Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.8e-272 941.4 504 100.0
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.4e-215 753.1 504 80.6
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 6.6e-213 744.2 504 78.6
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 3.3e-212 741.9 501 79.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 4.7e-211 738.0 504 79.0
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 5.2e-210 734.6 501 77.0
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 1.3e-208 729.9 505 78.4
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 4.9e-208 728.0 569 72.8
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 1.1e-207 726.9 500 77.2
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.0e-205 720.3 503 76.1
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 6.6e-205 717.6 504 77.6
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 3.6e-203 711.8 504 76.2
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 3.6e-203 711.8 512 76.0
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 8.1e-203 710.7 505 77.2
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.4e-202 709.9 498 75.9
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 2.4e-202 709.1 504 76.0
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.5e-201 706.4 509 75.4
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 4.4e-201 704.9 504 75.8
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 4.9e-200 701.4 503 74.8
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 2.1e-198 696.0 503 75.3
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 1.7e-197 693.0 496 75.8
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 6.6e-197 691.0 499 74.3
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 5.6e-196 688.0 498 75.3
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 7.3e-196 687.6 494 75.1
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.8e-195 684.9 504 74.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 6.2e-195 684.5 494 74.7
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.8e-194 682.9 498 73.9
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 2.4e-194 682.6 511 73.8
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 1.5e-193 679.9 498 73.7
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 2.0e-193 679.5 498 73.5
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 1.3e-192 676.8 476 77.9
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.7e-192 676.4 516 71.7
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 3.2e-191 672.2 502 73.3
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 7.1e-191 671.0 504 72.2
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 9.3e-191 670.6 504 71.8
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 1.0e-189 667.2 496 72.8
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.3e-189 666.8 507 71.8
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 8.7e-189 664.1 498 71.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 3.3e-188 662.1 496 72.0
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 1.6e-187 659.8 504 71.0
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 4.8e-187 658.3 504 74.2
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 4.8e-187 658.3 502 72.3
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 4.8e-187 658.3 501 70.9
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 2.0e-185 652.9 440 81.1
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 3.4e-185 652.1 501 72.1
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 3.4e-185 652.1 497 71.2
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 3.4e-185 652.1 502 70.3
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 9.9e-185 650.6 501 72.3
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.3e-184 650.2 505 69.9
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 2.9e-184 649.0 505 69.9
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 2.9e-184 649.0 503 71.8
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.9e-183 646.4 489 71.4
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 1.2e-182 643.7 504 70.8
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 6.0e-182 641.3 501 68.7
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.8e-181 639.8 496 69.6
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.5e-180 636.7 498 70.1
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.5e-180 636.7 498 70.3
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 1.5e-180 636.7 507 67.5
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 3.3e-180 635.6 458 76.4
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 4.3e-180 635.2 506 69.2
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 5.6e-180 634.8 525 66.9
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 4.8e-179 631.7 498 69.9
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 8.1e-179 630.9 503 69.4
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 8.1e-179 630.9 505 69.5
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 4.0e-178 628.6 476 73.9
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 2.2e-176 622.9 459 74.9
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.9e-175 619.8 502 68.5
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.0e-173 614.0 508 66.5
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 8.7e-173 610.9 495 68.5
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.4e-172 607.8 552 64.1
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 6.3e-171 604.7 476 69.3
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 9.0e-170 600.9 504 66.7
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 1.1e-167 594.0 412 78.2
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 1.4e-167 593.6 517 63.4
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 6.7e-165 584.7 500 65.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 2.5e-164 582.8 409 78.2
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 9.7e-164 580.9 483 67.9
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.9e-160 569.3 456 69.1
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.0e-160 568.5 453 69.8
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 6.1e-158 561.6 509 63.5
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 4.4e-156 555.4 470 66.2
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.1e-154 550.8 522 60.5
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 3.4e-153 545.8 437 69.6
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 8.5e-152 541.2 475 64.4
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 7.9e-150 534.6 493 62.7
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.6e-134 483.8 380 69.2
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 5.2e-133 478.8 364 73.6
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 4.9e-123 445.7 366 68.3
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 6.8e-109 398.7 501 51.7
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 4.1e-106 389.4 377 57.0
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 1.2e-105 387.9 298 72.5
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.7e-104 384.0 509 47.5
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 3.0e-96 356.7 256 74.6
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 5.6e-95 352.4 289 67.8
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 1.4e-82 311.2 253 69.2
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 4.3e-79 299.7 237 69.2
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 3.2e-74 283.5 255 61.2
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 5.1e-72 276.2 248 66.5
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 2.9e-67 260.4 171 78.9
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 2.1e-62 244.2 154 81.2
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 4.8e-62 243.0 211 64.0
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 2.5e-58 230.7 168 74.4
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 7.4e-55 219.2 156 74.4
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-46 190.7 136 76.5
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 1.7e-43 181.4 144 67.4
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.4e-37 161.8 166 56.6
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 9.4e-34 149.1 95 86.3
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 2.7e-33 147.5 499 29.9
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 1.0e-32 145.6 93 86.0
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-30 138.3 93 82.8
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 6.5e-27 126.3 90 72.2
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 4.4e-23 113.6 72 83.3
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 5.7e-23 113.2 74 83.8
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.8e-22 110.2 77 72.7
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.8e-21 108.2 99 60.6
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 4.1e-21 107.1 64 81.2
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.5e-15 86.3 59 76.3
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 2.2e-14 84.7 57 75.4
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.5e-07 62.0 89 50.6
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 2.8e-06 57.8 42 61.9


User provided reference genes

Program Settings