Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 9.1e-150 533.5 260 100.0
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.3e-129 465.7 257 86.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 6.6e-124 447.6 257 80.9
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 5.6e-123 444.5 257 79.8
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.1e-121 440.3 259 78.4
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 1.2e-120 436.8 260 79.6
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 4.9e-119 431.4 260 78.1
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 6.4e-119 431.0 256 77.3
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.4e-118 429.9 257 78.6
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 2.4e-118 429.1 258 76.7
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.1e-118 428.3 257 78.6
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 7.1e-118 427.6 274 74.5
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 9.2e-118 427.2 259 78.0
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 2.7e-117 425.6 257 77.8
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.3e-116 423.3 246 79.3
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 1.7e-116 422.9 255 77.3
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.1e-116 421.4 248 80.2
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.5e-115 419.1 248 79.4
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 3.3e-115 418.7 257 74.3
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 7.3e-115 417.5 247 78.5
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-114 416.8 248 79.0
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.8e-113 412.9 246 77.6
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 4.0e-113 411.8 257 75.1
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.5e-112 409.8 259 73.0
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 7.8e-109 397.5 246 72.8
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 2.3e-108 396.0 259 71.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.0e-108 395.6 254 72.0
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.6e-108 394.4 257 70.8
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 6.6e-108 394.4 257 70.8
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.5e-107 392.5 257 70.8
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 7.3e-107 391.0 247 74.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.2e-106 387.9 253 68.8
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 1.1e-105 387.1 240 72.9
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.4e-105 386.7 244 71.3
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.4e-105 386.7 281 65.8
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.8e-105 386.3 257 69.6
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.8e-104 381.3 322 60.9
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 6.4e-103 377.9 256 68.8
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.4e-102 376.7 274 64.6
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.3e-99 365.5 261 65.1
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.6e-96 355.9 211 80.6
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 8.4e-95 350.9 280 59.6
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.3e-92 343.6 260 62.3
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.8e-92 343.2 251 66.9
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 8.7e-92 340.9 218 70.2
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.9e-91 339.7 252 62.3
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 8.1e-90 334.3 212 72.2
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 2.6e-88 329.3 258 58.5
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 9.9e-88 327.4 206 76.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.4e-86 322.8 259 59.8
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 2.3e-84 316.2 248 62.1
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.4e-81 307.0 249 60.6
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.6e-80 302.8 180 78.3
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.0e-77 291.6 259 52.9
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.8e-76 290.0 234 60.3
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.3e-76 289.7 241 58.1
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.9e-75 286.6 213 66.7
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 1.3e-74 283.9 188 70.2
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 1.4e-73 280.4 174 70.1
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 9.0e-73 277.7 244 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.1e-69 266.5 256 52.0
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.7e-69 266.2 256 50.0
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.7e-68 261.5 256 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 3.3e-67 259.2 256 49.6
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.7e-67 258.5 256 48.8
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 2.2e-66 256.5 159 76.1
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.7e-66 255.8 256 49.2
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 4.1e-65 252.3 154 72.7
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.3e-65 251.9 257 47.5
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 3.2e-62 242.7 156 69.9
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.1e-57 226.1 228 51.3
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 5.3e-49 198.7 122 71.3
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 3.5e-48 196.1 256 37.5
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.3e-47 194.1 259 37.8
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.8e-47 192.6 244 38.5
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.8e-47 192.6 244 38.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 7.7e-40 168.3 145 55.9
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.7e-39 167.2 97 80.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.9e-38 163.7 104 74.0
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.4e-33 147.5 97 74.2
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.4e-33 147.5 97 74.2
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.4e-33 146.7 88 76.1
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 4.1e-33 146.0 93 69.9
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 4.2e-30 136.0 108 58.3
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 4.9e-26 122.5 74 73.0
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 1.8e-25 120.6 117 52.1
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.0e-20 104.8 66 78.8
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.2e-11 74.7 44 77.3
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.4e-09 67.0 51 51.0


User provided reference genes

Program Settings