Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 3.7e-216 754.6 381 100.0
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.2e-174 616.7 382 80.6
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.1e-172 610.1 389 80.2
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.1e-170 603.6 393 78.1
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 5.2e-170 601.3 382 79.1
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 5.2e-170 601.3 382 79.1
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 4.9e-168 594.7 388 77.3
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 4.9e-168 594.7 385 79.2
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.4e-167 593.2 388 79.4
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 9.2e-167 590.5 382 77.5
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 9.2e-167 590.5 381 75.9
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 9.2e-167 590.5 382 77.2
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.2e-166 590.1 388 79.1
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.5e-166 588.6 385 79.7
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 4.6e-166 588.2 381 75.6
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 4.6e-166 588.2 384 77.9
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.7e-165 586.3 381 78.2
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 5.1e-165 584.7 381 78.5
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 6.6e-165 584.3 385 78.4
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.1e-164 583.6 385 78.4
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 6.2e-163 577.8 382 77.2
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 6.2e-163 577.8 382 77.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 2.4e-162 575.9 383 74.7
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 3.1e-162 575.5 383 77.3
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 5.2e-162 574.7 387 75.2
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.6e-161 572.4 382 76.7
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.6e-161 572.4 382 76.7
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 4.4e-161 571.6 383 76.2
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 7.6e-161 570.9 382 76.7
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 9.9e-161 570.5 385 75.1
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.3e-160 570.1 387 75.5
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.1e-159 567.0 381 75.1
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.4e-159 566.6 386 75.4
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 4.2e-159 565.1 385 75.8
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 7.1e-159 564.3 381 74.3
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 7.1e-159 564.3 382 75.4
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.2e-158 563.5 386 74.9
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.2e-158 563.5 385 74.5
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.6e-158 563.1 382 75.9
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.1e-158 562.8 388 72.9
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 2.7e-158 562.4 397 73.3
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 6.6e-157 557.8 393 73.0
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.1e-156 557.0 391 73.4
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.5e-156 555.8 384 73.2
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 3.3e-156 555.4 391 73.1
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 4.3e-156 555.1 400 71.2
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 9.6e-156 553.9 391 71.6
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.2e-155 553.5 382 74.1
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.4e-154 550.1 389 73.5
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 6.9e-154 547.7 388 72.4
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 3.4e-153 545.4 389 73.0
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 3.4e-153 545.4 389 73.0
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.9e-152 542.3 390 70.3
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 4.9e-152 541.6 373 73.7
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.9e-151 539.7 381 73.8
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 3.2e-151 538.9 384 70.8
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 5.4e-151 538.1 367 73.8
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 5.4e-151 538.1 299 85.6
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 1.6e-150 536.6 388 69.6
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.1e-150 536.2 384 73.2
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 3.5e-150 535.4 461 63.6
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 6.0e-150 534.6 367 73.0
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.0e-149 533.9 390 68.5
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.3e-149 533.5 388 69.8
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.0e-149 532.3 381 70.6
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.1e-149 531.6 390 68.2
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 6.6e-149 531.2 385 69.9
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.5e-148 530.0 371 72.0
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.9e-148 529.6 389 68.4
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.9e-148 529.6 390 70.5
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.5e-148 529.3 387 69.8
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.5e-148 529.3 433 65.6
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 4.3e-148 528.5 390 70.3
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.6e-147 525.4 382 70.4
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 4.8e-147 525.0 333 75.7
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 9.9e-145 517.3 382 68.3
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 2.9e-144 515.8 381 69.3
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 6.7e-141 504.6 381 68.0
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.9e-140 503.1 389 66.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 3.3e-140 502.3 495 57.0
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 5.6e-140 501.5 426 63.1
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 5.6e-140 501.5 283 84.8
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.6e-139 500.0 385 68.8
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.7e-139 498.8 330 72.1
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 6.2e-139 498.0 388 67.0
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 6.9e-138 494.6 381 67.5
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.2e-137 493.8 391 66.8
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.2e-137 493.8 389 67.4
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.9e-136 488.4 383 66.1
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-133 479.2 391 65.5
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 5.1e-133 478.4 398 62.8
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.1e-131 473.0 303 78.2
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 6.2e-131 471.5 391 64.2
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 4.0e-130 468.8 296 75.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.5e-129 466.8 304 72.4
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 7.6e-129 464.5 356 69.9
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.0e-125 454.1 381 64.3
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 6.9e-114 414.8 322 69.3
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 5.9e-105 385.2 300 61.7
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.7e-104 383.6 300 61.0
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 2.9e-104 382.9 228 78.9
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 2.7e-102 376.3 331 56.2
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 7.0e-98 361.7 248 71.4
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 2.0e-97 360.1 299 56.2
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 3.5e-97 359.4 213 78.4
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 3.5e-97 359.4 213 78.4
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 3.5e-97 359.4 213 78.4
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 3.0e-93 346.3 233 68.7
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.5e-92 344.0 213 77.0
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.6e-86 322.8 293 59.7
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 4.1e-82 309.3 290 50.0
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.6e-76 290.0 177 78.0
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 2.8e-75 286.6 230 63.0
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 1.2e-73 281.2 291 47.8
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 5.9e-73 278.9 304 45.4
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.0e-65 253.8 157 80.9
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.3e-64 251.1 278 43.9
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.1e-58 229.6 135 80.0
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 6.0e-41 172.6 174 57.5
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 1.9e-39 167.5 161 49.1
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.8e-38 163.7 108 72.2
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 8.4e-35 152.1 108 67.6
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.9e-34 151.0 184 52.2
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 5.6e-31 139.4 97 68.0
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.4e-28 130.2 87 67.8
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 1.6e-22 111.3 64 78.1
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 3.9e-16 90.1 47 83.0
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 3.9e-16 90.1 47 83.0
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.9e-10 71.2 41 82.9
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 2.1e-09 67.8 108 40.7
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 6.3e-06 56.2 43 60.5


User provided reference genes

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