Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1383 Trochodendron aralioides HOM05D002442 ORTHO05D002670 6.4e-51 203.8 100 100.0
TAR375G0669 Trochodendron aralioides HOM05D002442 ORTHO05D002670 1.2e-28 129.8 87 80.5
TAR375G0492 Trochodendron aralioides HOM05D002442 ORTHO05D002670 1.1e-26 123.2 86 76.7
TAR374G0749 Trochodendron aralioides HOM05D002442 ORTHO05D002670 2.1e-22 109.0 87 67.8
TAR629G2616 Trochodendron aralioides HOM05D002442 ORTHO05D002670 2.9e-19 98.6 87 60.9
Nn6g33727 Nelumbo nucifera HOM05D002442 ORTHO05D002670 7.9e-17 90.5 87 56.3
Actinidia30947 Actinidia chinensis HOM05D002442 ORTHO05D002670 3.9e-16 88.2 84 56.0
Prupe.2G118700 Prunus persica HOM05D002442 ORTHO05D002670 1.3e-14 83.2 84 52.4
Nn1g00722 Nelumbo nucifera HOM05D002442 ORTHO05D002670 2.1e-14 82.4 87 52.9
Actinidia05784 Actinidia chinensis HOM05D002442 ORTHO05D002670 3.1e-13 78.6 84 53.6
QL04p026533 Quercus lobata HOM05D002442 ORTHO05D002670 1.5e-12 76.3 76 51.3
QL04p026948 Quercus lobata HOM05D002442 ORTHO05D002670 1.5e-12 76.3 76 51.3
Thecc.01G401400 Theobroma cacao HOM05D002442 ORTHO05D002670 3.4e-12 75.1 79 46.8
Manes.01G273000 Manihot esculenta HOM05D002442 ORTHO05D002670 5.8e-12 74.3 79 49.4
Dinv25157 Davidia involucrata HOM05D002442 ORTHO05D002670 7.6e-12 73.9 89 51.7
QL04p026546 Quercus lobata HOM05D002442 ORTHO05D002670 7.6e-12 73.9 76 50.0
Haze_02893 Corylus avellana HOM05D002442 ORTHO05D002670 1.0e-11 73.6 85 45.9
Duzib133G0420 Durio zibethinus HOM05D002442 ORTHO05D002670 1.3e-11 73.2 76 47.4
Rhsim07G0038700 Rhododendron simsii HOM05D001455 ORTHO05D002670 1.7e-11 72.8 84 44.0
Gohir.A12G098600 Gossypium hirsutum HOM05D002442 ORTHO05D002670 3.8e-11 71.6 80 47.5
Duzib268G1041 Durio zibethinus HOM05D002442 ORTHO05D002670 1.4e-10 69.7 87 44.8
CiPaw.13G022800 Carya illinoinensis HOM05D002442 ORTHO05D002670 1.9e-10 69.3 79 46.8
COL.COLO4_12362 Corchorus olitorius HOM05D002442 ORTHO05D002670 1.9e-10 69.3 87 47.1
Gohir.D12G101800 Gossypium hirsutum HOM05D002442 ORTHO05D002670 1.9e-10 69.3 80 46.2
Gorai.008G111000 Gossypium raimondii HOM05D002442 ORTHO05D002670 1.9e-10 69.3 80 46.2
Rhsim07G0038600 Rhododendron simsii HOM05D002442 ORTHO05D002670 1.9e-10 69.3 84 44.0
CiPaw.14G017500 Carya illinoinensis HOM05D002442 ORTHO05D002670 5.5e-10 67.8 84 40.5
Dinv43594 Davidia involucrata HOM05D002442 ORTHO05D002670 9.3e-10 67.0 81 48.1
Hma1.2p1_1672F.1_g296850 Hydrangea macrophylla HOM05D002442 ORTHO05D002670 1.6e-09 66.2 90 43.3
Dinv44034 Davidia involucrata HOM05D002442 ORTHO05D002670 2.1e-09 65.9 81 46.9
Gohir.A08G140400 Gossypium hirsutum HOM05D002442 ORTHO05D002670 7.9e-09 63.9 83 39.8
Gohir.D12G102000 Gossypium hirsutum HOM05D002442 ORTHO05D002670 7.9e-09 63.9 80 42.5
Gorai.004G167700 Gossypium raimondii HOM05D002442 ORTHO05D002670 7.9e-09 63.9 83 39.8
Gorai.008G111200 Gossypium raimondii HOM05D002442 ORTHO05D002670 1.0e-08 63.5 80 42.5
Atru.chr5.83 Acer truncatum HOM05D002442 ORTHO05D002670 1.3e-08 63.2 90 44.4
Cfa011034 Carpinus fangiana HOM05D002442 ORTHO05D002670 1.3e-08 63.2 53 52.8
