Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 8.7e-232 806.6 406 100.0
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 8.9e-176 620.5 410 74.1
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.9e-174 615.5 401 76.6
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.2e-173 612.1 415 74.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.2e-173 612.1 407 75.7
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.2e-168 594.7 413 72.9
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.5e-167 593.2 386 76.2
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 9.8e-167 590.5 413 70.5
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 3.7e-166 588.6 396 71.5
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.0e-164 582.8 392 72.7
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.3e-163 579.3 398 72.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 3.9e-163 578.6 405 70.1
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.2e-161 573.5 405 68.6
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.2e-159 567.0 403 68.7
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.0e-159 566.2 407 68.6
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.0e-159 566.2 387 70.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.4e-159 565.5 378 72.0
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 4.4e-159 565.1 414 69.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.8e-159 564.7 398 68.8
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 7.5e-159 564.3 399 67.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.7e-158 563.1 378 72.0
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.2e-158 562.8 397 69.3
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 6.4e-158 561.2 400 68.8
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.4e-157 558.1 399 66.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 9.2e-157 557.4 416 68.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.6e-156 556.6 409 65.5
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.0e-155 553.9 383 69.2
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 3.0e-155 552.4 379 70.2
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 3.0e-155 552.4 411 68.4
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 6.6e-155 551.2 383 68.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.1e-154 550.4 379 69.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.1e-154 550.4 400 66.8
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-154 550.1 406 67.5
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.5e-154 550.1 380 68.7
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.5e-154 549.3 411 67.9
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 4.7e-153 545.0 391 69.1
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 4.7e-153 545.0 381 68.5
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 3.1e-152 542.3 401 67.1
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.0e-151 539.7 394 66.0
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.2e-150 536.2 433 62.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 4.9e-150 535.0 379 67.3
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.1e-149 533.9 401 65.6
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.4e-149 533.5 404 64.9
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.1e-148 529.6 404 64.6
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.5e-148 528.9 410 62.9
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 3.5e-148 528.9 370 68.6
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 3.5e-148 528.9 393 65.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 4.6e-148 528.5 384 65.6
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 2.3e-147 526.2 399 64.4
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 3.0e-147 525.8 386 67.1
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 6.6e-147 524.6 413 63.7
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 5.6e-146 521.5 384 67.2
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 7.3e-146 521.2 372 70.2
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 7.3e-146 521.2 410 63.9
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.2e-145 520.4 370 68.4
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.2e-145 520.4 386 66.3
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.1e-145 519.6 412 63.1
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.6e-145 518.8 381 64.6
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 6.2e-145 518.1 411 64.5
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.1e-144 517.3 404 62.9
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 4.0e-144 515.4 404 65.8
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.1e-140 503.1 378 64.6
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 2.7e-140 502.7 390 61.8
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 6.0e-140 501.5 450 60.2
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.0e-140 501.5 335 70.7
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 8.7e-139 497.7 416 61.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.9e-138 496.5 382 64.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 6.2e-137 491.5 410 62.2
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 8.1e-137 491.1 411 62.3
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 8.1e-137 491.1 411 62.3
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.8e-136 490.0 396 63.1
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.2e-135 487.3 383 64.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.5e-135 486.9 371 63.3
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 9.3e-133 477.6 404 58.7
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 3.5e-132 475.7 433 57.7
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.4e-130 468.0 391 61.4
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 4.5e-127 458.8 384 63.3
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 7.6e-127 458.0 398 59.0
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 6.4e-126 454.9 313 68.4
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.1e-125 454.1 374 60.7
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.0e-120 434.5 295 69.8
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.6e-119 433.0 304 67.4
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 5.8e-119 431.8 289 70.2
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.7e-118 430.3 286 68.9
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.6e-116 423.7 381 54.9
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.8e-112 410.2 309 63.8
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 6.1e-108 395.2 309 60.2
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 8.2e-97 358.2 292 66.4
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 3.6e-92 342.8 231 71.9
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.6e-87 326.6 258 60.9
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.5e-87 326.2 388 47.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 3.2e-85 319.7 241 65.6
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 4.2e-85 319.3 225 69.3
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 9.1e-80 301.6 255 60.0
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 5.9e-79 298.9 215 67.4
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 6.8e-75 285.4 201 71.6
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.4e-64 250.4 158 75.9
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 5.4e-64 249.2 395 36.5
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 4.1e-56 223.0 180 64.4
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.7e-44 183.0 145 64.8
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 4.7e-44 183.0 393 32.3
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.8e-43 179.1 148 60.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 9.9e-42 175.3 148 56.1
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.7e-30 135.6 98 71.4
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.8e-26 122.9 105 59.0
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.6e-23 114.8 409 28.1
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 2.1e-23 114.4 84 66.7
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 8.1e-20 102.4 364 26.9
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.5e-18 98.2 80 57.5
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.0e-18 97.8 75 60.0
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.6e-15 88.2 347 24.5
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 6.0e-15 86.3 400 27.0
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-13 82.0 67 62.7
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.9e-13 81.3 68 58.8
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.2e-10 72.0 71 40.8
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 4.5e-10 70.1 46 73.9
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.9e-09 67.4 112 37.5
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 5.1e-06 56.6 68 48.5


User provided reference genes

Program Settings