Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1220 Trochodendron aralioides HOM05D006033 ORTHO05D007112 1.5e-98 362.8 179 100.0
TAR374G1541 Trochodendron aralioides HOM05D006033 ORTHO05D007112 2.2e-62 242.7 155 80.0
Nn4g22317 Nelumbo nucifera HOM05D006033 ORTHO05D007112 2.5e-58 229.2 155 76.8
GSVIVG01008543001 Vitis vinifera HOM05D006033 ORTHO05D007112 2.1e-57 226.1 154 74.7
Thecc.03G129200 Theobroma cacao HOM05D006033 ORTHO05D007112 5.3e-56 221.5 155 74.8
Ciclev10031478m.g Citrus clementina HOM05D006033 ORTHO05D007112 5.8e-55 218.0 154 74.0
Cc03_g15140 Coffea canephora HOM05D006033 ORTHO05D007112 1.7e-54 216.5 153 69.3
Atru.chr6.1793 Acer truncatum HOM05D006033 ORTHO05D007112 5.0e-54 214.9 155 71.0
Eucgr.K02726 Eucalyptus grandis HOM05D006033 ORTHO05D007112 8.4e-54 214.2 155 69.7
ClCG03G003760 Citrullus lanatus HOM05D006033 ORTHO05D007112 1.4e-53 213.4 152 69.7
COL.COLO4_28129 Corchorus olitorius HOM05D006033 ORTHO05D007112 1.4e-53 213.4 155 71.6
CsaV3_1G009650 Cucumis sativus L. HOM05D006033 ORTHO05D007112 1.4e-53 213.4 152 69.7
CiPaw.12G043200 Carya illinoinensis HOM05D006033 ORTHO05D007112 1.9e-53 213.0 154 72.7
Potri.015G096300 Populus trichocarpa HOM05D006033 ORTHO05D007112 7.1e-53 211.1 154 70.8
TWI23G0550 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 7.1e-53 211.1 152 71.7
CSS0003528 Camellia sinensis var. sinensis HOM05D006033 ORTHO05D007112 9.3e-53 210.7 154 71.4
MSTRG.1619 Avicennia marina HOM05D006033 ORTHO05D007112 1.6e-52 209.9 153 69.9
MELO3C002361.2 Cucumis melo HOM05D006033 ORTHO05D007112 1.6e-52 209.9 154 69.5
HanXRQChr05g0155041 Helianthus annuus HOM05D006033 ORTHO05D007112 1.6e-52 209.9 152 69.1
Sed0010085 Sechium edule HOM05D006033 ORTHO05D007112 1.6e-52 209.9 152 69.1
Hund02441 Selenicereus undatus HOM05D006033 ORTHO05D007112 1.6e-52 209.9 154 69.5
MD06G1141900 Malus domestica HOM05D006033 ORTHO05D007112 2.1e-52 209.5 152 70.4
Prupe.5G151100 Prunus persica HOM05D006033 ORTHO05D007112 2.1e-52 209.5 153 71.2
Lj5A96T53 Lonicera japonica HOM05D006033 ORTHO05D007112 3.5e-52 208.8 153 69.9
Actinidia36806 Actinidia chinensis HOM05D006033 ORTHO05D007112 4.6e-52 208.4 154 72.7
Cfa018795 Carpinus fangiana HOM05D006033 ORTHO05D007112 7.9e-52 207.6 152 71.1
Manes.06G119600 Manihot esculenta HOM05D006033 ORTHO05D007112 7.9e-52 207.6 155 71.0
MD14G1157100 Malus domestica HOM05D006033 ORTHO05D007112 1.0e-51 207.2 152 69.1
Os02g0506500 Oryza sativa ssp. japonica HOM05D006033 ORTHO05D007112 1.0e-51 207.2 156 66.7
QL10p002899 Quercus lobata HOM05D006033 ORTHO05D007112 1.0e-51 207.2 152 69.1
