Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.9e-311 1071.6 558 100.0
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 8.2e-156 554.7 583 57.1
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 8.0e-135 485.0 551 51.7
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 5.2e-134 482.3 546 52.2
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 5.5e-128 462.2 547 51.4
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 9.8e-125 451.4 564 49.1
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.7e-124 449.5 577 48.4
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 3.5e-122 443.0 546 50.2
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 7.8e-122 441.8 550 48.5
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 4.7e-119 432.6 543 47.7
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 2.2e-116 423.7 546 48.9
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.6e-114 417.5 564 47.5
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 8.6e-113 411.8 543 47.1
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 4.3e-112 409.5 562 44.8
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.6e-111 407.5 556 46.4
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.1e-111 407.1 569 44.8
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.1e-110 404.8 548 45.4
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 5.2e-110 402.5 546 46.3
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 4.9e-108 396.0 570 45.6
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.4e-107 393.7 554 44.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 2.1e-106 390.6 546 45.1
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.1e-106 390.6 553 45.2
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 6.0e-106 389.0 587 44.3
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.0e-105 386.7 566 44.2
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.5e-104 384.4 554 44.9
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 1.9e-104 384.0 551 44.8
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.5e-104 383.6 556 44.1
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 9.5e-104 381.7 563 44.4
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 3.6e-103 379.8 552 44.7
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.1e-102 376.7 576 43.4
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.6e-101 372.1 580 41.7
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 2.2e-100 370.5 538 45.9
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.9e-100 369.4 568 42.4
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 5.4e-99 365.9 559 43.3
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 2.1e-98 364.0 549 42.3
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.1e-98 364.0 586 41.3
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 4.6e-98 362.8 546 43.6
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 5.6e-96 355.9 544 43.0
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 1.2e-95 354.8 564 43.4
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 1.6e-95 354.4 561 42.6
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 1.6e-95 354.4 563 41.4
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.6e-95 354.4 547 41.9
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 1.4e-94 351.3 545 43.3
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.8e-94 350.9 655 39.2
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 8.9e-94 348.6 655 39.5
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 4.9e-92 342.8 559 41.1
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 3.2e-91 340.1 544 41.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.6e-90 337.8 559 42.4
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 3.5e-90 336.7 559 42.2
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 7.8e-90 335.5 498 42.4
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 2.3e-89 334.0 509 44.0
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 3.3e-88 330.1 286 60.1
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 7.3e-88 328.9 552 40.9
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.6e-87 326.6 566 39.9
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 4.0e-86 323.2 542 40.0
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 1.7e-84 317.8 558 40.9
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.1e-83 315.1 543 40.9
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 8.7e-81 305.4 483 40.8
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.5e-80 304.7 585 37.3
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 4.3e-80 303.1 570 37.9
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 7.3e-80 302.4 509 39.9
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.3e-79 301.6 565 38.8
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 2.4e-78 297.4 544 38.4
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 4.0e-78 296.6 554 38.8
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 5.8e-77 292.7 562 39.5
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.9e-75 287.7 588 37.6
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.9e-75 287.7 548 38.5
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 2.4e-75 287.3 546 36.4
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 7.1e-75 285.8 571 36.4
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 9.3e-75 285.4 572 35.7
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 2.1e-74 284.3 586 36.0
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.0e-73 282.0 563 37.1
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 5.1e-73 279.6 588 35.4
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 2.5e-72 277.3 561 36.9
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 9.6e-72 275.4 561 37.1
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.3e-71 275.0 551 36.8
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 3.7e-71 273.5 604 35.3
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 1.2e-69 268.5 564 36.5
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.9e-68 263.8 484 38.6
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.4e-67 261.5 573 35.8
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.5e-64 251.5 482 38.4
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.3e-64 250.4 581 34.8
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.3e-63 248.4 581 34.8
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 8.2e-63 245.7 567 36.3
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 9.0e-62 242.3 574 33.6
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 4.5e-61 240.0 565 37.7
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 5.9e-61 239.6 564 34.6
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 5.9e-61 239.6 564 34.6
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.0e-60 238.8 580 32.6
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.3e-60 238.4 566 36.2
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 1.3e-60 238.4 559 34.0
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 2.9e-60 237.3 497 36.0
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 7.2e-59 232.6 562 33.6
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.3e-57 228.4 556 34.9
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 5.7e-56 223.0 553 34.4
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 3.7e-55 220.3 567 32.8
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 5.9e-53 213.0 619 31.0
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.3e-52 211.8 564 33.0
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 2.2e-52 211.1 565 32.6
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.2e-52 211.1 542 33.2
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 3.8e-52 210.3 552 33.0
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 3.6e-50 203.8 362 39.8
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 4.3e-48 196.8 500 34.0
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 6.9e-46 189.5 375 39.7
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.0e-44 185.7 158 57.6
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 4.2e-43 180.3 413 33.7
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.7e-36 158.3 379 34.3
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.2e-19 100.9 161 39.8
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 4.7e-18 97.1 212 36.3
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 5.0e-12 77.0 499 22.4
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.9e-11 75.1 430 24.0
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.9e-11 75.1 430 24.0
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 2.4e-06 58.2 183 29.0
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 7.0e-06 56.6 60 51.7
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 7.0e-06 56.6 246 27.6


User provided reference genes

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