Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0068 Trochodendron aralioides HOM05D002414 ORTHO05D002531 1.9e-40 168.7 84 100.0
TAR369G0879 Trochodendron aralioides HOM05D002414 ORTHO05D002531 6.2e-31 137.1 84 78.6
QL08p061332 Quercus lobata HOM05D002414 ORTHO05D002531 1.1e-27 126.3 82 69.5
Actinidia02921 Actinidia chinensis HOM05D002414 ORTHO05D002531 1.7e-25 119.0 79 70.9
Duzib106G1475 Durio zibethinus HOM05D002414 ORTHO05D002531 5.0e-25 117.5 85 65.9
Thecc.10G039300 Theobroma cacao HOM05D002414 ORTHO05D002531 5.0e-25 117.5 85 67.1
Peaxi162Scf00658g00422 Petunia axillaris HOM05D002414 ORTHO05D002531 8.6e-25 116.7 79 68.4
Oeu039015.1 Olea europaea HOM05D002414 ORTHO05D002531 1.5e-24 115.9 79 70.9
Hma1.2p1_0026F.1_g016280 Hydrangea macrophylla HOM05D002414 ORTHO05D002531 1.9e-24 115.5 79 69.6
Nitab4.5_0005829g0010 Nicotiana tabacum HOM05D002414 ORTHO05D002531 1.9e-24 115.5 79 67.1
Nitab4.5_0004074g0010 Nicotiana tabacum HOM05D002414 ORTHO05D002531 2.5e-24 115.2 79 65.8
Potri.010G199500 Populus trichocarpa HOM05D002414 ORTHO05D002531 2.5e-24 115.2 85 64.7
Cc02_g07420 Coffea canephora HOM05D002414 ORTHO05D002531 3.3e-24 114.8 79 70.9
ECA233G4115 Erigeron canadensis HOM05D002414 ORTHO05D002531 3.3e-24 114.8 83 61.4
Manes.10G026300 Manihot esculenta HOM05D002414 ORTHO05D002531 3.3e-24 114.8 85 65.9
CAN.G608.2 Capsicum annuum HOM05D002414 ORTHO05D002531 4.3e-24 114.4 85 64.7
Ciclev10031537m.g Citrus clementina HOM05D002414 ORTHO05D002531 5.6e-24 114.0 85 62.4
Dinv26046 Davidia involucrata HOM05D002414 ORTHO05D002531 5.6e-24 114.0 85 68.2
CiPaw.01G291400 Carya illinoinensis HOM05D002414 ORTHO05D002531 1.2e-23 112.8 78 66.7
Gohir.A10G222401 Gossypium hirsutum HOM05D002414 ORTHO05D002531 1.2e-23 112.8 83 65.1
Gohir.D10G234700 Gossypium hirsutum HOM05D002414 ORTHO05D002531 1.2e-23 112.8 83 65.1
Gorai.011G268300 Gossypium raimondii HOM05D002414 ORTHO05D002531 1.2e-23 112.8 83 65.1
Prupe.2G239800 Prunus persica HOM05D002414 ORTHO05D002531 1.2e-23 112.8 79 67.1
GSVIVG01016481001 Vitis vinifera HOM05D002414 ORTHO05D002531 1.2e-23 112.8 85 65.9
HanXRQChr08g0221161 Helianthus annuus HOM05D002414 ORTHO05D002531 1.6e-23 112.5 83 61.4
Phvul.001G236100 Phaseolus vulgaris HOM05D002414 ORTHO05D002531 1.6e-23 112.5 85 63.5
PGSC0003DMG401023823 Solanum tuberosum HOM05D002414 ORTHO05D002531 1.6e-23 112.5 79 67.1
Aqoxy2G02338 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 2.1e-23 112.1 79 68.4
ClCG07G003590 Citrullus lanatus HOM05D002414 ORTHO05D002531 2.1e-23 112.1 84 56.0
Hma1.2p1_0039F.1_g024510 Hydrangea macrophylla HOM05D002414 ORTHO05D002531 2.1e-23 112.1 79 63.3
Lsat_1_v5_gn_8_14881 Lactuca sativa HOM05D002414 ORTHO05D002531 2.1e-23 112.1 83 60.2
COL.COLO4_25492 Corchorus olitorius HOM05D002414 ORTHO05D002531 2.8e-23 111.7 80 68.8
Nn2g13475 Nelumbo nucifera HOM05D002414 ORTHO05D002531 3.6e-23 111.3 81 69.1
