Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.2e-252 875.2 452 100.0
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 4.1e-222 774.6 438 93.4
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.7e-181 639.0 403 84.6
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 1.7e-172 609.8 405 81.2
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 8.7e-172 607.4 389 82.5
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 1.1e-169 600.5 397 80.9
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 5.8e-168 594.7 395 80.5
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 5.8e-168 594.7 389 81.5
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 7.1e-166 587.8 389 80.5
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 2.7e-165 585.9 389 80.7
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 1.3e-164 583.6 386 79.3
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 6.6e-164 581.3 398 79.4
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 1.1e-163 580.5 393 77.9
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 1.5e-163 580.1 398 79.1
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 7.3e-163 577.8 397 78.3
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 1.6e-162 576.6 393 78.6
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.4e-161 573.5 397 77.3
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 5.3e-161 571.6 397 77.3
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 9.0e-161 570.9 404 75.0
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 9.0e-161 570.9 397 75.8
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 9.0e-161 570.9 397 78.1
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.5e-160 570.1 397 77.1
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 5.8e-160 568.2 390 77.7
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 1.7e-159 566.6 398 76.4
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 2.2e-159 566.2 389 77.9
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 2.9e-159 565.8 389 76.3
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 2.9e-159 565.8 396 76.8
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 3.8e-159 565.5 395 77.2
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 1.1e-158 563.9 389 75.3
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 2.4e-158 562.8 388 77.6
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 4.2e-158 562.0 397 75.3
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 5.4e-158 561.6 397 76.8
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 9.3e-158 560.8 409 75.1
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 2.1e-157 559.7 404 75.0
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.1e-157 559.7 383 77.8
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 7.9e-157 557.8 393 76.3
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 1.0e-156 557.4 396 76.3
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 1.0e-156 557.4 394 76.6
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 2.3e-156 556.2 389 74.3
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 6.7e-156 554.7 388 77.1
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 1.1e-155 553.9 403 73.2
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 1.5e-155 553.5 393 75.6
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 3.3e-155 552.4 393 75.1
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 3.3e-155 552.4 388 76.5
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 5.6e-155 551.6 386 78.0
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 7.4e-155 551.2 398 74.6
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 7.4e-155 551.2 424 72.9
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 9.6e-155 550.8 389 76.6
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 2.8e-154 549.3 398 75.1
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 3.7e-154 548.9 390 76.4
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 6.2e-154 548.1 393 74.8
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 8.1e-154 547.7 393 74.0
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 8.1e-154 547.7 392 75.3
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 1.1e-153 547.4 405 74.1
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 1.1e-153 547.4 389 73.8
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.4e-153 547.0 398 74.6
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 1.4e-153 547.0 394 76.1
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 3.1e-153 545.8 390 75.6
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 5.3e-153 545.0 393 74.8
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 9.0e-153 544.3 398 73.4
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.2e-152 543.9 390 75.6
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 1.5e-152 543.5 390 74.6
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 1.5e-152 543.5 393 75.1
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 1.5e-152 543.5 393 74.6
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 2.0e-152 543.1 393 74.3
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 2.0e-152 543.1 390 74.4
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 2.6e-152 542.7 390 74.4
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 2.6e-152 542.7 390 74.4
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 2.6e-152 542.7 398 73.4
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.4e-152 542.3 389 75.1
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 5.8e-152 541.6 395 73.4
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 7.6e-152 541.2 405 72.3
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 9.9e-152 540.8 395 73.4
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 9.9e-152 540.8 395 73.4
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 1.3e-151 540.4 405 71.6
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 2.9e-151 539.3 395 73.7
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 3.8e-151 538.9 395 72.9
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 3.8e-151 538.9 405 71.4
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 4.9e-151 538.5 395 74.4