Cpa.g.sc52.78 Carica papaya HOM05D002442 ORTHO05D002670 1.8e-08 62.8 89 41.6
Gohir.A12G099000 Gossypium hirsutum HOM05D002442 ORTHO05D002670 1.8e-08 62.8 91 40.7
Ah.09g234080 Amaranthus hybridus HOM05D002442 ORTHO05D002670 2.3e-08 62.4 80 46.2
ATR0665G061 Amborella trichopoda HOM05D002442 ORTHO05D002670 5.1e-08 61.2 69 55.1
Ciclev10018460m.g Citrus clementina HOM05D002442 ORTHO05D002670 5.1e-08 61.2 87 47.1
Manes.05G057500 Manihot esculenta HOM05D002442 ORTHO05D002670 5.1e-08 61.2 86 40.7
Oeu037423.1 Olea europaea HOM05D002442 ORTHO05D002670 6.7e-08 60.8 83 39.8
Gohir.D08G161400 Gossypium hirsutum HOM05D002442 ORTHO05D002670 8.7e-08 60.5 83 38.6
TWI59G1236 Tripterygium wilfordii HOM05D002442 ORTHO05D002670 1.1e-07 60.1 92 37.0
Sabra14G0037400 Salix brachista HOM05D002442 ORTHO05D002670 1.5e-07 59.7 81 49.4
Sabra14G0039500 Salix brachista HOM05D002442 ORTHO05D002670 1.5e-07 59.7 81 49.4
EL10Ac8g20227 Beta vulgaris HOM05D002442 ORTHO05D002670 1.9e-07 59.3 76 46.1
Potri.002G140200 Populus trichocarpa HOM05D002442 ORTHO05D002670 1.9e-07 59.3 75 46.7
FvH4_7g08960 Fragaria vesca HOM05D002442 ORTHO05D002670 2.5e-07 58.9 85 45.9
FAN06G2407 Fragaria x ananassa HOM05D002442 ORTHO05D002670 2.5e-07 58.9 85 45.9
RcHm_v2.0_Chr1g0344441 Rosa chinensis HOM05D002442 ORTHO05D002670 2.5e-07 58.9 85 45.9
TWI14G0765 Tripterygium wilfordii HOM05D002442 ORTHO05D002670 3.3e-07 58.5 83 39.8
CANSAT25G3091 Cannabis sativa HOM05D002442 ORTHO05D002670 4.3e-07 58.2 84 40.5
Glyma.01G094200 Glycine max HOM05D002442 ORTHO05D002670 5.7e-07 57.8 89 36.0
Potri.014G052600 Populus trichocarpa HOM05D002442 ORTHO05D002670 5.7e-07 57.8 84 47.6
PGR042G0727 Punica granatum HOM05D002442 ORTHO05D002670 5.7e-07 57.8 75 42.7
Gohir.A08G028700 Gossypium hirsutum HOM05D002442 ORTHO05D002670 7.4e-07 57.4 83 36.1
vmacro13528 Vaccinium macrocarpon HOM05D002442 ORTHO05D002670 9.6e-07 57.0 79 44.3
MSTRG.28136 Avicennia marina HOM05D002442 ORTHO05D002670 1.6e-06 56.2 88 43.2
CDE12G0937 Ceratophyllum demersum HOM05D002442 ORTHO05D002670 1.6e-06 56.2 85 38.8
Eucgr.E01663 Eucalyptus grandis HOM05D002442 ORTHO05D002670 1.6e-06 56.2 79 41.8
FAN01G1077 Fragaria x ananassa HOM05D002442 ORTHO05D002670 1.6e-06 56.2 85 44.7
FAN03G1881 Fragaria x ananassa HOM05D002442 ORTHO05D002670 1.6e-06 56.2 85 44.7
TWI23G1321 Tripterygium wilfordii HOM05D002442 ORTHO05D002670 1.6e-06 56.2 92 37.0
Gohir.D08G039432 Gossypium hirsutum HOM05D002442 ORTHO05D002670 2.1e-06 55.8 83 34.9
Gorai.004G038200 Gossypium raimondii HOM05D002442 ORTHO05D002670 2.1e-06 55.8 83 34.9
Phvul.008G139000 Phaseolus vulgaris HOM05D002442 ORTHO05D002670 2.1e-06 55.8 84 38.1
CDE04G0084 Ceratophyllum demersum HOM05D002442 ORTHO05D002670 4.8e-06 54.7 85 41.2
Oeu034852.1 Olea europaea HOM05D002442 ORTHO05D002670 4.8e-06 54.7 88 43.2
Aqoxy3G02578 Aquilegia oxysepala HOM05D002442 ORTHO05D002670 6.2e-06 54.3 88 39.8
Sc02g0003230 Simmondsia chinensis HOM05D002442 ORTHO05D002670 8.2e-06 53.9 84 46.4


User provided reference genes

Program Settings