Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0316 Trochodendron aralioides HOM05D000711 ORTHO05D034070 5.4e-110 401.4 258 100.0
Rhsim13G0210800 Rhododendron simsii HOM05D000711 ORTHO05D000545 9.4e-22 108.2 101 67.3
Dinv38627 Davidia involucrata HOM05D000711 ORTHO05D034070 4.7e-21 105.9 128 53.9
Cpa.g.sc482.2 Carica papaya HOM05D000711 ORTHO05D034070 3.3e-19 99.8 99 60.6
CSS0013588 Camellia sinensis var. sinensis HOM05D000711 ORTHO05D000545 2.2e-18 97.1 92 72.8
Lj1C285T9 Lonicera japonica HOM05D000711 ORTHO05D000545 2.2e-18 97.1 84 66.7
Haze_23223 Corylus avellana HOM05D000711 ORTHO05D000545 8.2e-18 95.1 101 58.4
Sabra09G0053600 Salix brachista HOM05D000711 ORTHO05D000545 1.8e-17 94.0 99 54.5
vmacro04024 Vaccinium macrocarpon HOM05D000711 ORTHO05D000545 3.1e-17 93.2 101 63.4
ClCG02G022900 Citrullus lanatus HOM05D000711 ORTHO05D000545 7.0e-17 92.0 94 63.8
MELO3C014564.2 Cucumis melo HOM05D000711 ORTHO05D000545 1.6e-16 90.9 95 56.8
MBI13_g06295_MAGBIO Magnolia biondii HOM05D000711 ORTHO05D000545 1.0e-15 88.2 97 63.9
Dinv36173 Davidia involucrata HOM05D000711 ORTHO05D000545 8.5e-15 85.1 42 90.5
TAR369G0644 Trochodendron aralioides HOM05D000711 ORTHO05D000545 4.2e-14 82.8 42 85.7
EL10Ac4g10149 Beta vulgaris HOM05D000711 ORTHO05D000545 5.5e-14 82.4 107 47.7
CDE11G0414 Ceratophyllum demersum HOM05D000711 ORTHO05D000545 1.0e-12 78.2 112 49.1
HPP92_025146 Vanilla planifolia HOM05D000711 ORTHO05D000545 1.8e-12 77.4 102 58.8
ECA238G1262 Erigeron canadensis HOM05D000711 ORTHO05D000545 4.0e-12 76.3 119 46.2
Lsat_1_v5_gn_3_110380 Lactuca sativa HOM05D000711 ORTHO05D000545 4.0e-12 76.3 105 50.5
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 5.2e-12 75.9 120 45.8
Hund21984 Selenicereus undatus HOM05D000711 ORTHO05D000545 1.2e-11 74.7 91 52.7
CANSAT21G1437 Cannabis sativa HOM05D000711 ORTHO05D000545 2.0e-11 73.9 39 87.2
Aa31LG3G14900 Aethionema arabicum HOM05D000711 ORTHO05D000545 2.8e-10 70.1 111 45.0
BraA02t05126Z Brassica rapa HOM05D000711 ORTHO05D000545 6.3e-10 68.9 98 48.0
PGSC0003DMG400009453 Solanum tuberosum HOM05D000711 ORTHO05D000545 6.3e-10 68.9 102 51.0
AL6G23130 Arabidopsis lyrata HOM05D000711 ORTHO05D000545 8.3e-10 68.6 109 45.0
C02p05690 Brassica napus HOM05D000711 ORTHO05D000545 8.3e-10 68.6 107 44.9
CAN.G96.12 Capsicum annuum HOM05D000711 ORTHO05D000545 1.8e-09 67.4 102 59.8
VMungo0647G0330 Vigna mungo HOM05D000711 ORTHO05D000545 1.8e-09 67.4 102 49.0
Nitab4.5_0000730g0050 Nicotiana tabacum HOM05D000711 ORTHO05D000545 2.4e-09 67.0 126 47.6
Nitab4.5_0001500g0080 Nicotiana tabacum HOM05D000711 ORTHO05D000545 2.4e-09 67.0 127 49.6
Sp6g31310 Schrenkiella parvula HOM05D000711 ORTHO05D000545 2.4e-09 67.0 114 43.0
BcaNung01196 Brassica carinata HOM05D000711 ORTHO05D000545 3.1e-09 66.6 109 44.0
Hma1.2p1_0129F.1_g060135 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 3.1e-09 66.6 34 85.3
CARHR200780 Cardamine hirsuta HOM05D000711 ORTHO05D000545 4.1e-09 66.2 108 44.4
VMungo0540G0402 Vigna mungo HOM05D000711 ORTHO05D000545 5.4e-09 65.9 93 45.2
Gohir.D08G020200 Gossypium hirsutum HOM05D000711 ORTHO05D000545 7.0e-09 65.5 98 46.9
Gorai.004G014800 Gossypium raimondii HOM05D000711 ORTHO05D000545 7.0e-09 65.5 98 46.9
SGA_v2.0_scaffold3G01449 Striga asiatica HOM05D000711 ORTHO05D000545 9.1e-09 65.1 101 44.6
TPR.G19361 Trifolium pratense HOM05D000711 ORTHO05D000545 2.7e-08 63.5 92 52.2
Medtr5g089750 Medicago truncatula HOM05D000711 ORTHO05D000545 4.5e-08 62.8 96 52.1
CiPaw.14G113700 Carya illinoinensis HOM05D000711 ORTHO05D000545 1.0e-07 61.6 41 73.2
Lsat_1_v5_gn_2_33180 Lactuca sativa HOM05D000711 ORTHO05D000545 1.5e-06 57.8 39 79.5
RcHm_v2.0_Chr5g0050641 Rosa chinensis HOM05D000711 ORTHO05D000545 1.5e-06 57.8 37 70.3
Hma1.2p1_2742F.1_g327760 Hydrangea macrophylla HOM05D000711 ORTHO05D000545 1.9e-06 57.4 29 86.2
CiPaw.13G151400 Carya illinoinensis HOM05D000711 ORTHO05D000545 2.5e-06 57.0 36 80.6
Ca_06216_v3 Cicer arietinum L. HOM05D000711 ORTHO05D000545 3.2e-06 56.6 98 46.9
CsaV3_6G039030 Cucumis sativus L. HOM05D000711 ORTHO05D000545 4.2e-06 56.2 38 68.4
MD03G1166900 Malus domestica HOM05D000711 ORTHO05D000545 9.4e-06 55.1 43 67.4


User provided reference genes

Program Settings