2.7e-34 148.7 111 67.6
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.7e-34 148.7 93 73.1
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.9e-34 147.5 104 68.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.7e-34 147.1 112 66.1
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 7.7e-34 147.1 108 66.7
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.0e-33 146.7 112 66.1
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.0e-33 146.7 112 66.1
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 1.0e-33 146.7 108 63.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 1.0e-33 146.7 108 63.9
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 1.3e-33 146.4 104 68.3
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-33 146.4 104 68.3
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-33 146.4 104 68.3
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.3e-33 146.4 104 68.3
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 2.9e-33 145.2 107 68.2
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.0e-33 144.4 104 67.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 5.0e-33 144.4 94 72.3
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.5e-32 142.9 108 63.9
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.9e-32 142.5 104 68.3
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 2.5e-32 142.1 110 62.7
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 2.5e-32 142.1 90 73.3
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.5e-32 142.1 108 65.7
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 4.2e-32 141.4 113 62.8
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 5.5e-32 141.0 93 74.2
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 7.2e-32 140.6 113 62.8
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 9.4e-32 140.2 93 72.0
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.2e-31 139.8 108 63.9
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.2e-31 139.8 108 63.9
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 2.1e-31 139.0 109 64.2
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.1e-31 139.0 104 63.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.1e-31 139.0 89 74.2
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 2.7e-31 138.7 110 64.5
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 4.7e-31 137.9 105 62.9
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 4.7e-31 137.9 104 65.4
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.0e-30 136.7 91 70.3
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 1.4e-30 136.3 95 68.4
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.8e-30 136.0 91 74.7
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.8e-30 136.0 91 74.7
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 2.3e-30 135.6 107 62.6
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 3.0e-30 135.2 94 68.1
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 3.0e-30 135.2 105 62.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 5.2e-30 134.4 95 72.6
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 6.8e-30 134.0 113 58.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 6.8e-30 134.0 104 61.5
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 8.8e-30 133.7 108 60.2
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.5e-29 132.9 106 60.4
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 5.7e-29 131.0 90 68.9
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 5.7e-29 131.0 108 64.8
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 9.8e-29 130.2 106 61.3
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.2e-28 129.0 104 64.4
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.1e-27 126.7 101 61.4
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.8e-27 125.9 114 54.4
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.4e-27 125.6 92 62.0
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 5.4e-27 124.4 105 59.0
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 7.0e-27 124.0 109 55.0
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 9.1e-27 123.6 108 55.6
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 9.1e-27 123.6 95 64.2
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 2.0e-26 122.5 108 54.6
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.0e-26 122.5 106 54.7
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 2.7e-26 122.1 108 54.6
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.7e-26 122.1 88 64.8
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 2.7e-26 122.1 105 62.9
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.5e-26 121.7 92 63.0
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 4.5e-26 121.3 108 53.7
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 7.7e-26 120.6 102 62.7
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.7e-25 119.4 93 62.4
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 2.3e-25 119.0 93 63.4
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.8e-25 118.2 92 62.0
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 6.5e-25 117.5 86 66.3
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.1e-24 116.7 93 62.4
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.5e-24 116.3 111 52.3
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.5e-24 115.5 108 52.8
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.3e-24 115.2 102 53.9
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 2.1e-23 112.5 79 70.9
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.0e-22 110.2 106 50.9
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.0e-22 108.6 102 52.9
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 4.0e-22 108.2 93 55.9
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 4.0e-22 108.2 102 52.9
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.5e-21 106.3 93 57.0
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 5.7e-21 104.4 93 55.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 7.5e-21 104.0 72 65.3
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 1.3e-20 103.2 93 55.9
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 1.3e-20 103.2 93 55.9
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 1.3e-20 103.2 93 55.9
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 2.8e-20 102.1 84 59.5
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.8e-20 102.1 94 50.0
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 3.7e-20 101.7 91 51.6
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.7e-20 101.7 68 66.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.3e-20 100.9 94 50.0
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.8e-19 99.4 92 50.0
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 4.1e-19 98.2 92 50.0
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 9.2e-19 97.1 66 66.7
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.0e-17 93.6 68 61.8
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 8.6e-17 90.5 89 50.6
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 7.3e-16 87.4 73 54.8
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 7.3e-16 87.4 57 66.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 4.7e-15 84.7 71 56.3
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 4.7e-15 84.7 71 56.3
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-14 82.8 73 53.4
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-14 82.8 73 53.4
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 1.8e-14 82.8 73 53.4
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 1.8e-14 82.8 73 53.4
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 7.3e-08 60.8 60 38.3


User provided reference genes

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