Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.7e-275 952.2 526 100.0
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 2.1e-137 493.4 539 55.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-130 471.1 529 55.4
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 8.9e-120 434.9 536 54.5
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.9e-118 429.9 532 52.3
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.1e-113 413.7 533 52.2
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.9e-108 395.2 531 50.7
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.5e-106 390.2 521 50.9
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 6.2e-105 385.6 530 49.6
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 3.2e-101 373.2 542 47.4
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.2e-100 371.3 531 54.4
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 1.5e-98 364.4 447 56.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.4e-96 357.1 540 47.8
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.3e-96 355.9 519 47.0
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.4e-94 348.6 518 48.3
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.3e-91 341.3 540 46.3
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.6e-89 334.3 478 48.5
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 1.1e-85 321.6 531 46.0
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.1e-85 321.6 474 48.5
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.0e-83 313.5 534 46.8
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 5.1e-83 312.8 495 47.3
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.7e-82 309.3 527 44.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 9.7e-82 308.5 555 44.3
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.6e-81 307.8 526 46.8
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 3.1e-80 303.5 513 44.8
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-79 301.6 524 43.5
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 5.9e-79 299.3 553 43.4
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 7.7e-79 298.9 542 43.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.9e-78 297.0 541 42.7
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.9e-78 297.0 525 43.6
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.9e-77 294.3 534 45.5
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.6e-76 291.2 520 44.0
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 5.1e-75 286.2 308 54.5
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 8.8e-75 285.4 522 42.5
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 8.8e-75 285.4 522 42.5
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.1e-74 285.0 526 42.2
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.3e-74 283.5 520 42.3
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 9.1e-72 275.4 541 40.9
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.4e-71 273.5 535 42.1
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.0e-70 271.9 475 46.3
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 2.2e-70 270.8 526 40.3
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 3.8e-70 270.0 481 43.9
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.1e-69 268.5 529 42.0
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 5.5e-69 266.2 525 42.1
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 5.5e-69 266.2 479 45.1
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 5.5e-69 266.2 482 45.2
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.2e-68 265.0 519 43.0
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.6e-68 263.5 479 44.3
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 3.0e-67 260.4 474 42.8
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 3.0e-67 260.4 549 40.1
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.0e-66 257.7 532 39.7
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.7e-65 253.4 535 44.5
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.4e-64 250.8 428 44.4
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 7.0e-64 249.2 421 47.3
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 3.5e-63 246.9 483 39.5
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 4.5e-63 246.5 543 39.6
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 5.9e-63 246.1 530 40.4
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.2e-62 244.2 528 41.7
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 3.8e-62 243.4 547 38.6
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 6.5e-62 242.7 536 42.9
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 8.5e-62 242.3 468 40.6
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.6e-60 238.0 531 39.7
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 6.1e-60 236.1 479 44.3
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.0e-59 235.3 482 40.2
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.0e-59 235.3 481 39.7
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 2.6e-58 230.7 529 38.9
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 7.0e-56 222.6 490 39.0
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 2.0e-55 221.1 493 40.4
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.1e-53 215.3 670 35.5
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.5e-53 214.2 527 37.4
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 2.1e-52 211.1 481 37.6
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 3.0e-51 207.2 543 36.8
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 8.8e-51 205.7 555 35.0
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.5e-50 204.9 352 42.6
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 6.3e-49 199.5 528 36.7
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.1e-48 198.7 559 39.0
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 7.0e-48 196.1 514 36.6
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 7.0e-48 196.1 523 35.9
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.5e-47 193.7 527 35.5
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 5.9e-47 193.0 254 51.6
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 1.7e-46 191.4 585 36.2
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.1e-45 188.7 479 35.5
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.1e-44 184.5 382 41.4
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 2.1e-44 184.5 528 35.0
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 2.1e-44 184.5 476 34.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 2.0e-42 177.9 217 51.6
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.4e-40 171.8 475 33.7
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.8e-40 171.4 530 36.4
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 4.5e-39 166.8 538 33.8
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.5e-39 166.8 365 39.2
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.5e-39 166.8 365 39.2
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 7.7e-39 166.0 355 40.8
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 8.6e-38 162.5 351 39.6
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 3.3e-37 160.6 188 55.9
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 5.6e-37 159.8 480 35.0
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 6.1e-36 156.4 122 66.4
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 3.0e-35 154.1 409 36.7
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.0e-35 154.1 141 64.5
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 5.2e-35 153.3 529 32.7
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 8.9e-35 152.5 337 38.3
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 2.0e-34 151.4 353 38.8
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 3.7e-33 147.1 534 33.3
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 8.3e-33 146.0 133 59.4
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.8e-32 144.8 518 32.8
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 1.3e-30 138.7 529 34.2
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 8.6e-30 136.0 232 44.8
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 9.8e-26 122.5 498 30.3
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 6.6e-22 109.8 113 52.2
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 8.6e-22 109.4 74 77.0
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 9.5e-21 105.9 346 34.4
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 9.5e-21 105.9 77 70.1
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 8.1e-20 102.8 472 30.1
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.1e-19 102.4 177 45.2
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.4e-19 102.1 622 28.0
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.9e-16 91.7 358 31.0
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.9e-16 91.7 358 31.0
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 2.7e-15 87.8 526 29.3
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.3e-14 85.5 63 69.8
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 2.1e-12 78.2 380 31.3
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 9.9e-10 69.3 428 29.2
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.1e-08 65.9 106 40.6
MBI16_g14341_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 7.1e-08 63.2 54 64.8
CDE02G3045 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 4.6e-07 60.5 69 53.6
Dinv25932 Davidia involucrata HOM05D000657 ORTHO05D002092 3.0e-06 57.8 45 68.9


User provided reference genes

Program Settings