Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 0.0e+00 1287.3 647 100.0
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 3.1e-255 885.2 596 77.0
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 1.4e-239 833.2 646 68.4
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 3.2e-236 822.0 649 68.3
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 2.6e-230 802.4 644 66.0
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 3.5e-227 792.0 648 66.4
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 1.4e-223 780.0 649 64.3
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 3.1e-223 778.9 646 65.0
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 7.7e-222 774.2 644 63.4
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 3.8e-221 771.9 656 64.5
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 6.5e-221 771.2 647 63.8
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 7.9e-219 764.2 644 63.5
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.0e-218 763.8 646 63.0
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 1.8e-218 763.1 634 63.6
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 2.3e-218 762.7 686 60.2
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 3.0e-218 762.3 583 70.7
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 5.7e-217 758.1 645 63.4
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.3e-216 756.9 654 63.3
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 1.7e-216 756.5 646 62.5
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 1.4e-215 753.4 647 63.4
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 9.1e-215 750.7 649 63.5
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 5.0e-213 745.0 650 62.3
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 2.1e-211 739.6 640 62.8
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 1.0e-210 737.3 647 61.7
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 1.4e-210 736.9 647 62.4
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 3.7e-208 728.8 627 62.4
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 1.8e-207 726.5 656 61.1
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 3.1e-207 725.7 648 60.8
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 3.1e-207 725.7 638 62.1
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 2.0e-206 723.0 635 59.7
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 3.4e-206 722.2 637 60.9
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 2.5e-204 716.1 645 60.3
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 2.1e-203 713.0 654 58.9
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 1.0e-202 710.7 645 60.5
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 1.8e-202 709.9 656 60.4
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 4.4e-201 705.3 645 59.2
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.7e-200 703.4 637 58.1
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 2.2e-200 703.0 640 61.2
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 3.1e-199 699.1 648 59.3
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 9.1e-199 697.6 651 58.4
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 1.6e-198 696.8 648 58.8
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 2.6e-198 696.0 637 60.1
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 5.9e-198 694.9 503 73.2
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 1.7e-197 693.3 639 59.3
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 6.5e-197 691.4 697 56.0
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.1e-196 690.6 652 58.0
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 2.1e-195 686.4 631 59.9
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 8.8e-194 681.0 643 58.0
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 8.8e-194 681.0 638 58.5
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 1.3e-192 677.2 651 57.1
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.1e-191 672.2 614 60.6
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 4.5e-190 668.7 651 58.8
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 7.7e-190 667.9 630 58.1
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 8.5e-189 664.5 651 56.2
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 1.1e-188 664.1 664 57.1
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 1.9e-188 663.3 659 57.2
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 3.2e-188 662.5 627 57.4
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 9.4e-188 661.0 584 63.0
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 3.6e-187 659.1 649 55.3
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 8.0e-187 657.9 651 57.5
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 1.2e-185 654.1 631 57.8
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 3.4e-185 652.5 627 56.9
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 7.5e-185 651.4 652 56.0
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.7e-184 650.2 662 56.0
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 2.8e-184 649.4 661 56.0
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 1.2e-182 644.0 665 57.1
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 5.9e-182 641.7 651 56.4
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 7.7e-182 641.3 653 54.5
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 2.9e-181 639.4 646 56.2
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 6.6e-181 638.3 663 55.2
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 7.2e-180 634.8 645 56.1
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 1.2e-179 634.0 628 56.2
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 8.0e-179 631.3 648 53.4
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 1.3e-176 624.0 624 57.2
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 8.3e-176 621.3 648 54.3
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 1.4e-175 620.5 650 53.1
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.2e-174 617.5 636 53.9
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 2.0e-174 616.7 595 57.8
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 5.9e-174 615.1 567 57.3
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 2.3e-173 613.2 634 53.8
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 6.6e-173 611.7 614 56.7
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 1.9e-172 610.1 507 62.7
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 4.7e-171 605.5 651 53.3
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 6.1e-171 605.1 559 59.4
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.0e-170 604.4 649 52.1
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 2.3e-170 603.2 642 52.3
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 5.2e-170 602.1 589 57.0
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 8.9e-170 601.3 717 50.2
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 1.2e-169 600.9 651 53.0
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 5.8e-169 598.6 648 53.2
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 1.3e-168 597.4 523 61.8
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 8.3e-168 594.7 664 52.1
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 7.0e-167 591.7 653 52.4
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.7e-165 587.0 637 52.7
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 8.6e-165 584.7 649 51.8
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 1.1e-164 584.3 571 56.0
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.5e-164 583.9 647 51.3
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 8.9e-162 574.7 646 50.2
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.5e-161 573.9 651 50.7
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 3.4e-161 572.8 654 49.8
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 5.8e-161 572.0 606 52.6
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.7e-160 570.5 565 55.6
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 1.1e-159 567.8 653 51.0
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.6e-158 563.9 593 53.5
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 4.6e-158 562.4 653 50.4
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 4.6e-158 562.4 500 60.0
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 7.8e-158 561.6 684 48.8
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 1.3e-157 560.8 650 49.2
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 1.3e-157 560.8 650 49.2
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 3.9e-157 559.3 650 49.1
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.1e-156 557.8 649 50.5
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.5e-156 557.4 646 49.1
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 2.5e-156 556.6 645 49.1
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 2.5e-156 556.6 645 49.1
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 1.2e-155 554.3 647 49.9
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.7e-152 543.9 614 51.3
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 4.1e-151 539.3 538 55.0
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.2e-150 537.7 624 50.5
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 2.1e-150 537.0 533 55.9
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 2.7e-150 536.6 652 49.4
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.7e-149 533.9 701 47.5
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 7.3e-148 528.5 502 57.6
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 9.5e-148 528.1 592 51.5
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 1.2e-147 527.7 537 55.3
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.3e-128 464.5 647 46.8
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.2e-128 463.8 421 58.4
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 5.1e-125 452.6 630 46.7
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 5.3e-122 442.6 502 50.8
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 5.3e-122 442.6 495 50.5
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 5.3e-122 442.6 495 50.5
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 8.4e-120 435.3 626 42.0
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 2.1e-118 430.6 482 50.6
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 1.8e-117 427.6 554 46.6
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 2.5e-116 423.7 628 43.0
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 5.3e-106 389.4 388 53.6
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 3.8e-104 383.3 518 44.6
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 1.3e-99 368.2 528 43.9
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 3.4e-76 290.4 562 35.4
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 1.6e-65 255.0 514 33.7
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 3.2e-58 230.7 352 41.8
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 3.9e-56 223.8 308 46.8
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 3.2e-50 204.1 174 57.5
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 3.5e-49 200.7 195 50.3
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 9.8e-44 182.6 129 69.8
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.9e-26 125.2 213 34.7
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 1.2e-20 105.9 155 49.7
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 1.1e-18 99.4 64 71.9
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 7.9e-17 93.2 127 46.5
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-07 61.6 39 71.8
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 3.7e-06 57.8 72 44.4


User provided reference genes

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