Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 1.0e-177 626.7 338 100.0
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.7e-69 266.5 324 54.6
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 3.0e-68 263.1 290 58.6
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.5e-67 260.0 262 58.8
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.1e-65 254.6 289 57.4
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 3.3e-59 233.0 343 51.6
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 9.7e-59 231.5 314 52.2
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 6.9e-57 225.3 280 52.5
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 2.6e-56 223.4 304 50.3
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 7.6e-56 221.9 278 53.2
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.7e-55 220.7 304 50.3
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.7e-55 220.7 311 49.8
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 2.2e-55 220.3 281 51.2
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.6e-53 214.2 310 48.4
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 2.7e-53 213.4 279 49.5
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 3.6e-53 213.0 313 47.3
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 3.6e-53 213.0 295 51.2
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 5.1e-52 209.1 289 49.5
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 6.7e-52 208.8 290 49.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 3.3e-51 206.5 295 48.8
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 5.7e-51 205.7 305 48.5
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.3e-50 202.2 288 47.9
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.1e-49 199.5 285 48.1
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.9e-49 198.7 286 49.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.6e-48 196.8 312 45.5
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.6e-48 196.8 280 48.2
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 7.7e-48 195.3 296 46.3
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 1.0e-47 194.9 315 44.4
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.3e-47 194.5 307 45.6
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.7e-47 194.1 307 45.9
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 7.2e-46 188.7 347 44.1
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.2e-45 188.0 293 48.5
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.2e-45 188.0 318 46.5
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 6.1e-45 185.7 313 46.0
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.0e-44 184.9 265 47.2
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.0e-44 184.9 335 41.2
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.8e-44 184.1 316 43.0
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 3.9e-44 183.0 255 48.6
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 6.7e-44 182.2 304 46.4
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 2.0e-43 180.6 251 48.2
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.0e-43 180.6 281 45.9
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 4.4e-43 179.5 262 46.6
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 7.4e-43 178.7 269 45.7
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.3e-42 177.9 257 48.2
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.7e-42 177.6 209 55.0
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 3.7e-42 176.4 301 45.8
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.5e-40 171.0 261 45.6
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.6e-40 170.2 260 46.2
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.6e-40 170.2 326 39.6
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 6.5e-39 165.6 264 43.9
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 4.2e-38 162.9 291 42.6
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 9.4e-38 161.8 291 44.0
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.6e-37 161.0 199 52.8
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 3.6e-37 159.8 209 51.7
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 3.9e-36 156.4 273 45.1
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 5.2e-36 156.0 258 44.2
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.6e-35 153.7 209 50.2
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.7e-34 151.0 186 54.3
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 2.2e-34 150.6 262 43.1
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.8e-34 150.2 280 44.3
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 3.7e-34 149.8 263 44.9
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 8.2e-34 148.7 293 42.7
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 5.3e-33 146.0 385 37.1
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 9.1e-33 145.2 295 40.7
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 4.5e-32 142.9 369 35.8
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.0e-31 141.7 179 50.8
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 3.8e-31 139.8 225 47.1
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 2.1e-29 134.0 278 40.3
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 8.0e-29 132.1 172 50.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 8.0e-29 132.1 172 50.6
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 8.0e-29 132.1 144 57.6
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 1.0e-28 131.7 165 53.3
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.3e-28 130.6 144 57.6
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 6.7e-28 129.0 162 51.9
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.5e-27 127.9 183 48.1
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 3.3e-27 126.7 298 36.6
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.3e-27 126.7 158 51.9
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 9.7e-27 125.2 197 44.7
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 2.2e-26 124.0 239 42.3
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.1e-25 121.7 144 54.2
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 4.1e-25 119.8 348 35.1
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.6e-24 117.9 197 43.1
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 5.9e-24 115.9 249 36.5
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 7.7e-24 115.5 196 43.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 1.0e-23 115.2 161 47.2
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 2.9e-23 113.6 206 42.2
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 1.2e-21 108.2 267 38.2
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.1e-21 107.5 178 43.8
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 2.1e-21 107.5 301 34.9
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.1e-21 107.5 200 42.5
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 2.7e-21 107.1 207 43.0
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 4.7e-21 106.3 183 40.4
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 1.8e-20 104.4 152 46.7
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.8e-20 104.4 231 39.8
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.8e-20 104.4 174 42.5
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 7.5e-19 99.0 299 32.1
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 7.5e-19 99.0 102 56.9
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 9.8e-19 98.6 126 48.4
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 1.7e-18 97.8 242 37.6
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 2.2e-18 97.4 115 52.2
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.8e-18 97.1 151 43.0
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 3.7e-18 96.7 171 45.0
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 1.8e-17 94.4 116 51.7
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 4.1e-17 93.2 124 50.0
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 3.5e-16 90.1 93 58.1
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.7e-15 87.8 116 50.0
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 2.9e-15 87.0 104 51.0
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 5.0e-15 86.3 104 50.0
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 8.6e-15 85.5 104 50.0
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 7.2e-14 82.4 106 46.2
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 9.5e-14 82.0 194 39.2
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 3.6e-13 80.1 120 45.8
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 5.2e-12 76.3 159 38.4
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.5e-11 74.7 211 32.2
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 2.6e-11 73.9 278 28.8
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 3.4e-11 73.6 150 39.3
BcaC05g25849 Brassica carinata HOM05D005512 ORTHO05D006716 9.8e-11 72.0 158 38.6
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 9.8e-11 72.0 140 40.0
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 1.7e-10 71.2 295 30.8
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 8.3e-10 68.9 140 40.0
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 1.1e-09 68.6 110 44.5
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 2.4e-09 67.4 151 38.4
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 9.2e-09 65.5 149 36.9
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 1.7e-07 61.2 163 31.9
Actinidia02438 Actinidia chinensis HOM05D005512 ORTHO05D006716 8.6e-07 58.9 95 44.2
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 2.5e-06 57.4 120 40.0


User provided reference genes

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