Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 4.1e-101 371.3 178 100.0
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 9.1e-24 114.4 216 39.8
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 7.7e-23 111.3 158 48.7
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 1.4e-19 100.5 156 46.2
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 4.4e-18 95.5 156 42.9
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 5.7e-18 95.1 157 42.7
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 5.7e-18 95.1 159 42.1
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 9.7e-18 94.4 157 43.3
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 9.7e-18 94.4 162 43.2
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 3.7e-17 92.4 157 42.0
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 1.4e-16 90.5 155 42.6
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 2.4e-16 89.7 155 42.6
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.4e-16 89.7 159 42.1
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 2.4e-16 89.7 152 42.8
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 3.1e-16 89.4 148 43.2
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 4.1e-16 89.0 157 38.9
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 4.1e-16 89.0 157 40.8
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 4.1e-16 89.0 154 41.6
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 5.3e-16 88.6 160 39.4
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 5.3e-16 88.6 169 39.1
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 5.3e-16 88.6 148 41.2
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 6.9e-16 88.2 160 39.4
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 6.9e-16 88.2 152 40.8
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 6.9e-16 88.2 149 40.3
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 9.1e-16 87.8 139 43.2
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 1.5e-15 87.0 157 39.5
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 2.0e-15 86.7 158 39.2
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 2.6e-15 86.3 156 41.0
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 3.4e-15 85.9 157 40.8
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 3.4e-15 85.9 160 40.0
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 3.4e-15 85.9 157 38.9
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 3.4e-15 85.9 157 40.8
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 4.5e-15 85.5 159 39.0
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 4.5e-15 85.5 159 39.0
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 4.5e-15 85.5 157 40.1
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 5.9e-15 85.1 155 39.4
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 7.7e-15 84.7 155 39.4
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 1.0e-14 84.3 159 39.0
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.0e-14 84.3 149 40.3
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 1.0e-14 84.3 160 39.4
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 1.3e-14 84.0 156 39.1
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.2e-14 83.2 174 37.9
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 2.2e-14 83.2 158 39.2
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 2.9e-14 82.8 158 37.3
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.9e-14 82.8 155 38.7
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 2.9e-14 82.8 157 40.1
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 2.9e-14 82.8 153 39.9
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 3.8e-14 82.4 157 40.1
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 3.8e-14 82.4 159 38.4
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 1.1e-13 80.9 159 37.7
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.1e-13 80.9 146 39.7
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 1.1e-13 80.9 153 38.6
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 1.4e-13 80.5 152 39.5
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.4e-13 80.5 152 38.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 2.5e-13 79.7 151 37.7
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 2.5e-13 79.7 157 37.6
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.5e-13 79.7 156 37.8
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 2.5e-13 79.7 151 38.4
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 4.2e-13 79.0 150 38.0
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 5.5e-13 78.6 144 41.0
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 7.2e-13 78.2 155 38.1
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 7.2e-13 78.2 151 38.4
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.4e-13 77.8 156 36.5
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.4e-13 77.8 156 36.5
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 9.4e-13 77.8 156 36.5
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 9.4e-13 77.8 150 37.3
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 9.4e-13 77.8 157 38.2
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.2e-12 77.4 141 38.3
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 2.1e-12 76.6 150 37.3
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.1e-12 76.6 156 36.5
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.1e-12 76.6 150 37.3
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 2.1e-12 76.6 148 38.5
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 2.7e-12 76.3 156 37.2
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 4.7e-12 75.5 159 36.5
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 4.7e-12 75.5 150 38.0
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.0e-11 74.3 158 36.1
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 1.4e-11 73.9 140 38.6
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 1.8e-11 73.6 157 36.3
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.8e-11 73.6 178 36.0
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 1.8e-11 73.6 155 37.4
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.3e-11 73.2 141 36.9
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 2.3e-11 73.2 159 35.2
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 3.9e-11 72.4 158 35.4
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 6.7e-11 71.6 157 36.9
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 6.7e-11 71.6 156 35.9
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 6.7e-11 71.6 141 35.5
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 2.6e-10 69.7 161 34.2
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 3.3e-10 69.3 131 37.4
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 3.3e-10 69.3 168 36.3
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 4.4e-10 68.9 141 34.8
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 7.4e-10 68.2 150 36.7
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 9.7e-10 67.8 161 36.6
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 9.7e-10 67.8 161 36.6
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 9.7e-10 67.8 150 36.0
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.7e-09 67.0 146 37.0
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 2.2e-09 66.6 152 36.2
GSVIVG01016032001 Vitis vinifera HOM05D053242 ORTHO05D037809 2.2e-09 66.6 52 53.8
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 3.7e-09 65.9 150 36.0
GSVIVG01016045001 Vitis vinifera HOM05D053242 ORTHO05D037809 3.7e-09 65.9 52 53.8
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 4.8e-09 65.5 153 34.6
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 8.2e-09 64.7 138 37.7
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 8.2e-09 64.7 150 35.3
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 8.2e-09 64.7 150 35.3
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 8.2e-09 64.7 150 35.3
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.4e-08 63.9 151 35.1
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.4e-08 63.9 151 35.1
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 1.4e-08 63.9 151 35.1
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 2.4e-08 63.2 151 35.1
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 3.1e-08 62.8 82 53.7
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 7.0e-08 61.6 152 35.5
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 7.0e-08 61.6 152 35.5
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 7.0e-08 61.6 152 35.5
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 7.0e-08 61.6 152 35.5
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 7.0e-08 61.6 162 30.9
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 1.6e-07 60.5 153 30.7
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.6e-07 59.7 42 78.6
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 7.7e-07 58.2 152 34.2
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 1.3e-06 57.4 28 85.7
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 3.8e-06 55.8 97 39.2
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 6.5e-06 55.1 28 85.7


User provided reference genes

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