Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 2.9e-117 425.2 216 100.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 2.3e-74 282.7 214 69.6
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 5.7e-73 278.1 213 69.0
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 2.9e-72 275.8 221 67.4
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.8e-71 273.1 212 66.0
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 2.4e-71 272.7 209 68.4
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 3.9e-69 265.4 215 65.6
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 3.9e-69 265.4 202 70.8
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 4.3e-68 261.9 188 73.4
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 5.6e-68 261.5 206 66.0
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 7.3e-68 261.2 206 65.5
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 9.5e-68 260.8 208 68.8
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.8e-67 259.2 191 70.7
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 4.7e-67 258.5 188 71.3
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 3.1e-66 255.8 206 67.5
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 5.2e-66 255.0 177 72.3
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 4.4e-65 251.9 177 70.1
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 5.8e-65 251.5 211 63.0
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 5.8e-65 251.5 202 62.9
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.3e-64 250.4 210 64.8
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.7e-64 250.0 157 77.1
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 1.7e-64 250.0 185 68.1
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 6.4e-64 248.1 196 65.3
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 8.3e-64 247.7 154 77.3
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 8.3e-64 247.7 154 77.3
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 8.3e-64 247.7 157 76.4
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 1.4e-63 246.9 187 67.9
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 4.1e-63 245.4 157 75.8
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 4.1e-63 245.4 197 64.5
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 7.0e-63 244.6 215 62.3
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 7.0e-63 244.6 168 68.5
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 9.2e-63 244.2 214 61.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.6e-62 243.4 183 67.8
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.6e-62 243.4 214 61.2
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 2.7e-62 242.7 178 66.9
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 3.5e-62 242.3 206 61.7
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.0e-61 240.7 193 65.3
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.0e-61 239.2 210 61.0
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.0e-61 239.2 214 60.7
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 5.0e-61 238.4 159 73.6
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.0e-61 238.4 214 60.7
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 6.6e-61 238.0 184 69.6
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 6.6e-61 238.0 150 77.3
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 6.6e-61 238.0 202 60.4
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 8.6e-61 237.7 172 68.6
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.5e-60 236.9 148 77.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 1.9e-60 236.5 209 60.8
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 1.9e-60 236.5 208 61.1
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.9e-60 236.5 175 70.9
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.9e-60 236.5 212 59.0
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 3.3e-60 235.7 168 68.5
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 4.3e-60 235.3 207 62.3
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 4.3e-60 235.3 210 59.0
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.2e-59 233.8 148 76.4
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 2.1e-59 233.0 183 65.6
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.8e-59 232.6 213 59.2
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 2.8e-59 232.6 204 62.7
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 6.2e-59 231.5 201 60.2
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 2.3e-58 229.6 204 59.3
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 2.3e-58 229.6 204 58.3
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 2.3e-58 229.6 179 68.2
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 2.3e-58 229.6 163 70.6
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 8.9e-58 227.6 197 60.9
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 8.9e-58 227.6 160 67.5
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 1.5e-57 226.9 162 72.8
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 2.6e-57 226.1 216 59.7
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 3.4e-57 225.7 151 71.5
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.4e-57 225.7 193 63.2
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.4e-57 225.7 193 63.2
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 4.4e-57 225.3 143 76.2
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 5.8e-57 224.9 176 64.2
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.5e-57 224.6 193 62.7
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 3.7e-56 222.2 159 67.3
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 4.9e-56 221.9 208 55.8
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 4.9e-56 221.9 193 62.7
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 4.9e-56 221.9 147 73.5
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.4e-55 220.3 194 61.3
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.4e-55 220.3 177 65.0
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 1.9e-55 219.9 157 67.5
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.5e-54 215.7 165 65.5
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 3.0e-53 212.6 208 59.6
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 2.8e-51 206.1 165 66.7
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 4.7e-51 205.3 236 50.4
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 3.1e-50 202.6 130 74.6
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 7.6e-49 198.0 180 61.1
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 9.9e-49 197.6 198 53.5
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.4e-47 193.0 205 52.7
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.2e-46 190.7 145 65.5
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 5.2e-42 175.3 142 63.4
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.2e-41 174.1 116 72.4
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.7e-40 170.2 148 54.1
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 1.7e-40 170.2 148 54.1
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 4.9e-40 168.7 169 57.4
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.6e-38 163.7 148 53.4
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 6.9e-34 148.3 88 80.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 9.9e-33 144.4 148 49.3
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 6.7e-29 131.7 152 44.1
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 3.3e-28 129.4 133 56.4
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.9e-23 113.6 214 40.2
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 4.2e-23 112.5 121 50.4
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 3.5e-22 109.4 181 36.5
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 3.5e-22 109.4 215 37.2
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 6.2e-19 98.6 66 71.2
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 3.4e-17 92.8 145 31.7
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 5.8e-17 92.0 101 55.4
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 3.0e-13 79.7 153 32.7
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 3.1e-10 69.7 49 69.4
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 5.3e-10 68.9 81 53.1
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.3e-10 68.9 49 57.1
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 6.9e-10 68.6 122 27.9
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.3e-08 64.3 44 72.7
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 1.2e-06 57.8 39 69.2
VMungo1080G0524 Vigna mungo HOM05D007188 ORTHO05D008722 1.6e-06 57.4 32 81.2
Lalb_Chr21g0313491 Lupinus albus HOM05D007188 ORTHO05D009102 4.6e-06 55.8 29 75.9


User provided reference genes

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