Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.3e-96 356.3 173 100.0
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 3.1e-53 212.2 167 64.7
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 4.5e-52 208.4 174 60.3
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 5.0e-51 204.9 168 60.1
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 6.5e-51 204.5 171 61.4
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 4.1e-45 185.3 171 56.7
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 9.0e-45 184.1 191 52.9
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 1.5e-44 183.3 180 55.6
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 2.0e-44 183.0 165 55.8
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 3.4e-44 182.2 160 58.1
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 2.2e-43 179.5 190 53.7
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 8.5e-43 177.6 173 54.9
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 1.1e-42 177.2 170 53.5
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 1.9e-42 176.4 171 53.2
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.8e-40 169.9 172 52.9
TAR623G0840 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.8e-40 169.9 81 98.8
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 2.0e-39 166.4 157 52.9
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.0e-39 166.4 166 54.2
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 2.0e-39 166.4 166 54.2
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 3.3e-39 165.6 176 51.7
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 3.3e-39 165.6 203 49.3
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 5.7e-39 164.9 160 51.9
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 3.7e-38 162.2 152 57.2
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 1.1e-37 160.6 170 49.4
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 3.1e-37 159.1 176 51.7
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 3.1e-37 159.1 157 56.1
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 3.1e-37 159.1 172 52.9
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.0e-36 156.4 146 56.8
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 2.0e-36 156.4 166 51.2
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 3.4e-36 155.6 146 56.8
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 7.7e-36 154.5 179 48.6
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 1.0e-35 154.1 152 55.3
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 1.3e-35 153.7 173 52.6
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 2.9e-35 152.5 184 46.2
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 3.8e-35 152.1 170 50.6
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 8.5e-35 151.0 183 45.9
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 1.9e-34 149.8 182 47.8
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 1.9e-34 149.8 177 46.9
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 1.9e-34 149.8 195 49.7
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 1.9e-34 149.8 176 51.7
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 2.5e-34 149.4 170 48.2
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 3.2e-34 149.1 178 48.3
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 1.2e-33 147.1 159 54.7
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 1.6e-33 146.7 181 45.3
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 2.7e-33 146.0 190 46.3
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 4.7e-33 145.2 182 46.2
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 4.7e-33 145.2 148 50.7
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 4.7e-33 145.2 173 50.3
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 6.1e-33 144.8 174 48.9
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.0e-32 144.1 148 50.0
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 1.8e-32 143.3 171 53.2
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 4.4e-31 138.7 173 45.1
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 7.4e-31 137.9 179 46.9
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 1.3e-30 137.1 149 51.7
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 6.3e-30 134.8 174 46.0
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 8.2e-30 134.4 190 42.1
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 8.2e-30 134.4 173 50.3
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 3.1e-29 132.5 166 47.6
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 3.1e-29 132.5 183 43.2
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 3.1e-29 132.5 128 55.5
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 1.5e-28 130.2 173 45.7
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 2.6e-28 129.4 174 45.4
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 2.6e-28 129.4 167 46.7
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 1.2e-25 120.6 158 49.4
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 2.1e-25 119.8 145 46.9
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 4.7e-25 118.6 154 45.5
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 6.1e-25 118.2 143 46.2
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 3.3e-23 112.5 173 42.8
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 5.7e-23 111.7 142 43.7
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 1.7e-22 110.2 156 42.3
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 3.7e-22 109.0 123 49.6
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 3.5e-20 102.4 153 43.1
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.7e-19 100.1 110 46.4
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 2.9e-19 99.4 127 44.9
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 5.0e-19 98.6 155 39.4
Sc10g0002880 Simmondsia chinensis HOM05D007902 ORTHO05D009839 5.5e-18 95.1 79 55.7
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 1.6e-17 93.6 85 54.1
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 3.6e-17 92.4 136 42.6
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 4.7e-17 92.0 72 59.7
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 1.8e-16 90.1 84 52.4
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 9.8e-15 84.3 85 47.1
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.5e-12 75.5 60 65.0
Nn5g26912 Nelumbo nucifera HOM05D007902 ORTHO05D009839 1.0e-11 74.3 106 38.7
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 3.8e-11 72.4 73 53.4
Cc11_g04510 Coffea canephora HOM05D000727 ORTHO05D000541 6.5e-11 71.6 164 31.7
MBI19_g06976_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 5.5e-10 68.6 59 55.9
MBI18_g32335_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 7.2e-10 68.2 64 51.6
PSO206G0034 Papaver somniferum HOM05D000727 ORTHO05D000541 2.7e-09 66.2 159 30.8
PSO339G3557 Papaver somniferum HOM05D000727 ORTHO05D000541 8.0e-09 64.7 159 30.2
AUR62012352 Chenopodium quinoa HOM05D038520 ORTHO05D009839 5.2e-08 62.0 90 40.0
BcaNung01853 Brassica carinata HOM05D003223 ORTHO05D014735 6.8e-08 61.6 49 63.3
CsaV3_5G021890 Cucumis sativus L. HOM05D000727 ORTHO05D000541 8.8e-08 61.2 169 27.8
HanXRQChr17g0540661 Helianthus annuus HOM05D000727 ORTHO05D000541 8.8e-08 61.2 205 28.8
Os08g0101100 Oryza sativa ssp. japonica HOM05D000727 ORTHO05D000541 1.5e-07 60.5 153 28.1
SGA_v2.0_scaffold127G33972 Striga asiatica HOM05D000727 ORTHO05D000541 1.5e-07 60.5 167 28.7
RhsimUnG0102400 Rhododendron simsii HOM05D000727 ORTHO05D000541 2.6e-07 59.7 185 28.1
Aa31LG11G2850 Aethionema arabicum HOM05D000727 ORTHO05D000541 5.7e-07 58.5 184 25.5
TPR.G4017 Trifolium pratense HOM05D000727 ORTHO05D000541 9.8e-07 57.8 187 27.3
MSTRG.13668 Avicennia marina HOM05D000727 ORTHO05D000541 1.3e-06 57.4 185 28.6
A03p43050 Brassica napus HOM05D007902 ORTHO05D009839 1.7e-06 57.0 77 42.9
MSTRG.2077 Avicennia marina HOM05D000727 ORTHO05D000541 2.8e-06 56.2 176 29.0
A09p12450 Brassica napus HOM05D007902 ORTHO05D009839 2.8e-06 56.2 77 42.9
BraA07t29812Z Brassica rapa HOM05D007902 ORTHO05D009839 2.8e-06 56.2 77 42.9
BraA02t09046Z Brassica rapa HOM05D000727 ORTHO05D000541 3.7e-06 55.8 202 25.7
AT5G23420 Arabidopsis thaliana HOM05D000727 ORTHO05D000541 8.3e-06 54.7 182 27.5
A10p30870 Brassica napus HOM05D000044 ORTHO05D000051 8.3e-06 54.7 68 41.2
DCAR_030351 Daucus carota HOM05D000727 ORTHO05D000541 8.3e-06 54.7 163 28.2
Migut.E00666 Erythranthe guttata HOM05D000727 ORTHO05D000541 8.3e-06 54.7 187 27.3


User provided reference genes

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