Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 4.0e-295 1017.3 500 100.0
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 4.2e-236 821.2 474 83.5
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 2.0e-230 802.4 499 77.4
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 1.0e-229 800.0 499 79.2
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 4.1e-223 778.1 495 76.0
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 2.0e-222 775.8 476 76.3
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.5e-220 769.6 491 74.7
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 3.2e-220 768.5 494 74.7
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.0e-218 763.5 475 77.5
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 4.1e-215 751.5 489 76.1
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 2.7e-214 748.8 494 74.1
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 7.7e-214 747.3 485 73.6
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 7.7e-214 747.3 472 76.1
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 2.9e-213 745.3 491 74.1
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 3.8e-213 745.0 493 69.8
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 8.6e-213 743.8 482 74.5
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 1.9e-212 742.7 473 75.1
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 9.5e-212 740.3 489 72.6
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 1.2e-211 740.0 506 70.4
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 8.0e-211 737.3 493 69.4
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 1.8e-210 736.1 483 72.7
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 1.8e-210 736.1 491 72.9
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.3e-210 735.7 483 72.3
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.3e-210 735.7 483 72.3
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 4.0e-210 734.9 483 72.5
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 4.0e-210 734.9 493 69.2
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 4.4e-209 731.5 471 73.7
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 5.7e-209 731.1 493 72.0
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 5.7e-209 731.1 472 73.1
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 5.7e-209 731.1 471 72.4
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 4.9e-208 728.0 461 73.8
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 6.3e-208 727.6 492 73.2
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.1e-207 726.9 483 71.4
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 7.0e-207 724.2 473 71.7
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 9.2e-207 723.8 480 72.5
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 1.2e-206 723.4 488 71.3
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 1.6e-206 723.0 494 72.9
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 1.6e-206 723.0 492 70.1
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 7.8e-206 720.7 491 72.7
Haze_17269 Corylus avellana HOM05D003877 ORTHO05D004647 1.3e-205 719.9 461 75.7
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.7e-205 719.5 501 69.5
Potri.008G072600 Populus trichocarpa HOM05D003877 ORTHO05D004647 1.7e-205 719.5 483 72.5
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 3.8e-205 718.4 475 71.4
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 6.6e-205 717.6 470 74.3
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 3.3e-204 715.3 497 68.8
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.2e-203 713.4 473 73.8
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 1.2e-203 713.4 481 72.3
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 1.6e-203 713.0 486 72.2
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 2.1e-203 712.6 483 70.8
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 2.8e-203 712.2 487 69.8
Potri.010G184600 Populus trichocarpa HOM05D003877 ORTHO05D004647 6.1e-203 711.1 492 70.1
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 1.4e-202 709.9 484 71.3
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 1.8e-202 709.5 467 71.9
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 1.8e-202 709.5 493 70.4
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 5.2e-202 708.0 469 72.9
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 2.0e-201 706.1 492 69.1
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 2.0e-201 706.1 501 69.9
CSS0004354 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 4.4e-201 704.9 433 76.4
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 1.3e-200 703.4 499 65.9
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 1.7e-200 703.0 496 68.3
