Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0050 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.6e-61 239.2 116 100.0
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 2.5e-14 82.4 112 44.6
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 4.2e-14 81.6 117 46.2
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.2e-11 73.6 83 50.6
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 2.0e-11 72.8 85 54.1
Manes.07G095300 Manihot esculenta HOM05D009695 ORTHO05D007271 4.8e-10 68.2 108 38.9
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 3.1e-09 65.5 83 48.2
CSS0012629 Camellia sinensis var. sinensis HOM05D007861 ORTHO05D007271 2.0e-08 62.8 83 48.2
Sabra10G0174600 Salix brachista HOM05D007861 ORTHO05D007271 7.7e-08 60.8 83 42.2
MBI18_g25264_MAGBIO Magnolia biondii HOM05D022601 ORTHO05D023448 2.3e-07 59.3 84 54.8
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 3.8e-07 58.5 76 44.7
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 1.1e-06 57.0 91 38.5
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 1.1e-06 57.0 90 41.1
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.1e-06 57.0 90 41.1
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.1e-06 57.0 90 42.2
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.1e-06 57.0 90 41.1
CiPaw.01G269700 Carya illinoinensis HOM05D007861 ORTHO05D007271 1.5e-06 56.6 86 46.5
Gohir.D05G294900 Gossypium hirsutum HOM05D009695 ORTHO05D007271 1.5e-06 56.6 84 44.0
TPR.G10289 Trifolium pratense HOM05D007861 ORTHO05D007271 1.5e-06 56.6 74 45.9
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 1.9e-06 56.2 55 49.1
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 1.9e-06 56.2 55 49.1
Medtr1g094250 Medicago truncatula HOM05D007861 ORTHO05D007271 2.5e-06 55.8 75 48.0
Ciclev10033954m.g Citrus clementina HOM05D007861 ORTHO05D007271 3.3e-06 55.5 80 45.0
Gorai.009G311600 Gossypium raimondii HOM05D009695 ORTHO05D007271 3.3e-06 55.5 83 41.0
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 9.5e-06 53.9 84 41.7
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 9.5e-06 53.9 90 41.1
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 9.5e-06 53.9 84 47.6


User provided reference genes

Program Settings