Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 1.7e-112 409.5 218 100.0
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 2.4e-66 256.1 194 73.7
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 2.4e-66 256.1 191 73.3
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 3.8e-64 248.8 214 65.4
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 1.8e-61 240.0 193 70.5
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 8.7e-61 237.7 199 67.8
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 8.7e-61 237.7 199 67.8
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 2.5e-60 236.1 202 65.3
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 2.8e-59 232.6 200 67.5
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 1.4e-58 230.3 198 65.2
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 1.8e-58 229.9 195 68.2
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 2.4e-58 229.6 192 67.2
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 6.9e-58 228.0 205 64.4
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 2.6e-57 226.1 193 68.4
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 3.4e-57 225.7 194 66.0
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 4.5e-57 225.3 194 65.5
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 1.7e-56 223.4 195 67.7
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 2.9e-56 222.6 202 63.9
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 4.9e-56 221.9 205 63.4
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 8.4e-56 221.1 200 66.0
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 1.1e-55 220.7 217 60.4
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 3.2e-55 219.2 200 66.0
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 4.2e-55 218.8 186 66.7
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 4.2e-55 218.8 195 65.1
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 9.3e-55 217.6 196 62.8
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 2.7e-54 216.1 195 63.6
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 6.0e-54 214.9 214 61.2
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 1.3e-53 213.8 196 64.3
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 3.9e-53 212.2 188 64.9
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 3.9e-53 212.2 197 60.4
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 1.5e-52 210.3 187 64.2
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 1.5e-52 210.3 188 64.4
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 4.3e-52 208.8 200 58.0
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 7.4e-52 208.0 181 65.2
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 9.6e-52 207.6 207 61.8
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 3.7e-51 205.7 188 63.3
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 3.7e-51 205.7 194 62.4
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 6.2e-51 204.9 186 65.1
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 2.4e-50 203.0 196 60.2
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 2.4e-50 203.0 159 67.3
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 3.1e-50 202.6 160 69.4
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 4.0e-50 202.2 144 75.7
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 6.9e-50 201.4 193 57.0
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 6.9e-50 201.4 199 59.3
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 6.9e-50 201.4 157 70.1
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 6.9e-50 201.4 194 62.4
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 9.0e-50 201.1 194 61.9
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 1.2e-49 200.7 206 59.2
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 2.0e-49 199.9 197 59.9
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 4.5e-49 198.7 205 57.1
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 2.2e-48 196.4 197 57.9
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 2.9e-48 196.1 196 58.2
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 2.9e-48 196.1 199 58.3
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 3.8e-48 195.7 197 56.3
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 4.9e-48 195.3 196 58.2
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 6.5e-48 194.9 194 59.3
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 6.5e-48 194.9 194 59.3
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 1.4e-47 193.7 220 54.5
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 5.5e-47 191.8 189 57.1
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 5.5e-47 191.8 183 64.5
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 7.1e-47 191.4 197 57.4
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 2.1e-46 189.9 200 57.5
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 2.1e-46 189.9 184 57.1
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 4.6e-46 188.7 175 61.7
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 6.0e-46 188.3 194 58.2
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 6.0e-46 188.3 186 59.7
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 1.8e-45 186.8 184 62.0
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 3.0e-45 186.0 203 56.2
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 3.9e-45 185.7 194 57.2
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 5.1e-45 185.3 206 57.3
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 8.7e-45 184.5 211 53.6
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 8.7e-45 184.5 196 58.2
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 8.7e-45 184.5 197 55.8
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 4.3e-44 182.2 192 56.2
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 9.6e-44 181.0 194 56.2
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 1.3e-43 180.6 194 55.2
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 1.6e-43 180.3 193 56.5
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 2.1e-43 179.9 218 53.7
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 2.8e-43 179.5 218 52.3
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 2.8e-43 179.5 218 53.2
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 3.7e-43 179.1 194 58.2
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 6.3e-43 178.3 191 56.5
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 6.3e-43 178.3 159 62.9
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 6.3e-43 178.3 191 56.5
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 6.3e-43 178.3 159 62.9
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 8.2e-43 177.9 193 57.5
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 8.2e-43 177.9 133 72.2
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 8.2e-43 177.9 194 56.7
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 1.1e-42 177.6 193 57.5
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 1.4e-42 177.2 194 56.7
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 3.1e-42 176.0 191 55.5
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 6.9e-42 174.9 194 54.6
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 6.9e-42 174.9 194 54.6
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 9.0e-42 174.5 208 51.9
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 9.0e-42 174.5 208 51.9
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 1.2e-41 174.1 208 51.9
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 2.0e-41 173.3 191 55.5
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 5.9e-41 171.8 209 52.6
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 1.9e-39 166.8 199 51.3
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 6.1e-38 161.8 174 57.5
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 6.1e-38 161.8 264 45.1
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 7.9e-38 161.4 199 53.8
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.5e-36 157.1 133 67.7
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 7.4e-36 154.8 189 50.8
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 1.0e-29 134.4 97 73.2
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 1.4e-29 134.0 115 65.2
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 8.8e-29 131.3 157 49.0
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 8.2e-27 124.8 152 48.0
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 1.1e-26 124.4 199 42.7
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 6.5e-24 115.2 160 43.8
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 2.5e-23 113.2 201 42.3
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 4.4e-20 102.4 160 45.0
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 8.2e-19 98.2 196 42.3
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 1.6e-17 94.0 94 57.4
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 5.9e-17 92.0 206 38.8
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 1.6e-14 84.0 97 48.5
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 1.6e-09 67.4 101 48.5
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.0e-08 64.7 59 59.3
FAN09G3753 Fragaria x ananassa HOM05D001104 ORTHO05D008876 2.9e-08 63.2 63 54.0
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 3.8e-08 62.8 46 71.7
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 5.0e-08 62.4 62 53.2


User provided reference genes

Program Settings