Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0147 Trochodendron aralioides HOM05D000314 ORTHO05D050181 4.9e-88 327.8 167 100.0
TAR633G0064 Trochodendron aralioides HOM05D000314 ORTHO05D000189 1.0e-37 160.6 156 58.3
TAR633G2343 Trochodendron aralioides HOM05D000314 ORTHO05D000189 1.0e-37 160.6 156 58.3
CSS0032078 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 6.3e-27 124.8 157 47.8
Cfa016616 Carpinus fangiana HOM05D000314 ORTHO05D000189 6.9e-26 121.3 147 52.4
Haze_19620 Corylus avellana HOM05D000314 ORTHO05D000189 9.1e-26 120.9 156 50.6
TWI74G0408 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 7.7e-25 117.9 146 47.9
MBI17_g08337_MAGBIO Magnolia biondii HOM05D000314 ORTHO05D000189 3.8e-24 115.5 151 49.7
MSTRG.19267 Avicennia marina HOM05D000314 ORTHO05D000189 5.0e-24 115.2 168 44.0
Nitab4.5_0000692g0030 Nicotiana tabacum HOM05D000314 ORTHO05D000189 5.0e-24 115.2 144 49.3
Cpa.g.sc5.11 Carica papaya HOM05D000314 ORTHO05D000189 8.5e-24 114.4 148 46.6
Potri.006G212700 Populus trichocarpa HOM05D000314 ORTHO05D000189 1.1e-23 114.0 148 48.0
Aqoxy2G01155 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 2.5e-23 112.8 126 56.3
CiPaw.09G015000 Carya illinoinensis HOM05D000314 ORTHO05D000189 4.2e-23 112.1 158 48.7
Actinidia05422 Actinidia chinensis HOM05D000314 ORTHO05D000189 5.5e-23 111.7 155 48.4
TWI53G0987 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 5.5e-23 111.7 147 45.6
CiPaw.10G010400 Carya illinoinensis HOM05D000314 ORTHO05D000189 9.4e-23 110.9 160 46.9
Sabra06G0163700 Salix brachista HOM05D000314 ORTHO05D000189 9.4e-23 110.9 148 46.6
PSO339G1370 Papaver somniferum HOM05D000314 ORTHO05D000189 2.1e-22 109.8 147 53.7
Atru.chr8.1493 Acer truncatum HOM05D000314 ORTHO05D000189 2.7e-22 109.4 155 44.5
Cc06_g05900 Coffea canephora HOM05D000314 ORTHO05D000189 2.7e-22 109.4 160 45.6
Prupe.7G109100 Prunus persica HOM05D000314 ORTHO05D000189 4.7e-22 108.6 150 46.7
Lj3E997T0 Lonicera japonica HOM05D000314 ORTHO05D000189 8.0e-22 107.8 155 44.5
Duzib128G0020 Durio zibethinus HOM05D000314 ORTHO05D000189 1.4e-21 107.1 141 47.5
MD12G1024900 Malus domestica HOM05D000314 ORTHO05D000189 5.2e-21 105.1 146 46.6
PGSC0003DMG400008952 Solanum tuberosum HOM05D000314 ORTHO05D000189 8.8e-21 104.4 167 40.7
Duzib093G1236 Durio zibethinus HOM05D000314 ORTHO05D000189 1.1e-20 104.0 141 46.8
Thecc.05G090200 Theobroma cacao HOM05D000314 ORTHO05D000189 4.4e-20 102.1 141 46.8
Peaxi162Scf00404g00032 Petunia axillaris HOM05D000314 ORTHO05D000189 9.7e-20 100.9 159 44.7
Sopen09g004620 Solanum pennellii HOM05D000314 ORTHO05D000189 1.3e-19 100.5 142 43.7
Ciclev10011852m.g Citrus clementina HOM05D000314 ORTHO05D000189 2.2e-19 99.8 150 41.3
Sabra16G0087400 Salix brachista HOM05D000314 ORTHO05D000189 2.2e-19 99.8 149 43.0
VMungo1383G2916 Vigna mungo HOM05D000314 ORTHO05D000189 3.7e-19 99.0 168 39.9
Sabra16G0085300 Salix brachista HOM05D000314 ORTHO05D000189 4.8e-19 98.6 149 42.3
Solyc09g009860.1 Solanum lycopersicum HOM05D000314 ORTHO05D000189 6.3e-19 98.2 142 43.0
PSO384G4047 Papaver somniferum HOM05D000314 ORTHO05D050181 1.1e-18 97.4 135 52.6
RcHm_v2.0_Chr3g0473861 Rosa chinensis HOM05D000314 ORTHO05D000189 1.4e-18 97.1 143 44.1
Dinv31693 Davidia involucrata HOM05D000314 ORTHO05D000189 5.3e-18 95.1 149 41.6
Lj1g0027577 Lotus japonicus HOM05D000314 ORTHO05D000189 5.3e-18 95.1 155 41.9
MD14G1023700 Malus domestica HOM05D000314 ORTHO05D000189 9.1e-18 94.4 146 45.2
Manes.08G026000 Manihot esculenta HOM05D000314 ORTHO05D000189 9.1e-18 94.4 150 42.0
MELO3C009478.2 Cucumis melo HOM05D000314 ORTHO05D000189 2.6e-17 92.8 149 39.6
TPR.G23350 Trifolium pratense HOM05D000314 ORTHO05D000189 2.6e-17 92.8 147 42.2
ClCG10G018910 Citrullus lanatus HOM05D000314 ORTHO05D000189 4.5e-17 92.0 149 39.6
COL.COLO4_29722 Corchorus olitorius HOM05D000314 ORTHO05D000189 4.5e-17 92.0 142 45.1
Sed0022058 Sechium edule HOM05D000314 ORTHO05D000189 4.5e-17 92.0 149 40.3
Manes.09G054700 Manihot esculenta HOM05D000314 ORTHO05D000189 5.9e-17 91.7 145 40.7
