Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0264 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.3e-61 239.6 126 100.0
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.1e-20 103.6 152 48.7
Gorai.009G095400 Gossypium raimondii HOM05D001463 ORTHO05D001282 5.6e-12 74.7 146 46.6
Gohir.A05G092000 Gossypium hirsutum HOM05D001463 ORTHO05D001282 2.8e-11 72.4 147 42.9
Gohir.D05G092800 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.9e-10 67.8 143 45.5
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 1.5e-09 66.6 158 38.0
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 1.5e-09 66.6 150 42.7
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 4.5e-09 65.1 159 40.3
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 4.5e-09 65.1 166 38.6
CSS0044115 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 5.8e-09 64.7 167 37.7
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 5.8e-09 64.7 158 39.9
CSS0002888 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 7.6e-09 64.3 165 38.2
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 7.6e-09 64.3 158 38.0
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 2.9e-08 62.4 158 39.9
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.9e-08 62.4 150 40.7
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 4.9e-08 61.6 163 37.4
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 4.9e-08 61.6 159 36.5
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 4.9e-08 61.6 143 40.6
MD11G1091200 Malus domestica HOM05D001463 ORTHO05D001282 6.4e-08 61.2 156 34.0
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 6.4e-08 61.2 157 39.5
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 8.4e-08 60.8 160 39.4
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 1.1e-07 60.5 151 39.1
Nn2g13529 Nelumbo nucifera HOM05D001463 ORTHO05D001282 1.4e-07 60.1 149 41.6
Psat0s558g0040 Pisum sativum HOM05D001463 ORTHO05D001282 1.4e-07 60.1 155 40.6
AT5G02020 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 1.9e-07 59.7 148 37.8
Eucgr.B02296 Eucalyptus grandis HOM05D001463 ORTHO05D001282 2.4e-07 59.3 157 35.7
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.4e-07 59.3 157 36.3
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 2.4e-07 59.3 155 38.1
Sp6g20900 Schrenkiella parvula HOM05D001463 ORTHO05D001282 2.4e-07 59.3 132 34.8
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 3.2e-07 58.9 151 38.4
COL.COLO4_18603 Corchorus olitorius HOM05D001463 ORTHO05D001282 4.2e-07 58.5 156 39.1
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 7.1e-07 57.8 156 37.2
Duzib150G0778 Durio zibethinus HOM05D001463 ORTHO05D001282 7.1e-07 57.8 157 38.9
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 9.3e-07 57.4 158 36.7
MSTRG.5625 Avicennia marina HOM05D001463 ORTHO05D001282 1.2e-06 57.0 154 36.4
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 1.2e-06 57.0 156 35.9
TWI31G0608 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 1.2e-06 57.0 154 37.7
BcaB01g06206 Brassica carinata HOM05D001956 ORTHO05D002035 1.6e-06 56.6 142 38.7
Carub.0008s1987 Capsella rubella HOM05D001463 ORTHO05D001282 1.6e-06 56.6 129 41.1
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 1.6e-06 56.6 160 35.6
CARHR211340 Cardamine hirsuta HOM05D001463 ORTHO05D001282 2.1e-06 56.2 147 37.4
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 2.1e-06 56.2 164 38.4
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 2.7e-06 55.8 160 37.5
THA.LOC104827030 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 2.7e-06 55.8 163 35.0
A10p16390 Brassica napus HOM05D001463 ORTHO05D001282 3.5e-06 55.5 136 36.0
BraA10t43726Z Brassica rapa HOM05D001463 ORTHO05D001282 3.5e-06 55.5 136 36.0
CARHR285550 Cardamine hirsuta HOM05D001463 ORTHO05D001282 3.5e-06 55.5 130 36.9
Solyc09g011470.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 3.5e-06 55.5 157 38.2
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 3.5e-06 55.5 143 37.8
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 6.0e-06 54.7 160 37.5
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 7.9e-06 54.3 159 35.2


User provided reference genes

Program Settings