Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 8.3e-87 323.6 150 100.0
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 4.9e-47 191.4 142 67.6
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 2.7e-29 132.5 137 51.8
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 4.3e-19 98.6 133 41.4
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 2.2e-18 96.3 133 39.1
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 3.4e-16 89.0 133 36.8
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 4.5e-16 88.6 134 41.8
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 5.9e-16 88.2 136 40.4
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 1.0e-15 87.4 134 37.3
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 1.3e-15 87.0 133 40.6
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 1.7e-15 86.7 133 39.8
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 1.9e-14 83.2 135 34.8
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 2.5e-14 82.8 134 36.6
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 2.5e-14 82.8 134 36.6
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 2.5e-14 82.8 133 36.8
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 3.2e-14 82.4 137 35.0
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 4.2e-14 82.0 133 36.8
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 4.2e-14 82.0 134 34.3
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 5.5e-14 81.6 134 35.8
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 7.2e-14 81.3 134 35.8
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 7.2e-14 81.3 138 34.1
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.2e-13 80.5 133 37.6
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 1.2e-13 80.5 133 38.3
MBI13_g09214_MAGBIO Magnolia biondii HOM05D007266 ORTHO05D005982 1.6e-13 80.1 146 35.6
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.1e-13 79.7 133 33.8
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.6e-13 79.0 133 36.8
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 6.1e-13 78.2 143 34.3
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 6.1e-13 78.2 133 39.1
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 6.1e-13 78.2 133 39.8
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 1.0e-12 77.4 136 31.6
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 1.4e-12 77.0 133 30.1
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 1.8e-12 76.6 133 38.3
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 1.8e-12 76.6 133 38.3
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.8e-12 76.6 133 35.3
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 3.0e-12 75.9 137 32.8
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 3.0e-12 75.9 133 39.1
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 6.7e-12 74.7 133 36.8
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.1e-11 73.9 133 36.1
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 1.1e-11 73.9 133 35.3
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 1.5e-11 73.6 133 36.1
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 1.5e-11 73.6 135 35.6
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.5e-11 73.6 133 36.8
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.9e-11 73.2 133 36.8
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 2.5e-11 72.8 134 32.8
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 3.3e-11 72.4 134 33.6
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 7.4e-11 71.2 133 36.8
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 1.7e-10 70.1 133 33.1
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 2.8e-10 69.3 133 34.6
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 6.3e-10 68.2 138 32.6
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 3.1e-09 65.9 134 35.1
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 3.1e-09 65.9 136 36.0
Sc11g0006320 Simmondsia chinensis HOM05D007266 ORTHO05D005982 1.2e-08 63.9 141 31.2
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 4.5e-08 62.0 136 30.9
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 4.5e-08 62.0 133 32.3
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 1.3e-07 60.5 137 32.8
Actinidia01518 Actinidia chinensis HOM05D007266 ORTHO05D005982 1.3e-07 60.5 87 35.6
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 2.2e-07 59.7 133 30.8
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 2.9e-07 59.3 84 38.1
Aqoxy1G00397_Aqoxy1G00398 Aquilegia oxysepala HOM05D007266 ORTHO05D005982 2.5e-06 56.2 145 33.8
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 2.5e-06 56.2 133 31.6
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 3.2e-06 55.8 136 31.6


User provided reference genes

Program Settings