Atru.chr12.362 Acer truncatum HOM05D002414 ORTHO05D002531 4.7e-23 110.9 84 66.7
CANSAT56G0766 Cannabis sativa HOM05D002414 ORTHO05D002531 4.7e-23 110.9 79 64.6
Atru.chr12.379 Acer truncatum HOM05D002414 ORTHO05D002531 6.2e-23 110.5 84 66.7
arahy.Tifrunner.gnm1.ann1.8S2BPT Arachis hypogaea HOM05D002414 ORTHO05D002531 8.1e-23 110.2 85 63.5
Cpa.g.sc19.271 Carica papaya HOM05D002414 ORTHO05D002531 8.1e-23 110.2 85 68.2
arahy.Tifrunner.gnm1.ann1.AGZ93U Arachis hypogaea HOM05D002414 ORTHO05D002531 1.1e-22 109.8 85 62.4
Glyma.18G034900 Glycine max HOM05D002414 ORTHO05D002531 1.1e-22 109.8 85 62.4
MSTRG.27366 Avicennia marina HOM05D002414 ORTHO05D002531 1.4e-22 109.4 85 60.0
Sopen06g017790 Solanum pennellii HOM05D002414 ORTHO05D002531 1.4e-22 109.4 79 65.8
VMungo1383G2026 Vigna mungo HOM05D002414 ORTHO05D002531 1.4e-22 109.4 79 64.6
Oeu017562.1 Olea europaea HOM05D002414 ORTHO05D002531 1.8e-22 109.0 79 64.6
Haze_17118 Corylus avellana HOM05D002414 ORTHO05D002531 3.1e-22 108.2 85 63.5
Glyma.11G222700 Glycine max HOM05D002414 ORTHO05D002531 3.1e-22 108.2 85 61.2
MELO3C023887.2 Cucumis melo HOM05D002414 ORTHO05D002531 5.2e-22 107.5 84 53.6
CsaV3_5G008390 Cucumis sativus L. HOM05D002414 ORTHO05D002531 5.2e-22 107.5 84 54.8
Lj2g0015546 Lotus japonicus HOM05D002414 ORTHO05D002531 5.2e-22 107.5 78 64.1
Lj6g0023303 Lotus japonicus HOM05D002414 ORTHO05D002531 5.2e-22 107.5 78 64.1
Hund13795 Selenicereus undatus HOM05D002414 ORTHO05D002531 6.8e-22 107.1 79 63.3
Cfa001425 Carpinus fangiana HOM05D002414 ORTHO05D002531 8.9e-22 106.7 85 63.5
Duzib114G0503 Durio zibethinus HOM05D002414 ORTHO05D002531 8.9e-22 106.7 79 63.3
PSO017G7355 Papaver somniferum HOM05D002414 ORTHO05D002531 1.2e-21 106.3 78 66.7
SalBow5G5569 Salvia bowleyana HOM05D002414 ORTHO05D002531 1.2e-21 106.3 80 58.8
Lalb_Chr15g0084551 Lupinus albus HOM05D002414 ORTHO05D002531 1.5e-21 105.9 85 60.0
RcHm_v2.0_Chr1g0368321 Rosa chinensis HOM05D002414 ORTHO05D002531 2.0e-21 105.5 79 60.8
TWI63G1558 Tripterygium wilfordii HOM05D002414 ORTHO05D002531 2.0e-21 105.5 79 63.3
Sed0012358 Sechium edule HOM05D002414 ORTHO05D002531 2.6e-21 105.1 84 54.8
Ca_08189_v3 Cicer arietinum L. HOM05D002414 ORTHO05D002531 3.4e-21 104.8 85 60.0
Lalb_Chr18g0053061 Lupinus albus HOM05D002414 ORTHO05D002531 3.4e-21 104.8 79 59.5
Eucgr.G02961 Eucalyptus grandis HOM05D002414 ORTHO05D002531 5.8e-21 104.0 85 57.6
QL08p061261 Quercus lobata HOM05D002414 ORTHO05D002531 9.9e-21 103.2 80 62.5
Psat0s4218g0040 Pisum sativum HOM05D002414 ORTHO05D002531 1.3e-20 102.8 75 62.7
SGA_v2.0_scaffold2G01047 Striga asiatica HOM05D002414 ORTHO05D002531 1.3e-20 102.8 79 60.8
Migut.F00748 Erythranthe guttata HOM05D002414 ORTHO05D002531 1.7e-20 102.4 79 58.2
Lj1C943T2 Lonicera japonica HOM05D002414 ORTHO05D002531 2.2e-20 102.1 85 61.2