Phvul.001G190600 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 5.9e-17 91.7 168 38.7
CANSAT25G1810 Cannabis sativa HOM05D000314 ORTHO05D000189 1.0e-16 90.9 160 40.0
CsaV3_3G037340 Cucumis sativus L. HOM05D000314 ORTHO05D000189 1.7e-16 90.1 149 38.9
Glyma.03G196400 Glycine max HOM05D000314 ORTHO05D000189 2.9e-16 89.4 150 42.0
Sc02g0000290 Simmondsia chinensis HOM05D000314 ORTHO05D000189 2.9e-16 89.4 158 41.8
Glyma.19G194950 Glycine max HOM05D000314 ORTHO05D000189 5.0e-16 88.6 154 42.2
FAN02G0355 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.5e-15 87.0 153 38.6
QL07p038690 Quercus lobata HOM05D000314 ORTHO05D000189 1.5e-15 87.0 143 45.5
SGA_v2.0_scaffold31G12909 Striga asiatica HOM05D000314 ORTHO05D000189 1.5e-15 87.0 153 38.6
FAN09G1809 Fragaria x ananassa HOM05D000314 ORTHO05D000189 2.5e-15 86.3 153 37.9
Eucgr.A02658 Eucalyptus grandis HOM05D000314 ORTHO05D000189 4.2e-15 85.5 123 43.1
Potri.016G079400 Populus trichocarpa HOM05D000314 ORTHO05D000189 7.2e-15 84.7 149 40.3
FvH4_6g18880 Fragaria vesca HOM05D000314 ORTHO05D000189 9.4e-15 84.3 153 37.3
FAN05G1456 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.2e-14 84.0 153 37.9
FAN14G2392 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.2e-14 84.0 153 37.3
QL07p038905 Quercus lobata HOM05D000314 ORTHO05D000189 1.6e-14 83.6 143 44.8
GSVIVG01033855001 Vitis vinifera HOM05D000314 ORTHO05D000189 1.6e-14 83.6 143 39.9
Ca_09010_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 8.0e-14 81.3 148 39.2
Medtr7g104720 Medicago truncatula HOM05D000314 ORTHO05D000189 1.4e-13 80.5 151 40.4
CAN.G397.55 Capsicum annuum HOM05D000314 ORTHO05D000189 4.0e-13 79.0 160 38.8
Gorai.006G154900 Gossypium raimondii HOM05D000314 ORTHO05D000189 1.3e-11 73.9 143 40.6
Gohir.A09G139600 Gossypium hirsutum HOM05D000314 ORTHO05D000189 1.7e-11 73.6 140 41.4
Lalb_Chr01g0018121 Lupinus albus HOM05D000314 ORTHO05D000189 1.7e-11 73.6 148 37.2
Psat3g032680 Pisum sativum HOM05D000314 ORTHO05D000189 1.7e-11 73.6 150 39.3
Lalb_Chr20g0111691 Lupinus albus HOM05D000314 ORTHO05D000189 2.2e-11 73.2 155 39.4
THA.LOC104816393 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 6.3e-11 71.6 154 35.7
THA.LOC104826942 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 1.1e-10 70.9 154 35.7
ATR0776G064 Amborella trichopoda HOM05D000314 ORTHO05D000189 2.4e-10 69.7 111 43.2
Aqoxy4G02767 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 4.1e-10 68.9 152 37.5
CDE12G0132 Ceratophyllum demersum HOM05D000314 ORTHO05D000189 4.1e-10 68.9 116 42.2
Gohir.D09G135000 Gossypium hirsutum HOM05D000314 ORTHO05D000189 4.1e-10 68.9 143 39.2
Migut.J01027 Erythranthe guttata HOM05D000314 ORTHO05D000189 9.1e-10 67.8 125 41.6
PGR004G2051 Punica granatum HOM05D000314 ORTHO05D000189 1.2e-09 67.4 151 39.1
Oeu017683.1 Olea europaea HOM05D000314 ORTHO05D000189 2.0e-09 66.6 165 33.3
Os04g0412800 Oryza sativa ssp. japonica HOM05D000314 ORTHO05D000189 1.0e-08 64.3 144 38.9
HPP92_011903 Vanilla planifolia HOM05D000314 ORTHO05D000189 1.7e-08 63.5 105 45.7
CARHR209390 Cardamine hirsuta HOM05D000314 ORTHO05D000189 6.5e-08 61.6 113 37.2
EL10Ac7g16908 Beta vulgaris HOM05D000314 ORTHO05D000189 8.5e-08 61.2 132 40.2
Zm00001eb083820 Zea mays HOM05D000314 ORTHO05D000189 1.1e-07 60.8 175 33.1
arahy.Tifrunner.gnm1.ann1.C0RV52 Arachis hypogaea HOM05D000314 ORTHO05D000189 2.5e-07 59.7 152 35.5
AT5G03870 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 1.2e-06 57.4 111 36.9
Thhalv10013788m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 1.2e-06 57.4 111 39.6
arahy.Tifrunner.gnm1.ann1.45A2QZ Arachis hypogaea HOM05D000314 ORTHO05D000189 1.6e-06 57.0 153 35.3
unitig_22.g5128 Utricularia gibba HOM05D000314 ORTHO05D000189 2.7e-06 56.2 166 32.5
CDE08G0204 Ceratophyllum demersum HOM05D000314 ORTHO05D000189 6.1e-06 55.1 174 29.3
Ah.04g155100 Amaranthus hybridus HOM05D000314 ORTHO05D000189 8.0e-06 54.7 162 35.8


User provided reference genes

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