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 4.9e-151 538.5 389 74.6
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 3.2e-150 535.8 389 73.5
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 9.3e-150 534.3 395 72.7
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 9.3e-150 534.3 391 73.7
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.2e-149 533.9 397 72.5
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 1.2e-149 533.9 390 73.3
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 2.1e-149 533.1 390 73.3
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 2.1e-149 533.1 407 71.7
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 6.0e-149 531.6 394 72.8
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 3.9e-148 528.9 361 77.6
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 6.7e-148 528.1 395 72.7
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 1.9e-147 526.6 402 72.9
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 2.5e-147 526.2 410 70.0
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 1.6e-146 523.5 392 71.9
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 8.2e-146 521.2 403 69.5
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 3.1e-145 519.2 394 73.6
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 5.3e-145 518.5 366 75.1
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 2.6e-144 516.2 419 67.8
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 9.3e-142 507.7 366 74.6
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.3e-140 503.8 392 70.7
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 7.4e-139 498.0 400 67.2
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 6.9e-137 491.5 383 70.5
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 5.0e-135 485.3 372 68.5
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 2.7e-133 479.6 393 64.9
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 3.1e-129 466.1 391 64.7
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 4.1e-129 465.7 292 85.3
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 8.2e-122 441.4 392 62.5
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 8.2e-114 414.8 364 65.1
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 1.6e-109 400.6 346 62.7
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 1.8e-108 397.1 261 81.6
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 2.7e-104 383.3 312 64.7
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 2.2e-103 380.2 392 54.3
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 9.4e-102 374.8 390 60.0
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 6.8e-100 368.6 224 87.9
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 4.8e-98 362.5 389 54.2
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 3.8e-95 352.8 404 52.5
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 1.9e-94 350.5 398 51.8
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 1.1e-70 271.6 181 81.2
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 4.0e-68 263.1 171 83.0
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 9.9e-67 258.5 182 79.1
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 3.9e-63 246.5 180 72.2
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 4.4e-59 233.0 175 69.1
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.1e-54 218.4 190 63.2
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 8.1e-53 212.2 204 57.8
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.4e-41 174.1 407 34.6
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 8.1e-37 159.1 140 62.1
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 8.1e-37 159.1 137 63.5
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 3.4e-35 153.7 134 60.4
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 1.0e-31 142.1 154 57.1
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 6.2e-29 132.9 104 68.3
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 5.3e-28 129.8 88 72.7
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 2.3e-23 114.4 84 71.4
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 1.1e-22 112.1 85 68.2
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 3.3e-22 110.5 117 57.3
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 3.1e-20 104.0 117 54.7
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 1.2e-19 102.1 93 58.1
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 1.5e-19 101.7 117 53.8
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 3.4e-19 100.5 77 70.1
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 1.7e-13 81.6 64 67.2
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 2.8e-13 80.9 70 64.3
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 4.8e-13 80.1 64 65.6
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 6.3e-13 79.7 64 65.6
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 8.2e-13 79.3 64 64.1
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 1.4e-12 78.6 58 70.7
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 1.4e-12 78.6 61 65.6
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 9.1e-12 75.9 45 82.2
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 4.5e-11 73.6 171 33.3
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 2.2e-10 71.2 66 60.6
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 2.2e-10 71.2 56 69.6
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 8.5e-10 69.3 46 65.2
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 2.5e-09 67.8 76 52.6
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 3.2e-09 67.4 183 31.1
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 1.6e-08 65.1 45 73.3
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 1.8e-07 61.6 52 59.6
BcaC07g37638 Brassica carinata HOM05D004269 ORTHO05D016737 1.8e-07 61.6 45 66.7
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 8.8e-07 59.3 41 70.7
C06p14100 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-06 58.9 46 65.2
Lsat_1_v5_gn_3_20180 Lactuca sativa HOM05D000819 ORTHO05D000661 2.0e-06 58.2 63 54.0
BcaB08g35223 Brassica carinata HOM05D004269 ORTHO05D016737 4.4e-06 57.0 38 71.1


User provided reference genes

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