THA.LOC104810046 Tarenaya hassleriana HOM05D002414 ORTHO05D002531 2.2e-20 102.1 79 60.8
Aa31LG5G19910 Aethionema arabicum HOM05D002414 ORTHO05D002531 2.9e-20 101.7 79 60.8
Ah.10g037050 Amaranthus hybridus HOM05D002414 ORTHO05D002531 2.9e-20 101.7 79 62.0
QL08p061292 Quercus lobata HOM05D002414 ORTHO05D002531 2.9e-20 101.7 75 66.7
RcHm_v2.0_Chr1g0368311 Rosa chinensis HOM05D002414 ORTHO05D002531 2.9e-20 101.7 79 60.8
BcaB06g29102 Brassica carinata HOM05D002414 ORTHO05D002531 4.9e-20 100.9 79 59.5
BcaC02g07434 Brassica carinata HOM05D002414 ORTHO05D002531 4.9e-20 100.9 79 58.2
C04p67550 Brassica napus HOM05D002414 ORTHO05D002531 4.9e-20 100.9 79 58.2
BolC4t28252H Brassica oleracea HOM05D002414 ORTHO05D002531 4.9e-20 100.9 79 58.2
AUR62040698 Chenopodium quinoa HOM05D002414 ORTHO05D002531 4.9e-20 100.9 83 57.8
AUR62012137 Chenopodium quinoa HOM05D002414 ORTHO05D002531 6.4e-20 100.5 83 56.6
Carub.0004s2180 Capsella rubella HOM05D002414 ORTHO05D002531 8.3e-20 100.1 79 59.5
CARHR134590 Cardamine hirsuta HOM05D002414 ORTHO05D002531 8.3e-20 100.1 79 58.2
PSO513G0123 Papaver somniferum HOM05D002414 ORTHO05D002531 8.3e-20 100.1 78 62.8
QL08p061277 Quercus lobata HOM05D002414 ORTHO05D002531 8.3e-20 100.1 68 69.1
QL08p061313 Quercus lobata HOM05D002414 ORTHO05D002531 8.3e-20 100.1 75 64.0
AT2G39740 Arabidopsis thaliana HOM05D002414 ORTHO05D002531 1.1e-19 99.8 79 58.2
EL10Ac2g04700 Beta vulgaris HOM05D002414 ORTHO05D002531 1.1e-19 99.8 79 58.2
A04p30290 Brassica napus HOM05D002414 ORTHO05D002531 1.1e-19 99.8 79 57.0
BraA04t18478Z Brassica rapa HOM05D002414 ORTHO05D002531 1.1e-19 99.8 79 57.0
AL4G37210 Arabidopsis lyrata HOM05D002414 ORTHO05D002531 1.4e-19 99.4 79 57.0
FAN10G1514 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.4e-19 99.4 75 62.7
FAN10G3047 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.4e-19 99.4 75 62.7
PSO339G0723 Papaver somniferum HOM05D002414 ORTHO05D002531 1.4e-19 99.4 78 62.8
PSO478G1772 Papaver somniferum HOM05D002414 ORTHO05D002531 2.4e-19 98.6 78 62.8
Sc11g0007710 Simmondsia chinensis HOM05D002414 ORTHO05D002531 2.4e-19 98.6 79 60.8
FAN03G1385 Fragaria x ananassa HOM05D002414 ORTHO05D002531 4.1e-19 97.8 75 61.3
PSO339G1200 Papaver somniferum HOM05D002414 ORTHO05D002531 4.1e-19 97.8 76 63.2
Sp4g22010 Schrenkiella parvula HOM05D002414 ORTHO05D002531 4.1e-19 97.8 79 58.2
Medtr3g068215 Medicago truncatula HOM05D002414 ORTHO05D002531 1.2e-18 96.3 75 57.3
Aa31LG5G19900 Aethionema arabicum HOM05D002414 ORTHO05D002531 1.6e-18 95.9 67 64.2
FAN01G0953 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.6e-18 95.9 79 55.7
FAN01G2131 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.6e-18 95.9 79 55.7
FAN06G0979 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.6e-18 95.9 79 55.7
FAN06G1983 Fragaria x ananassa HOM05D002414 ORTHO05D002531 1.6e-18 95.9 79 55.7
