Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.5e-124 449.5 232 100.0
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 2.0e-95 352.8 235 80.4
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.3e-94 350.1 234 80.8
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 3.1e-93 345.5 234 78.6
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 3.5e-92 342.0 228 78.9
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 1.3e-91 340.1 234 76.5
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 2.3e-91 339.3 238 76.9
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 7.3e-90 334.3 230 78.7
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 1.0e-88 330.5 236 77.1
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.4e-88 330.1 241 73.0
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 8.9e-88 327.4 241 74.7
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.5e-87 326.6 235 72.8
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.6e-87 325.9 232 72.8
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 3.4e-87 325.5 232 72.0
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 3.4e-87 325.5 236 73.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 9.8e-87 323.9 234 72.2
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 2.2e-86 322.8 227 77.1
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 2.9e-86 322.4 232 72.4
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.9e-86 322.4 231 74.0
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 2.9e-86 322.4 234 71.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 4.9e-86 321.6 234 74.8
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 6.4e-86 321.2 233 72.1
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 1.1e-85 320.5 233 70.8
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.4e-85 320.1 224 74.6
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 2.4e-85 319.3 228 72.4
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 7.0e-85 317.8 230 71.7
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 9.2e-85 317.4 238 69.7
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.2e-84 317.0 230 71.7
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.6e-84 316.6 229 72.1
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 2.0e-84 316.2 235 71.5
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 2.7e-84 315.8 230 71.7
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 2.7e-84 315.8 232 74.1
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 3.5e-84 315.5 226 71.2
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 3.5e-84 315.5 226 71.2
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 4.6e-84 315.1 235 71.5
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 5.9e-84 314.7 237 71.3
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 7.8e-84 314.3 238 69.7
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 7.8e-84 314.3 231 71.4
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.7e-83 313.2 226 71.2
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.7e-83 313.2 226 71.2
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 5.0e-83 311.6 232 71.6
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 6.6e-83 311.2 233 72.5
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.1e-82 310.5 231 71.9
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.5e-82 310.1 232 71.1
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-82 309.7 231 71.0
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 4.3e-82 308.5 233 72.1
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.2e-81 307.0 236 71.2
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-81 306.6 232 70.7
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 2.1e-81 306.2 233 72.1
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.8e-81 305.8 187 82.9
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 2.8e-81 305.8 236 70.3
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 3.6e-81 305.4 234 68.4
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 4.7e-81 305.1 233 70.8
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 8.0e-81 304.3 231 68.4
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 1.1e-80 303.9 225 67.6
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.8e-80 303.1 247 66.4
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 6.8e-80 301.2 229 70.7
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 8.9e-80 300.8 258 64.0
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.2e-79 300.4 237 69.6
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.2e-79 300.4 235 68.9
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.0e-79 299.7 230 70.4
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 2.6e-79 299.3 232 68.5
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.3e-78 297.0 232 66.8
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.9e-78 295.8 232 68.5
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.1e-77 293.9 228 68.9
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 2.0e-76 289.7 200 75.5
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.0e-75 287.3 212 67.9
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.3e-75 286.2 228 67.5
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 6.6e-75 284.6 232 69.0
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 6.6e-75 284.6 231 64.9
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.1e-74 283.9 229 65.9
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.9e-74 283.1 236 67.8
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.9e-74 283.1 237 66.7
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.5e-74 282.7 241 65.6
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 9.5e-74 280.8 241 65.1
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 8.1e-73 277.7 236 65.7
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 8.9e-72 274.2 246 63.8
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.2e-71 273.9 236 65.3
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.6e-71 272.7 228 66.2
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.7e-70 270.0 214 65.9
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.7e-70 270.0 238 60.9
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 7.1e-69 264.6 229 64.2
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 3.5e-68 262.3 238 60.9
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.3e-67 260.4 228 63.2
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 3.0e-67 259.2 236 61.4
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 3.9e-67 258.8 233 61.4
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.5e-66 254.2 232 58.6
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.5e-63 246.9 170 75.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.9e-62 242.7 146 87.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 3.8e-62 242.3 229 59.8
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 2.4e-61 239.6 204 62.3
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 4.1e-61 238.8 231 60.6
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.6e-60 236.9 192 66.1
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 1.2e-57 227.3 142 79.6
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 5.2e-56 221.9 235 54.5
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.6e-55 219.5 139 81.3
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 5.8e-55 218.4 139 79.1
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 4.0e-48 195.7 136 75.7
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 2.7e-44 183.0 123 76.4
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.3e-43 180.6 234 48.7
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.1e-42 177.6 196 49.0
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 4.3e-42 175.6 193 50.3
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.4e-40 169.9 95 81.1
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.2e-39 167.5 192 46.9
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.8e-38 162.5 229 48.5
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 5.5e-37 158.7 185 44.9
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.6e-36 157.1 140 65.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.0e-35 154.5 140 60.0
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.5e-34 149.8 228 45.2
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 2.8e-33 146.4 187 41.2
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 3.2e-29 132.9 159 43.4
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 5.3e-24 115.5 90 72.2
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.8e-17 93.2 91 60.4
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 6.9e-16 88.6 57 73.7
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 7.9e-12 75.1 146 25.3
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 3.0e-11 73.2 166 27.7
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 1.8e-08 63.9 229 27.9


User provided reference genes

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