Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0346 Trochodendron aralioides HOM05D000001 ORTHO05D415451 5.3e-93 344.4 174 100.0
TAR369G0593 Trochodendron aralioides HOM05D000001 ORTHO05D010412 1.2e-12 77.4 45 84.4
CiPaw.13G171800 Carya illinoinensis HOM05D000001 ORTHO05D010412 2.5e-10 69.7 43 74.4
Actinidia06295 Actinidia chinensis HOM05D001109 ORTHO05D010412 5.6e-10 68.6 60 63.3
Prupe.6G010900 Prunus persica HOM05D000001 ORTHO05D010412 5.6e-10 68.6 57 63.2
FvH4_3g44710 Fragaria vesca HOM05D000001 ORTHO05D010412 1.2e-09 67.4 53 64.2
FAN11G3940 Fragaria x ananassa HOM05D000001 ORTHO05D010412 1.2e-09 67.4 53 64.2
FAN16G3320 Fragaria x ananassa HOM05D000001 ORTHO05D010412 1.2e-09 67.4 63 57.1
FAN25G0198 Fragaria x ananassa HOM05D000001 ORTHO05D010412 1.6e-09 67.0 60 56.7
MBI19_g17429_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010412 2.8e-09 66.2 61 57.4
FAN21G0865 Fragaria x ananassa HOM05D000001 ORTHO05D010412 6.2e-09 65.1 57 56.1
RcHm_v2.0_Chr5g0081411 Rosa chinensis HOM05D000001 ORTHO05D010412 1.4e-08 63.9 42 69.0
Ciclev10018300m.g Citrus clementina HOM05D000001 ORTHO05D010412 8.9e-08 61.2 47 61.7
Cpa.g.sc119.88 Carica papaya HOM05D000001 ORTHO05D010412 1.2e-07 60.8 39 71.8
Cfa009622 Carpinus fangiana HOM05D000001 ORTHO05D010412 1.2e-07 60.8 64 57.8
Aqoxy1G00157 Aquilegia oxysepala HOM05D000001 ORTHO05D010412 2.0e-07 60.1 38 73.7
TAR369G0854 Trochodendron aralioides HOM05D000001 ORTHO05D010412 2.6e-07 59.7 73 53.4
TAR636G1449 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.6e-07 59.7 42 59.5
Prupe.5G241400 Prunus persica HOM05D000001 ORTHO05D000003 3.4e-07 59.3 40 60.0
ECA236G0048 Erigeron canadensis HOM05D000001 ORTHO05D010412 5.8e-07 58.5 40 62.5
HanXRQChr06g0178021 Helianthus annuus HOM05D000001 ORTHO05D010412 5.8e-07 58.5 41 65.9
Haze_22991 Corylus avellana HOM05D000001 ORTHO05D010412 7.5e-07 58.2 63 55.6
QL03p063618 Quercus lobata HOM05D000001 ORTHO05D338241 7.5e-07 58.2 102 37.3
Rhsim01G0185700 Rhododendron simsii HOM05D000001 ORTHO05D010412 9.8e-07 57.8 47 61.7
QL01p010315 Quercus lobata HOM05D000001 ORTHO05D010412 1.3e-06 57.4 39 71.8
GSVIVG01025389001 Vitis vinifera HOM05D000001 ORTHO05D010412 1.3e-06 57.4 42 66.7
vmacro13379 Vaccinium macrocarpon HOM05D000001 ORTHO05D010412 1.7e-06 57.0 54 59.3
GSVIVG01029382001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.7e-06 57.0 42 50.0
Atru.chr3.2206 Acer truncatum HOM05D000001 ORTHO05D010412 2.2e-06 56.6 38 68.4
MBI06_g41342_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 2.2e-06 56.6 44 50.0
Cpa.g.sc336.7 Carica papaya HOM05D000001 ORTHO05D000003 2.9e-06 56.2 42 52.4
Ah.01g009450 Amaranthus hybridus HOM05D000001 ORTHO05D010525 4.9e-06 55.5 44 52.3
CSS0006525 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D010412 4.9e-06 55.5 41 65.9
CiPaw.15G151600 Carya illinoinensis HOM05D000001 ORTHO05D000003 4.9e-06 55.5 44 52.3
AUR62010107 Chenopodium quinoa HOM05D000001 ORTHO05D010525 4.9e-06 55.5 44 54.5
AUR62013101 Chenopodium quinoa HOM05D000001 ORTHO05D010525 4.9e-06 55.5 44 54.5
Sed0024360 Sechium edule HOM05D000001 ORTHO05D010525 4.9e-06 55.5 46 47.8
ClCG03G006600 Citrullus lanatus HOM05D000001 ORTHO05D010525 6.4e-06 55.1 46 47.8
Lj2g0026635 Lotus japonicus HOM05D000001 ORTHO05D009784 8.3e-06 54.7 62 43.5
MBI19_g25234_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 8.3e-06 54.7 42 52.4
Manes.03G170800 Manihot esculenta HOM05D000001 ORTHO05D000003 8.3e-06 54.7 44 54.5
Nn1g02829 Nelumbo nucifera HOM05D000001 ORTHO05D000003 8.3e-06 54.7 44 52.3
PSO017G5169 Papaver somniferum HOM05D000001 ORTHO05D000003 8.3e-06 54.7 42 54.8
Rhsim13G0116800 Rhododendron simsii HOM05D000001 ORTHO05D010525 8.3e-06 54.7 44 50.0


User provided reference genes

Program Settings