Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.8e-201 705.7 345 100.0
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.0e-156 557.0 347 82.4
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 4.5e-152 541.6 345 77.1
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 8.4e-151 537.3 342 75.7
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.4e-150 536.6 343 76.1
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 7.1e-150 534.3 341 75.1
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 1.3e-146 523.5 342 77.5
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.4e-145 520.0 341 73.9
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 1.8e-145 519.6 342 74.9
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 3.1e-145 518.8 341 73.9
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 4.0e-145 518.5 341 74.2
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 2.0e-144 516.2 342 71.9
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.6e-144 515.8 343 70.6
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 2.6e-144 515.8 343 70.3
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 5.8e-144 514.6 342 72.5
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 9.9e-144 513.8 343 71.7
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.7e-143 513.1 341 73.6
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.7e-143 513.1 349 70.5
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 4.9e-143 511.5 348 69.8
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 1.9e-142 509.6 338 69.5
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 1.2e-141 506.9 347 71.2
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 2.7e-141 505.8 338 69.2
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 2.7e-141 505.8 342 72.5
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 6.0e-141 504.6 340 69.7
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 7.9e-141 504.2 340 69.1
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 1.3e-140 503.4 339 69.0
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.3e-140 503.4 342 71.1
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.8e-140 503.1 343 68.2
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.8e-140 503.1 339 71.4
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 3.0e-140 502.3 338 69.5
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 3.0e-140 502.3 342 69.9
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 5.1e-140 501.5 335 69.6
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 5.1e-140 501.5 341 71.0
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 6.7e-140 501.1 338 69.2
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 8.7e-140 500.7 342 69.6
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 8.7e-140 500.7 341 70.4
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 1.5e-139 500.0 338 69.2
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.9e-139 499.6 345 69.6
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.5e-139 499.2 337 71.8
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.5e-139 499.2 347 70.9
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 4.3e-139 498.4 338 68.3
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 4.3e-139 498.4 347 72.3
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 5.6e-139 498.0 341 67.7
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 5.6e-139 498.0 338 68.9
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 9.6e-139 497.3 348 69.5
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 2.8e-138 495.7 343 70.6
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 2.8e-138 495.7 346 71.1
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 1.1e-137 493.8 346 69.7
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.4e-137 493.4 339 70.2
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.8e-137 493.0 338 71.6
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 3.1e-137 492.3 342 67.5
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 4.0e-137 491.9 338 71.3
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 5.3e-137 491.5 341 68.9
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 5.3e-137 491.5 338 71.0
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.2e-136 490.3 338 71.0
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 2.0e-136 489.6 342 67.5
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 4.5e-136 488.4 348 68.1
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.0e-135 487.3 344 68.3
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.7e-135 486.5 346 69.9
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 8.4e-135 484.2 345 67.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 8.4e-135 484.2 337 69.4
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.9e-134 483.0 344 66.3
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 4.2e-134 481.9 339 67.6
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 1.2e-133 480.3 342 68.1
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.6e-133 479.9 372 64.0
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 7.9e-133 477.6 344 66.3
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.3e-132 476.1 339 67.6
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.5e-131 473.4 344 66.6
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.9e-131 473.0 349 65.9
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 2.5e-131 472.6 345 67.8
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.3e-131 471.9 344 66.3
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 1.6e-130 469.9 345 66.4
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 2.8e-130 469.2 342 67.0
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 3.7e-130 468.8 394 60.4
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 4.8e-130 468.4 344 65.4
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 1.1e-129 467.2 344 66.6
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.4e-129 466.1 339 66.7
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.0e-127 460.7 341 65.1
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.7e-127 459.9 348 64.1
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 5.0e-127 458.4 341 64.2
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.9e-125 451.1 338 66.0
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 1.0e-124 450.7 338 66.3
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.3e-124 449.5 338 66.0
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 3.9e-124 448.7 339 62.5
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.1e-123 447.2 340 64.7
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.5e-123 446.8 347 63.7
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-122 443.7 338 65.7
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 1.6e-122 443.4 352 64.5
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.6e-122 443.4 338 65.4
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 2.8e-122 442.6 385 60.8
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 4.8e-122 441.8 340 63.5
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.1e-121 437.6 338 64.2
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 9.1e-121 437.6 353 59.2
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 5.0e-119 431.8 337 60.8
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.9e-118 429.9 343 62.7
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 2.1e-117 426.4 347 62.5
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 8.8e-116 421.0 340 60.3
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.5e-115 420.2 344 61.6
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 2.2e-114 416.4 343 59.8
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 6.3e-114 414.8 291 70.8
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 8.2e-114 414.5 340 60.0
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 9.1e-113 411.0 342 59.6
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 3.9e-108 395.6 268 70.9
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 2.0e-107 393.3 340 56.8
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 2.6e-107 392.9 436 49.3
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.9e-102 376.7 339 54.6
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 8.5e-95 351.3 258 64.3
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 3.2e-94 349.4 253 65.2
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 3.4e-91 339.3 293 60.4
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.4e-89 334.0 233 66.5
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.5e-83 313.9 186 79.6
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.0e-83 313.5 183 80.3
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 7.3e-78 295.0 340 44.1
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 7.8e-72 275.0 341 39.6
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 2.2e-66 256.9 338 40.2
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.0e-63 245.7 209 61.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.4e-49 200.3 179 59.2
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.5e-48 196.4 204 54.9
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 5.1e-47 192.6 169 65.7
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 4.3e-46 189.5 259 37.8
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 4.0e-44 183.0 190 54.7
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 6.6e-39 165.6 182 53.3
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.3e-38 162.2 213 46.5
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 5.3e-28 129.4 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.1e-20 105.1 135 37.8
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.4e-19 100.1 60 76.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.4e-19 100.1 60 76.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 3.4e-19 100.1 60 76.7
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 2.9e-18 97.1 60 75.0
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.0e-15 88.6 107 39.3
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.1e-14 85.1 53 73.6
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.1e-14 85.1 53 73.6
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.3e-14 83.2 93 53.8
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.3e-13 81.6 76 56.6
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 4.8e-13 79.7 76 55.3
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.8e-12 77.8 76 53.9
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.7e-10 71.2 65 56.9
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.2e-10 70.9 88 43.2
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.1e-09 68.6 60 58.3
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 1.5e-06 58.2 89 36.0


User provided reference genes

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