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 1.7e-200 703.0 424 78.5
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.7e-200 703.0 466 71.2
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 2.2e-200 702.6 475 71.6
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 2.9e-200 702.2 461 72.7
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 2.9e-200 702.2 573 60.6
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 6.4e-200 701.0 485 70.9
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 3.2e-199 698.7 469 70.4
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 4.1e-199 698.4 480 70.2
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.1e-199 698.4 500 67.4
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 5.4e-199 698.0 472 70.3
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 1.2e-198 696.8 461 72.2
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 3.5e-198 695.3 490 67.8
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.5e-198 695.3 523 65.2
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 2.3e-197 692.6 483 68.9
CDE04G1002 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 5.0e-197 691.4 511 66.5
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 6.6e-197 691.0 488 67.2
Sabra10G0141800 Salix brachista HOM05D003877 ORTHO05D004647 1.1e-196 690.3 525 65.5
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 1.5e-196 689.9 466 71.9
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 3.3e-196 688.7 488 68.6
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 2.8e-195 685.6 491 67.0
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 6.8e-194 681.0 454 70.5
Sed0008918 Sechium edule HOM05D003877 ORTHO05D004647 6.8e-194 681.0 492 67.1
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 8.9e-194 680.6 491 67.2
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 1.5e-193 679.9 474 68.4
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 3.4e-193 678.7 489 64.2
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 9.8e-193 677.2 489 64.4
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 9.8e-193 677.2 498 66.5
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 1.7e-192 676.4 495 67.1
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 1.7e-192 676.4 464 67.2
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 3.7e-192 675.2 489 64.0
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 3.7e-192 675.2 482 65.1
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 4.9e-192 674.9 489 64.2
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 3.2e-191 672.2 531 62.5
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 4.1e-191 671.8 489 64.2
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 1.6e-190 669.8 473 68.1
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 2.1e-190 669.5 489 66.7
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 3.5e-190 668.7 466 68.9
PSO339G0345 Papaver somniferum HOM05D003877 ORTHO05D004647 2.3e-189 666.0 467 68.3
CSS0043221 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.5e-188 663.3 406 75.9
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 4.3e-188 661.8 489 63.2
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 3.6e-187 658.7 506 64.0
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 4.7e-187 658.3 466 67.4
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 1.1e-186 657.1 491 65.4
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 1.4e-186 656.8 489 64.0
Sabra08G0053900 Salix brachista HOM05D003877 ORTHO05D004647 1.8e-186 656.4 521 63.5
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.1e-186 655.6 514 64.0
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 5.2e-186 654.8 489 63.0
CsaV3_5G010390 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.7e-184 649.8 456 67.8
MELO3C018375.2 Cucumis melo HOM05D003877 ORTHO05D004647 2.2e-184 649.4 491 65.0
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 3.7e-184 648.7 489 62.6
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 3.7e-184 648.7 489 62.6
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 3.7e-184 648.7 489 62.6
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 8.3e-184 647.5 483 62.9
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 8.3e-184 647.5 428 73.1
BraA09t41875Z Brassica rapa HOM05D003877 ORTHO05D004647 2.4e-183 646.0 489 62.4
CSS0044757 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.4e-183 646.0 388 77.3
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 3.2e-183 645.6 483 62.9
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 4.1e-183 645.2 489 62.4
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 1.2e-182 643.7 490 66.5
