Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.4e-156 556.2 284 100.0
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.1e-152 542.3 284 97.2
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 1.1e-124 450.3 281 79.7
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 8.2e-120 434.1 283 77.4
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.8e-119 433.0 282 78.0
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 7.0e-119 431.0 267 80.9
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 5.9e-118 427.9 270 80.0
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 7.7e-118 427.6 283 76.7
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 1.0e-117 427.2 284 75.0
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.3e-117 426.8 281 77.6
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 3.8e-117 425.2 282 76.6
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 8.5e-117 424.1 283 76.3
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.1e-116 423.7 286 75.9
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.2e-116 422.2 282 75.9
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.2e-116 422.2 282 75.9
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 3.2e-116 422.2 284 76.4
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 5.5e-116 421.4 282 74.8
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 2.1e-115 419.5 285 73.7
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.7e-115 419.1 281 74.0
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 3.6e-115 418.7 280 77.1
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 8.0e-115 417.5 282 74.8
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 1.4e-114 416.8 287 75.6
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 1.8e-114 416.4 258 80.6
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.5e-113 413.3 285 74.7
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 3.4e-113 412.1 285 74.0
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 7.5e-113 411.0 287 72.5
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 7.5e-113 411.0 279 74.2
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 1.3e-112 410.2 282 72.7
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 1.8e-111 406.4 258 76.7
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 4.1e-111 405.2 282 75.9
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 5.4e-111 404.8 283 72.1
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.2e-110 403.7 258 76.4
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 2.7e-110 402.5 253 80.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 2.7e-110 402.5 282 73.0
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.5e-110 402.1 282 72.7
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 5.9e-110 401.4 270 73.7
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.0e-109 400.6 263 75.7
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.3e-109 400.2 268 74.3
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 3.8e-109 398.7 283 73.5
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 3.8e-109 398.7 284 72.5
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 3.8e-109 398.7 286 71.3
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 6.5e-109 397.9 264 74.2
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 8.5e-109 397.5 278 71.9
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.5e-108 396.7 283 71.4
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 5.5e-108 394.8 259 76.4
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-107 393.7 278 71.2
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 1.6e-107 393.3 264 73.5
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.1e-107 392.9 258 75.6
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 4.7e-107 391.7 261 76.6
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 8.0e-107 391.0 282 69.9
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.0e-106 390.6 272 72.8
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.8e-106 389.8 264 73.1
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 4.0e-106 388.7 281 70.1
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 5.2e-106 388.3 282 70.2
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.2e-106 388.3 272 72.1
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 6.8e-106 387.9 258 74.8
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 6.8e-106 387.9 320 65.3
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 2.6e-105 386.0 258 74.4
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.3e-104 383.6 287 67.6
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.7e-104 383.3 268 70.9
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 6.3e-104 381.3 289 67.8
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 8.3e-104 380.9 266 70.7
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.1e-103 380.6 285 66.7
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.4e-103 380.2 282 67.0
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.8e-103 379.8 262 73.7
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.4e-103 379.4 269 72.5
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 3.1e-103 379.0 305 66.6
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 5.4e-103 378.3 258 72.5
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 7.0e-103 377.9 284 68.0
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 2.7e-102 375.9 251 72.9
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.0e-101 371.7 310 63.5
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 5.0e-101 371.7 288 66.7
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 6.6e-101 371.3 282 65.2
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 6.6e-101 371.3 282 66.3
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 6.6e-101 371.3 282 67.0
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 1.0e-98 364.0 257 70.8
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 2.3e-98 362.8 267 67.4
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 3.0e-98 362.5 277 67.1
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.2e-97 360.5 249 74.7
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 1.2e-97 360.5 280 64.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.0e-97 359.8 276 66.3
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.0e-97 359.8 282 68.1
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 7.5e-97 357.8 258 69.4
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 9.8e-97 357.5 249 72.7
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 4.9e-96 355.1 259 68.0
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 2.4e-95 352.8 262 64.9
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 2.4e-95 352.8 282 67.0
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 3.2e-95 352.4 280 65.7
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 5.4e-95 351.7 226 77.9
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.2e-94 350.5 272 66.9
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 5.9e-94 348.2 281 66.9
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.6e-92 341.7 278 61.9
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 2.3e-90 336.3 257 67.3
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 6.8e-90 334.7 290 58.3
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 1.2e-86 323.9 284 60.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 5.2e-82 308.5 319 57.7
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.0e-81 306.6 328 53.0
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.2e-78 297.4 259 56.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.6e-78 297.0 203 70.4
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.9e-76 290.0 208 74.5
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.9e-76 290.0 189 74.1
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.7e-75 285.4 217 65.0
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 6.8e-74 281.6 230 63.5
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 3.4e-73 279.3 221 66.1
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 2.8e-67 259.6 164 81.1
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 6.8e-66 255.0 163 77.9
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 6.8e-66 255.0 174 74.7
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 4.2e-63 245.7 259 49.4
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.1e-62 243.4 256 50.8
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 2.7e-62 243.0 258 49.2
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 4.0e-58 229.2 284 41.2
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 7.6e-57 224.9 146 76.7
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 5.6e-52 208.8 136 76.5
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 9.6e-52 208.0 179 62.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 7.9e-38 161.8 144 59.0
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.5e-36 157.5 163 57.1
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.7e-32 144.1 168 54.8
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 8.5e-32 141.7 280 33.2
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 8.7e-29 131.7 96 68.8
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 1.9e-28 130.6 93 71.0
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 9.7e-28 128.3 82 76.8
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-25 121.3 102 61.8
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 3.4e-25 119.8 247 32.8
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.3e-24 117.9 79 74.7
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.7e-24 117.5 82 68.3
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.2e-23 113.2 69 75.4
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 4.2e-23 112.8 68 76.5
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 2.7e-22 110.2 299 30.8
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 7.4e-20 102.1 69 72.5
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.3e-08 64.7 91 40.7


User provided reference genes

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