Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 6.1e-68 260.8 139 100.0
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 5.8e-42 174.5 141 68.1
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 5.4e-40 167.9 138 68.8
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.1e-37 160.2 137 68.6
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 8.1e-36 154.1 142 63.4
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.4e-35 153.3 139 64.7
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 1.2e-34 150.2 137 62.8
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 3.4e-34 148.7 140 67.1
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 9.8e-34 147.1 143 61.5
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 2.2e-33 146.0 141 61.7
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 2.2e-33 146.0 136 58.8
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 2.2e-33 146.0 140 61.4
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 1.1e-32 143.7 131 58.8
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 1.9e-32 142.9 141 61.0
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 2.4e-32 142.5 145 59.3
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 3.5e-31 138.7 140 60.7
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 3.5e-31 138.7 135 58.5
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 3.5e-31 138.7 145 57.2
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 4.6e-31 138.3 135 57.8
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 6.0e-31 137.9 138 59.4
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.3e-30 136.7 135 56.3
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 6.6e-30 134.4 145 58.6
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 6.6e-30 134.4 145 58.6
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 1.5e-29 133.3 141 57.4
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 4.3e-29 131.7 146 57.5
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 4.3e-29 131.7 145 57.9
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 5.6e-29 131.3 134 56.0
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 7.3e-29 131.0 151 53.6
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 1.6e-28 129.8 143 56.6
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 8.1e-28 127.5 146 54.1
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 1.1e-27 127.1 135 52.6
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 3.1e-27 125.6 146 54.1
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 5.2e-27 124.8 144 56.9
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 1.2e-26 123.6 142 55.6
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 1.5e-26 123.2 142 56.3
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.5e-26 123.2 142 56.3
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.5e-26 123.2 142 56.3
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 1.5e-26 123.2 140 57.1
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 3.4e-26 122.1 138 55.8
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 3.4e-26 122.1 140 52.9
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 3.4e-26 122.1 136 55.1
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 5.8e-26 121.3 140 52.9
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 9.9e-26 120.6 142 55.6
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 9.9e-26 120.6 132 56.1
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 9.9e-26 120.6 132 56.1
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 2.9e-25 119.0 145 54.5
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 6.4e-25 117.9 142 54.2
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.1e-24 117.1 139 51.8
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 1.1e-24 117.1 135 49.6
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 1.9e-24 116.3 141 51.8
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 1.9e-24 116.3 101 64.4
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 3.2e-24 115.5 141 50.4
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 4.1e-24 115.2 149 48.3
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 9.2e-24 114.0 136 53.7
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 1.6e-23 113.2 138 51.4
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 1.6e-23 113.2 138 51.4
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 4.6e-23 111.7 136 52.9
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 6.0e-23 111.3 139 51.1
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 7.8e-23 110.9 144 50.0
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.3e-22 110.2 133 52.6
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 1.3e-22 110.2 140 52.9
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 1.7e-22 109.8 136 50.0
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 2.3e-22 109.4 137 51.1
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 2.3e-22 109.4 137 51.1
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 2.3e-22 109.4 137 51.1
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 2.3e-22 109.4 144 49.3
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 3.0e-22 109.0 127 50.4
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 5.1e-22 108.2 137 50.4
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 5.1e-22 108.2 144 49.3
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.1e-21 107.1 163 46.6
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 1.5e-21 106.7 129 51.2
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 1.5e-21 106.7 137 46.7
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 1.9e-21 106.3 135 48.1
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 2.5e-21 105.9 141 48.9
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 2.5e-21 105.9 140 47.1
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 2.5e-21 105.9 132 49.2
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 2.5e-21 105.9 132 49.2
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 3.3e-21 105.5 134 48.5
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 4.3e-21 105.1 135 52.6
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 4.3e-21 105.1 137 51.8
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 5.6e-21 104.8 139 51.1
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 9.6e-21 104.0 141 50.4
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 1.2e-20 103.6 140 48.6
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 2.1e-20 102.8 131 46.6
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 3.6e-20 102.1 136 49.3
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 4.7e-20 101.7 136 50.7
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 6.2e-20 101.3 136 48.5
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 1.4e-19 100.1 141 46.8
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 1.4e-19 100.1 147 44.9
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 3.1e-19 99.0 139 47.5
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 5.2e-19 98.2 140 47.1
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 2.6e-18 95.9 135 46.7
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 3.4e-18 95.5 145 46.9
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 2.1e-15 86.3 134 46.3
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 4.6e-15 85.1 145 40.7
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 3.0e-14 82.4 145 40.0
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 3.9e-14 82.0 135 41.5
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 4.3e-13 78.6 132 39.4
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 4.3e-13 78.6 156 39.1
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 4.8e-12 75.1 99 45.5
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 1.4e-11 73.6 166 38.6
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 1.4e-11 73.6 163 33.1
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 5.3e-11 71.6 114 49.1
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 1.2e-10 70.5 93 44.1
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 2.2e-09 66.2 130 37.7
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 1.2e-07 60.5 135 37.0
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 1.6e-07 60.1 34 73.5
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 1.3e-06 57.0 96 37.5
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 5.1e-06 55.1 150 29.3


User provided reference genes

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