Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 0.0e+00 1189.1 706 100.0
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 5.9e-159 565.5 710 48.6
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 2.2e-158 563.5 708 50.0
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 3.2e-157 559.7 701 47.9
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.4e-155 554.3 511 61.8
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 3.3e-154 549.7 704 48.3
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 2.8e-153 546.6 707 47.8
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.2e-150 537.0 730 46.6
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 5.5e-149 532.3 500 58.8
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 3.6e-148 529.6 711 46.6
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 6.1e-140 502.3 708 45.1
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 7.5e-138 495.4 738 47.2
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 4.9e-137 492.7 534 53.4
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.1e-136 491.5 494 54.3
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.4e-136 491.1 679 45.2
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 2.4e-136 490.3 494 57.3
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 2.4e-136 490.3 500 56.6
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 4.1e-136 489.6 532 52.6
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 2.3e-134 483.8 513 55.0
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 2.9e-134 483.4 620 47.6
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 2.9e-134 483.4 402 62.7
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 5.0e-134 482.6 488 54.9
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 1.9e-133 480.7 496 55.8
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 6.1e-132 475.7 518 53.5
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.4e-131 474.6 523 51.6
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.8e-131 474.2 518 53.9
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 2.3e-131 473.8 523 51.6
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 5.2e-131 472.6 502 53.0
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 1.5e-130 471.1 381 65.4
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 5.7e-130 469.2 498 54.2
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 4.1e-128 463.0 527 52.0
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 5.4e-128 462.6 492 52.2
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 7.0e-128 462.2 493 55.2
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 3.5e-127 459.9 369 64.8
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 7.8e-127 458.8 371 64.7
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 3.0e-126 456.8 496 54.6
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.2e-124 451.4 673 44.0
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 4.7e-124 449.5 344 67.4
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 1.0e-123 448.4 509 51.1
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 5.2e-123 446.0 417 56.8
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 1.7e-121 441.0 382 60.5
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 2.9e-121 440.3 367 64.0
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.9e-120 437.6 481 51.8
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.9e-120 437.6 382 60.7
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 5.4e-120 436.0 376 60.1
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 9.2e-120 435.3 465 53.8
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 1.6e-119 434.5 346 65.0
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 2.7e-119 433.7 382 60.2
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.7e-118 431.0 464 51.7
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.3e-118 430.6 464 52.2
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 3.0e-118 430.3 456 53.3
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 5.0e-118 429.5 464 52.2
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 8.6e-118 428.7 424 55.7
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.9e-117 427.6 346 65.3
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 4.3e-117 426.4 403 56.6
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 3.6e-116 423.3 384 57.8
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.1e-115 421.8 492 51.2
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 1.4e-115 421.4 345 63.5
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.8e-115 421.0 525 46.3
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 2.0e-114 417.5 317 67.2
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 2.6e-114 417.2 401 55.4
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 2.6e-114 417.2 490 50.0
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 4.4e-114 416.4 341 64.5
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 4.4e-114 416.4 442 52.3
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 7.5e-114 415.6 546 46.2
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.7e-113 414.5 819 37.1
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 1.7e-113 414.5 461 51.8
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.2e-113 414.1 384 58.1
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 4.9e-113 412.9 383 57.4
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 6.4e-113 412.5 307 66.8
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 6.4e-113 412.5 383 57.7
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 1.1e-112 411.8 498 49.6
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 1.9e-112 411.0 383 57.7
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 2.4e-112 410.6 345 60.3
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 3.2e-112 410.2 392 55.9
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 5.4e-112 409.5 447 51.5
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 3.5e-111 406.8 426 54.2
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 5.1e-110 402.9 414 53.6
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 6.6e-110 402.5 350 60.0
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 5.6e-109 399.4 368 57.1
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 7.3e-109 399.1 360 58.3
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 7.3e-109 399.1 396 54.0
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.2e-108 398.3 464 49.6
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 6.2e-108 396.0 360 59.2
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 6.2e-108 396.0 557 44.2
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 3.1e-107 393.7 348 58.9
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 3.1e-107 393.7 348 58.9
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 5.2e-107 392.9 364 57.1
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 2.6e-106 390.6 348 58.6
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 9.9e-106 388.7 361 55.1
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.7e-105 387.9 408 53.2
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 4.9e-105 386.3 351 57.8
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 4.9e-105 386.3 351 57.8
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 1.4e-104 384.8 351 57.3
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.9e-104 384.4 364 56.9
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.9e-104 384.4 351 57.5
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 7.1e-104 382.5 318 62.9
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 1.6e-103 381.3 386 51.8
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 6.0e-103 379.4 374 55.9
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 8.6e-102 375.6 431 49.4
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 2.5e-101 374.0 351 57.0
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.1e-93 348.6 311 58.5
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 1.8e-91 341.3 358 51.4
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 5.8e-90 336.3 449 43.4
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 7.6e-90 335.9 205 80.5
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 2.1e-84 317.8 345 48.7
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 2.1e-79 301.2 345 47.2
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 3.0e-78 297.4 239 65.7
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.5e-77 294.3 265 60.8
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.8e-70 271.6 316 46.2
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 7.6e-66 256.1 235 54.5
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 1.3e-65 255.4 468 39.1
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 9.3e-64 249.2 209 60.3
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 2.3e-62 244.6 296 43.6
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 1.9e-61 241.5 307 45.3
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.0e-57 229.2 537 35.0
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 2.2e-52 211.5 341 41.3
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 9.7e-45 186.0 129 74.4
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.8e-38 165.2 113 71.7
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 5.7e-37 160.2 141 58.9
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 5.2e-30 137.1 155 51.6
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 3.7e-28 131.0 158 49.4
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 1.6e-26 125.6 137 50.4
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 5.9e-26 123.6 82 72.0
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.9e-24 118.6 106 57.5
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 4.2e-24 117.5 128 46.1
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.6e-23 115.5 96 61.5
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 3.0e-22 111.3 257 27.2
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.6e-15 89.0 59 72.9
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 8.0e-15 86.7 56 76.8
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 1.8e-14 85.5 180 28.3
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 2.9e-12 78.2 54 74.1
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 2.9e-12 78.2 54 74.1


User provided reference genes

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