Os03g0818100 Oryza sativa ssp. japonica HOM05D003877 ORTHO05D004647 6.0e-182 641.3 496 63.7
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 5.6e-180 634.8 577 56.8
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 5.6e-180 634.8 484 66.3
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 9.5e-180 634.0 462 64.5
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 4.0e-178 628.6 627 52.6
Zm00001eb062330 Zea mays HOM05D003877 ORTHO05D004647 5.8e-177 624.8 502 62.9
ClCG07G004500 Citrullus lanatus HOM05D003877 ORTHO05D004647 2.4e-175 619.4 474 65.0
Sed0009338 Sechium edule HOM05D003877 ORTHO05D004647 2.3e-173 612.8 473 63.6
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 9.6e-172 607.4 437 69.3
Thhalv10002208m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 8.1e-171 604.4 426 65.7
Lsat_1_v5_gn_9_60880 Lactuca sativa HOM05D003877 ORTHO05D004647 3.8e-168 595.5 439 65.1
MELO3C034227.2 Cucumis melo HOM05D003877 ORTHO05D004647 1.4e-167 593.6 497 60.0
Atru.chr12.96 Acer truncatum HOM05D003877 ORTHO05D004647 3.2e-167 592.4 431 68.4
CsaV3_5G010430 Cucumis sativus L. HOM05D003877 ORTHO05D004647 1.1e-164 583.9 484 60.5
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 1.3e-152 543.9 511 54.0
CDE06G2086 Ceratophyllum demersum HOM05D003877 ORTHO05D004647 1.4e-151 540.4 473 58.4
CsaV3_5G010400 Cucumis sativus L. HOM05D003877 ORTHO05D004647 4.0e-146 522.3 474 56.5
Mapoly0029s0098 Marchantia polymorpha HOM05D003877 ORTHO05D004647 9.7e-140 501.1 498 50.6
CSS0003433 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 3.7e-139 499.2 380 64.5
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 2.4e-138 496.5 339 72.6
Pp3c24_6790 Physcomitrium patens HOM05D003877 ORTHO05D004647 5.1e-133 478.8 486 49.6
SMO271G0017 Selaginella moellendorffii HOM05D003877 ORTHO05D004647 7.7e-129 464.9 495 49.3
Pp3c8_15050 Physcomitrium patens HOM05D003877 ORTHO05D004647 1.3e-123 447.6 406 53.0
HPP92_019712 Vanilla planifolia HOM05D003877 ORTHO05D004647 4.8e-123 445.7 341 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2788 Anthoceros agrestis HOM05D003877 ORTHO05D004647 4.1e-114 416.0 515 45.2
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 5.0e-104 382.5 274 68.2
unitig_8.g4098 Utricularia gibba HOM05D003877 ORTHO05D004647 5.7e-92 342.4 330 52.7
SalBow3G3178 Salvia bowleyana HOM05D003877 ORTHO05D004647 5.8e-84 315.8 204 70.6
CsaV3_2G012250 Cucumis sativus L. HOM05D003877 ORTHO05D004647 2.4e-74 283.9 206 68.0
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 6.4e-59 232.6 216 55.6
SEGI_29662 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 5.8e-52 209.5 151 67.5
CBR_g38028 Chara braunii HOM05D003877 ORTHO05D004647 2.2e-43 181.0 319 34.5
Manes.09G077219 Manihot esculenta HOM05D003877 ORTHO05D004647 3.2e-42 177.2 100 84.0
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 5.6e-39 166.4 149 61.1
TPR.G10202 Trifolium pratense HOM05D003877 ORTHO05D004647 1.0e-35 155.6 109 67.0
Cre13.g568600 Chlamydomonas reinhardtii HOM05D003877 ORTHO05D004647 1.7e-35 154.8 437 29.5
Manes.18G042850 Manihot esculenta HOM05D003877 ORTHO05D004647 6.0e-33 146.4 111 68.5
Manes.06G044901 Manihot esculenta HOM05D003877 ORTHO05D004647 1.0e-32 145.6 111 68.5
Lsat_1_v5_gn_5_175980 Lactuca sativa HOM05D003877 ORTHO05D004647 3.9e-32 143.7 113 57.5
CsaV3_2G012240 Cucumis sativus L. HOM05D003877 ORTHO05D004647 3.1e-29 134.0 86 67.4
SEGI_27537 Sequoiadendron giganteum HOM05D003877 ORTHO05D004647 3.1e-29 134.0 79 77.2
Nn5g28638 Nelumbo nucifera HOM05D003877 ORTHO05D004647 2.1e-25 121.3 71 78.9
unitig_8.g4097 Utricularia gibba HOM05D003877 ORTHO05D004647 3.9e-24 117.1 102 54.9
TPR.G5082 Trifolium pratense HOM05D003877 ORTHO05D004647 2.2e-22 111.3 83 61.4
Nn7g36267 Nelumbo nucifera HOM05D003877 ORTHO05D004647 3.7e-22 110.5 62 82.3
CSS0015783 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.4e-21 108.6 110 58.2
Carub.0003s0920 Capsella rubella HOM05D000468 ORTHO05D114682 1.4e-16 92.0 119 48.7
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 1.8e-13 81.6 76 60.5
Manes.15G188901 Manihot esculenta HOM05D003877 ORTHO05D004647 3.1e-13 80.9 47 78.7
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 4.5e-12 77.0 76 57.9
MELO3C018376.2 Cucumis melo HOM05D003877 ORTHO05D004647 2.5e-10 71.2 45 66.7
CSS0003201 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 7.2e-10 69.7 59 57.6
MELO3C033083.2 Cucumis melo HOM05D003877 ORTHO05D034944 3.0e-08 64.3 43 69.8
ATR0681G284 Amborella trichopoda HOM05D003877 ORTHO05D038325 8.8e-08 62.8 85 37.6
PSO063G3403 Papaver somniferum HOM05D000240 ORTHO05D002721 9.7e-07 59.3 36 69.4
Lsat_1_v5_gn_6_23680 Lactuca sativa HOM05D001176 ORTHO05D014361 1.7e-06 58.5 59 49.2


User provided reference genes

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