Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.0e-91 340.1 179 100.0
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 5.3e-40 168.3 133 67.7
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 5.9e-39 164.9 133 66.2
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 3.8e-38 162.2 138 63.8
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.9e-37 159.8 133 63.9
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 7.2e-37 157.9 127 64.6
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.0e-35 154.1 140 61.4
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 1.0e-35 154.1 131 62.6
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 1.8e-35 153.3 133 63.9
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 3.9e-35 152.1 129 62.8
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 8.8e-35 151.0 129 62.8
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.5e-34 150.2 134 61.9
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 2.2e-33 146.4 135 62.2
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.4e-32 143.7 130 59.2
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 2.4e-32 142.9 132 59.1
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 2.4e-32 142.9 132 57.6
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 3.1e-32 142.5 125 60.8
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 5.3e-32 141.7 128 57.8
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 9.1e-32 141.0 133 59.4
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 1.5e-31 140.2 134 56.0
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.6e-31 139.4 132 58.3
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 2.6e-31 139.4 134 55.2
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.0e-30 137.5 143 55.9
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 1.3e-30 137.1 125 57.6
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.3e-30 137.1 125 57.6
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.3e-30 137.1 125 57.6
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.3e-30 137.1 129 61.2
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 1.3e-30 137.1 129 61.2
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 3.8e-30 135.6 127 59.1
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 5.0e-30 135.2 127 54.3
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 5.0e-30 135.2 128 60.9
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 6.5e-30 134.8 125 56.8
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 6.5e-30 134.8 143 55.2
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 8.5e-30 134.4 125 57.6
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 1.1e-29 134.0 139 52.5
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 1.5e-29 133.7 134 56.0
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 2.5e-29 132.9 144 52.8
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 2.5e-29 132.9 130 56.2
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 2.5e-29 132.9 142 52.1
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 4.2e-29 132.1 130 54.6
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 7.2e-29 131.3 136 57.4
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 7.2e-29 131.3 119 57.1
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 9.4e-29 131.0 123 60.2
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 1.2e-28 130.6 121 55.4
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 1.6e-28 130.2 142 52.1
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.1e-28 129.8 139 53.2
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 4.7e-28 128.6 133 58.6
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 8.0e-28 127.9 128 55.5
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.0e-27 127.5 127 56.7
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 1.0e-27 127.5 127 53.5
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 1.4e-27 127.1 130 53.8
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 1.8e-27 126.7 138 52.2
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 1.8e-27 126.7 132 56.1
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 3.0e-27 125.9 127 55.9
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 5.2e-27 125.2 144 52.8
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.1e-26 124.0 123 55.3
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 2.0e-26 123.2 119 57.1
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 2.6e-26 122.9 124 56.5
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 2.6e-26 122.9 131 51.1
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 2.6e-26 122.9 130 55.4
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 3.3e-26 122.5 139 48.9
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 4.4e-26 122.1 133 53.4
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 4.4e-26 122.1 134 51.5
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 7.4e-26 121.3 114 55.3
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 7.4e-26 121.3 121 52.9
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 9.7e-26 120.9 122 53.3
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 1.3e-25 120.6 134 47.8
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.3e-25 120.6 120 54.2
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.7e-25 120.2 128 50.8
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 2.2e-25 119.8 131 48.9
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 2.2e-25 119.8 113 54.9
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 2.8e-25 119.4 108 53.7
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 3.7e-25 119.0 129 51.2
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 3.7e-25 119.0 140 48.6
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 3.7e-25 119.0 128 50.0
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 6.3e-25 118.2 125 51.2
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 6.3e-25 118.2 132 50.0
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 1.8e-24 116.7 127 49.6
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 1.8e-24 116.7 136 50.7
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 2.4e-24 116.3 134 48.5
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 4.1e-24 115.5 124 47.6
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 7.0e-24 114.8 130 50.0
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 9.1e-24 114.4 124 51.6
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 9.1e-24 114.4 132 48.5
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 1.6e-23 113.6 117 52.1
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 2.0e-23 113.2 134 47.8
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 2.6e-23 112.8 146 47.3
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 5.9e-23 111.7 131 51.1
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 2.2e-22 109.8 85 78.8
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 5.0e-22 108.6 123 52.0
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 6.5e-22 108.2 135 47.4
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 6.5e-22 108.2 98 61.2
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 8.5e-22 107.8 145 47.6
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 8.5e-22 107.8 129 47.3
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.1e-21 107.5 133 51.1
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 1.5e-21 107.1 131 48.9
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 1.9e-21 106.7 135 44.4
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 1.6e-20 103.6 134 48.5
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 2.1e-20 103.2 123 48.8
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 3.6e-20 102.4 100 55.0
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 4.7e-20 102.1 132 47.0
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 4.7e-20 102.1 132 47.0
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 6.1e-20 101.7 133 49.6
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 6.1e-20 101.7 129 42.6
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 1.0e-19 100.9 86 59.3
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.0e-19 100.9 129 45.7
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 1.0e-19 100.9 141 46.1
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.0e-19 100.9 122 48.4
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 2.3e-19 99.8 123 47.2
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 5.2e-19 98.6 130 41.5
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 1.5e-18 97.1 133 45.9
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.5e-18 97.1 123 45.5
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 3.4e-18 95.9 128 43.8
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 4.4e-18 95.5 133 43.6
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 4.4e-18 95.5 119 42.0
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 4.4e-18 95.5 124 47.6
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 7.5e-18 94.7 133 44.4
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 1.7e-17 93.6 126 42.9
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 1.7e-17 93.6 133 45.1
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.7e-17 93.6 117 41.9
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 5.4e-16 88.6 105 47.6
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 9.1e-16 87.8 155 40.6
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.6e-15 87.0 103 50.5
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 5.9e-15 85.1 118 42.4
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 6.5e-14 81.6 118 41.5
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 8.5e-14 81.3 126 39.7
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 1.1e-13 80.9 116 44.0
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.5e-13 80.5 119 40.3
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 1.9e-13 80.1 116 44.0
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.2e-13 79.3 128 39.8
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 7.2e-13 78.2 119 42.0
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 9.4e-13 77.8 116 44.0
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 9.4e-13 77.8 124 37.9
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 3.6e-12 75.9 127 37.8
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 3.6e-12 75.9 68 54.4
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 6.1e-12 75.1 74 58.1
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 8.0e-12 74.7 133 40.6
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 8.0e-12 74.7 133 40.6
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 3.0e-11 72.8 133 39.8
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 2.0e-10 70.1 117 36.8
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 3.1e-08 62.8 68 51.5
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 9.1e-08 61.2 124 36.3


User provided reference genes

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