Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 2.0e-149 532.3 255 100.0
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 7.2e-91 337.8 254 67.7
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.2e-90 337.0 200 78.5
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 5.2e-89 331.6 246 69.1
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 6.5e-84 314.7 238 63.4
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.1e-83 313.9 261 64.4
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 4.7e-82 308.5 202 71.3
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 3.4e-80 302.4 241 61.0
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 7.5e-80 301.2 226 65.9
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 7.5e-80 301.2 238 63.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 9.8e-80 300.8 195 74.9
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 9.1e-78 294.3 222 65.3
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.2e-77 293.9 192 71.9
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.2e-77 293.9 248 63.7
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.6e-77 293.5 261 61.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.5e-77 292.0 248 63.7
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 5.9e-77 291.6 257 58.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.0e-76 290.8 248 63.3
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.3e-76 290.4 263 57.4
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.3e-76 290.4 250 59.2
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 1.3e-76 290.4 256 57.8
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.7e-76 290.0 247 58.7
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 5.0e-76 288.5 197 68.5
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 8.6e-76 287.7 244 58.2
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.9e-75 286.6 198 67.7
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 3.3e-75 285.8 194 68.6
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 5.5e-75 285.0 214 63.6
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 7.2e-75 284.6 201 63.7
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.6e-74 283.5 245 58.4
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.7e-74 282.0 255 54.5
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 6.1e-74 281.6 191 69.6
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 6.1e-74 281.6 259 57.1
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.1e-74 281.6 204 66.7
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 6.1e-74 281.6 238 60.1
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.2e-73 278.5 202 66.3
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 6.8e-73 278.1 256 56.6
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.5e-72 276.9 192 67.7
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.5e-72 276.9 247 56.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 2.6e-72 276.2 249 54.6
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 3.4e-72 275.8 222 59.9
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.4e-72 275.8 255 55.3
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.4e-72 275.8 200 65.0
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 4.4e-72 275.4 203 64.5
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 5.7e-72 275.0 209 65.1
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 5.7e-72 275.0 257 56.4
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 7.5e-72 274.6 229 59.8
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 9.8e-72 274.2 177 70.6
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 9.8e-72 274.2 256 56.6
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 6.3e-71 271.6 215 62.3
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.1e-70 270.8 221 59.3
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 1.4e-70 270.4 222 59.9
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 2.4e-70 269.6 196 63.8
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 7.0e-70 268.1 206 60.2
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 9.2e-70 267.7 194 64.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.6e-69 266.9 199 64.8
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 4.5e-69 265.4 191 64.9
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.0e-68 264.2 211 61.1
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.7e-68 263.5 194 63.4
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.7e-68 263.5 250 56.4
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.7e-68 263.5 220 59.5
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.3e-68 263.1 177 67.8
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 2.9e-68 262.7 225 56.9
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.9e-68 262.3 170 65.9
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 3.9e-68 262.3 218 60.1
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.5e-67 260.4 198 62.6
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 9.5e-67 257.7 215 59.1
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.2e-66 257.3 204 60.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.8e-66 256.1 187 62.0
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.0e-65 254.2 204 59.8
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 2.3e-65 253.1 198 61.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 2.3e-65 253.1 201 61.7
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 4.4e-64 248.8 252 53.6
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.2e-63 246.5 192 59.4
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 2.9e-63 246.1 248 51.6
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 3.7e-63 245.7 145 79.3
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 9.2e-62 241.1 254 52.0
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 6.0e-61 238.4 247 50.6
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 2.8e-58 229.6 196 59.7
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 5.8e-56 221.9 202 56.4
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.4e-54 215.3 197 56.9
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 2.1e-53 213.4 196 54.6
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 2.7e-53 213.0 158 65.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 5.1e-52 208.8 365 36.7
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.9e-51 206.8 179 54.2
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 4.3e-51 205.7 199 52.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 4.7e-50 202.2 190 55.3
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.5e-43 179.9 185 50.3
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 8.1e-42 174.9 125 69.6
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.0e-36 157.9 155 52.3
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 8.7e-36 154.8 118 60.2
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 7.3e-35 151.8 119 60.5
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 6.2e-34 148.7 165 48.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 9.3e-30 134.8 119 57.1
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 5.6e-19 99.0 143 44.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 5.6e-19 99.0 128 44.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.4e-17 93.6 71 57.7
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 8.4e-15 85.1 67 58.2
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 3.2e-14 83.2 79 57.0
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 2.1e-13 80.5 59 61.0
FAN23G0455 Fragaria x ananassa HOM05D022609 ORTHO05D001690 7.2e-06 55.5 31 77.4


User provided reference genes

Program Settings