Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 6.9e-90 334.0 170 100.0
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 4.5e-57 224.9 177 68.9
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 3.5e-49 198.7 175 64.0
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 6.6e-48 194.5 174 63.8
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.1e-47 193.7 170 61.8
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 1.9e-47 193.0 176 61.9
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 4.7e-46 188.3 179 60.9
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 8.0e-46 187.6 183 59.6
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 4.1e-42 175.3 186 57.5
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 9.2e-42 174.1 176 58.0
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 2.3e-40 169.5 170 54.1
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 3.0e-40 169.1 174 54.0
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 3.9e-40 168.7 164 57.3
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.5e-39 166.0 194 57.2
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 5.6e-39 164.9 188 50.0
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 1.2e-38 163.7 173 54.9
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 3.1e-37 159.1 156 56.4
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 6.8e-37 157.9 184 54.9
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.6e-36 156.0 156 56.4
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 7.5e-36 154.5 157 53.5
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 7.5e-36 154.5 157 53.5
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 2.2e-35 152.9 160 53.8
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.4e-35 151.4 159 54.1
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.1e-34 150.6 151 56.3
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.4e-34 150.2 151 56.3
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 2.4e-34 149.4 153 58.2
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.4e-34 149.4 173 50.9
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 5.4e-34 148.3 197 47.2
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 7.1e-34 147.9 206 46.1
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.2e-33 147.1 158 52.5
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 2.1e-33 146.4 153 51.6
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 2.7e-33 146.0 195 46.7
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.3e-32 143.7 155 52.3
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.3e-32 143.7 194 47.9
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 1.3e-32 143.7 180 48.9
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 2.3e-32 142.9 152 55.9
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 2.3e-32 142.9 175 49.7
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.3e-32 142.9 170 51.8
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 3.9e-32 142.1 167 51.5
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 6.6e-32 141.4 152 53.3
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 6.6e-32 141.4 144 55.6
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 3.3e-31 139.0 162 52.5
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.6e-30 136.7 154 51.9
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.8e-30 136.0 182 47.8
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 2.8e-30 136.0 168 48.8
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 3.6e-30 135.6 152 48.7
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 6.2e-30 134.8 194 44.8
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 1.4e-29 133.7 180 50.0
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 2.3e-29 132.9 180 45.0
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 2.3e-29 132.9 145 52.4
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 3.1e-29 132.5 200 45.0
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 5.2e-29 131.7 177 48.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 5.2e-29 131.7 155 52.9
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 6.8e-29 131.3 168 50.0
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 8.9e-29 131.0 179 48.0
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.5e-28 130.2 165 49.1
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.0e-28 129.8 151 49.0
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 7.6e-28 127.9 201 43.3
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 9.9e-28 127.5 201 43.3
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.7e-27 126.7 177 45.2
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 6.4e-27 124.8 170 46.5
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 6.4e-27 124.8 150 48.7
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.4e-26 123.6 151 48.3
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.9e-26 123.2 188 43.1
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 2.4e-26 122.9 153 48.4
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 3.2e-26 122.5 158 44.9
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 4.1e-26 122.1 190 43.2
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 5.4e-26 121.7 164 45.1
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 5.4e-26 121.7 164 45.1
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 9.2e-26 120.9 161 46.6
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 9.2e-26 120.9 145 49.7
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 9.2e-26 120.9 190 46.3
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 9.2e-26 120.9 167 45.5
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 9.2e-26 120.9 160 46.9
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.1e-25 119.8 215 39.1
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.1e-25 119.8 185 44.3
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 2.7e-25 119.4 189 41.3
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 7.8e-25 117.9 142 52.8
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.3e-24 117.1 158 44.9
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.7e-24 116.7 164 45.7
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.7e-24 116.7 164 45.7
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 2.3e-24 116.3 152 46.1
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 3.0e-24 115.9 164 45.7
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 3.0e-24 115.9 171 48.5
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 5.1e-24 115.2 185 43.2
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 6.6e-24 114.8 178 45.5
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 8.6e-24 114.4 142 47.9
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 1.1e-23 114.0 173 43.4
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 2.5e-23 112.8 165 44.2
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.3e-23 112.5 190 40.0
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 5.6e-23 111.7 149 45.0
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.2e-22 110.5 162 43.8
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 1.2e-22 110.5 147 46.9
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.6e-22 110.2 148 48.0
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.6e-22 110.2 179 41.9
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.1e-22 109.8 165 43.0
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.1e-22 109.8 180 41.7
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 3.6e-22 109.0 128 47.7
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 4.7e-22 108.6 130 47.7
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 6.2e-22 108.2 228 37.3
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 8.1e-22 107.8 142 46.5
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 3.1e-21 105.9 175 42.3
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 8.9e-21 104.4 185 38.4
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 1.2e-20 104.0 131 46.6
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 1.2e-20 104.0 167 44.3
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 5.8e-20 101.7 215 34.0
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 7.6e-20 101.3 213 38.0
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 7.6e-20 101.3 217 33.2
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 7.6e-20 101.3 141 43.3
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 9.9e-20 100.9 130 50.8
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 9.9e-20 100.9 149 45.6
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.3e-19 100.5 128 47.7
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 2.2e-19 99.8 194 37.6
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 3.8e-19 99.0 129 48.1
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.1e-18 97.4 236 33.5
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 4.2e-18 95.5 147 42.2
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.1e-17 93.2 133 44.4
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 7.8e-17 91.3 94 53.2
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.0e-16 90.9 217 32.7
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 3.9e-16 89.0 116 46.6
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 1.5e-15 87.0 97 55.7
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.9e-15 86.7 84 56.0
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.4e-13 80.5 118 45.8
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 2.6e-12 76.3 144 37.5
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 3.4e-12 75.9 134 36.6
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 9.9e-12 74.3 123 39.8
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.8e-11 72.4 143 35.7
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 4.9e-11 72.0 97 44.3
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 4.9e-11 72.0 97 44.3
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 4.9e-11 72.0 162 37.0
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 1.9e-10 70.1 157 34.4
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 5.4e-10 68.6 145 34.5
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 7.1e-10 68.2 122 38.5
BcaC08g44071 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-08 64.3 57 59.6
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 6.7e-08 61.6 125 30.4
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 6.7e-08 61.6 127 31.5
BcaC04g22405 Brassica carinata HOM05D005169 ORTHO05D006436 1.5e-07 60.5 57 57.9
C09p19720 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-07 60.5 57 57.9
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 7.4e-07 58.2 54 50.0


User provided reference genes

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