FAN01G1411 Fragaria x ananassa HOM05D002414 ORTHO05D002531 2.1e-18 95.5 75 60.0
FAN06G1258 Fragaria x ananassa HOM05D002414 ORTHO05D002531 2.1e-18 95.5 75 60.0
FvH4_7g23070 Fragaria vesca HOM05D002414 ORTHO05D002531 6.0e-18 94.0 79 55.7
Rhsim03G0133800 Rhododendron simsii HOM05D002414 ORTHO05D002531 7.8e-18 93.6 55 74.5
Eucgr.J01229 Eucalyptus grandis HOM05D002414 ORTHO05D002531 1.0e-17 93.2 75 56.0
PGR142G0412 Punica granatum HOM05D002414 ORTHO05D002531 1.0e-17 93.2 84 54.8
Thhalv10016564m.g Eutrema salsugineum HOM05D002414 ORTHO05D002531 1.3e-17 92.8 78 53.8
Sabra10G0153800 Salix brachista HOM05D002414 ORTHO05D002531 3.0e-17 91.7 135 41.5
unitig_0.g1623 Utricularia gibba HOM05D002414 ORTHO05D002531 4.3e-16 87.8 72 56.9
PSO339G5487 Papaver somniferum HOM05D002414 ORTHO05D002531 3.6e-15 84.7 81 58.0
Sed0020180 Sechium edule HOM05D002414 ORTHO05D002531 8.1e-15 83.6 75 52.0
Os01g0846450 Oryza sativa ssp. japonica HOM05D002414 ORTHO05D002531 1.1e-14 83.2 79 49.4
SEGI_11088 Sequoiadendron giganteum HOM05D002414 ORTHO05D002531 5.2e-14 80.9 81 49.4
Zm00001eb148120 Zea mays HOM05D002414 ORTHO05D002531 5.8e-13 77.4 71 47.9
MD01G1139300 Malus domestica HOM05D002414 ORTHO05D002531 7.6e-13 77.0 41 78.0
Os01g0846500 Oryza sativa ssp. japonica HOM05D002414 ORTHO05D002531 7.6e-13 77.0 69 55.1
FAN10G0876 Fragaria x ananassa HOM05D002414 ORTHO05D002531 3.8e-12 74.7 52 61.5
ATR0559G259 Amborella trichopoda HOM05D002414 ORTHO05D002531 6.4e-12 73.9 67 46.3
SalBow5G0406 Salvia bowleyana HOM05D002414 ORTHO05D002531 8.4e-12 73.6 39 71.8
HPP92_027009 Vanilla planifolia HOM05D002414 ORTHO05D002531 8.4e-12 73.6 68 55.9
CDE02G1061 Ceratophyllum demersum HOM05D002414 ORTHO05D002531 1.9e-11 72.4 69 47.8
HPP92_015384 Vanilla planifolia HOM05D002414 ORTHO05D002531 4.1e-11 71.2 68 52.9
Lj8C79T13 Lonicera japonica HOM05D002414 ORTHO05D002531 2.7e-10 68.6 39 64.1
BcaC07g40204 Brassica carinata HOM05D002414 ORTHO05D002531 2.3e-09 65.5 61 52.5
Eucgr.J01227 Eucalyptus grandis HOM05D002414 ORTHO05D002531 3.9e-09 64.7 33 78.8
Pp3c9_24560 Physcomitrium patens HOM05D002414 ORTHO05D002531 8.7e-09 63.5 68 45.6
Pp3c9_24568 Physcomitrium patens HOM05D002414 ORTHO05D002531 8.7e-09 63.5 68 45.6
FAN10G0294 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.9e-08 62.4 38 63.2
AagrBONN_evm.TU.Sc2ySwM_117.2729 Anthoceros agrestis HOM05D002414 ORTHO05D002531 3.3e-08 61.6 73 38.4
Aqoxy1G00847 Aquilegia oxysepala HOM05D002414 ORTHO05D002531 3.3e-08 61.6 74 45.9
CAN.G386.2 Capsicum annuum HOM05D000680 ORTHO05D002531 4.3e-08 61.2 42 66.7
SMO141G0048 Selaginella moellendorffii HOM05D002414 ORTHO05D002531 7.3e-08 60.5 54 42.6
CAN.G171.5 Capsicum annuum HOM05D000680 ORTHO05D000738 2.8e-07 58.5 39 66.7
CAN.G1252.2 Capsicum annuum HOM05D000570 ORTHO05D001174 4.7e-07 57.8 39 64.1


User provided reference genes

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