Peaxi162Scf00089g00624 Petunia axillaris HOM05D006033 ORTHO05D007112 1.3e-51 206.8 154 70.1
Actinidia08871 Actinidia chinensis HOM05D006033 ORTHO05D007112 1.8e-51 206.5 151 72.2
Aqoxy5G03378 Aquilegia oxysepala HOM05D006033 ORTHO05D007112 2.3e-51 206.1 155 69.0
Nitab4.5_0004750g0050 Nicotiana tabacum HOM05D006033 ORTHO05D007112 2.3e-51 206.1 154 70.1
CANSAT80G2253 Cannabis sativa HOM05D006033 ORTHO05D007112 3.0e-51 205.7 151 67.5
PGSC0003DMG401015240 Solanum tuberosum HOM05D006033 ORTHO05D007112 3.0e-51 205.7 154 70.1
Haze_07138 Corylus avellana HOM05D006033 ORTHO05D007112 3.9e-51 205.3 152 70.4
Lsat_1_v5_gn_5_13720 Lactuca sativa HOM05D006033 ORTHO05D007112 3.9e-51 205.3 154 66.9
Cpa.g.sc13.116 Carica papaya HOM05D006033 ORTHO05D007112 6.7e-51 204.5 152 69.7
Sabra15G0117100 Salix brachista HOM05D006033 ORTHO05D007112 6.7e-51 204.5 154 67.5
CAN.G352.14 Capsicum annuum HOM05D006033 ORTHO05D007112 8.7e-51 204.1 154 69.5
Duzib205G1080 Durio zibethinus HOM05D006033 ORTHO05D007112 8.7e-51 204.1 155 69.7
FAN08G2192 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.5e-50 203.4 153 67.3
Gohir.A12G189600 Gossypium hirsutum HOM05D006033 ORTHO05D007112 1.5e-50 203.4 156 67.9
PGR044G2394 Punica granatum HOM05D006033 ORTHO05D007112 1.5e-50 203.4 154 68.8
FAN13G1806 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.9e-50 203.0 153 66.7
arahy.Tifrunner.gnm1.ann1.Z456W4 Arachis hypogaea HOM05D006033 ORTHO05D007112 4.3e-50 201.8 152 66.4
FAN18G2263 Fragaria x ananassa HOM05D006033 ORTHO05D007112 4.3e-50 201.8 153 66.7
Ah.02g114900 Amaranthus hybridus HOM05D006033 ORTHO05D007112 5.7e-50 201.4 158 66.5
PSO478G4249 Papaver somniferum HOM05D006033 ORTHO05D007112 9.7e-50 200.7 156 66.7
EL10Ac5g11413 Beta vulgaris HOM05D006033 ORTHO05D007112 1.3e-49 200.3 157 67.5
FAN04G2747 Fragaria x ananassa HOM05D006033 ORTHO05D007112 1.3e-49 200.3 153 66.0
Solyc03g111340.4 Solanum lycopersicum HOM05D006033 ORTHO05D007112 1.3e-49 200.3 154 68.8
Ca_16046_v3 Cicer arietinum L. HOM05D006033 ORTHO05D007112 1.6e-49 199.9 152 66.4
RcHm_v2.0_Chr7g0190201 Rosa chinensis HOM05D006033 ORTHO05D007112 1.6e-49 199.9 153 66.0
Migut.E01431 Erythranthe guttata HOM05D006033 ORTHO05D007112 3.7e-49 198.7 152 65.8
Glyma.17G130200 Glycine max HOM05D006033 ORTHO05D007112 3.7e-49 198.7 152 67.8
Sopen03g030470 Solanum pennellii HOM05D006033 ORTHO05D007112 3.7e-49 198.7 154 68.2
Gohir.D12G192000 Gossypium hirsutum HOM05D006033 ORTHO05D007112 4.8e-49 198.4 156 66.7
AUR62029613 Chenopodium quinoa HOM05D006033 ORTHO05D007112 6.3e-49 198.0 151 68.2
Glyma.05G048200 Glycine max HOM05D006033 ORTHO05D007112 6.3e-49 198.0 152 67.1
AUR62034824 Chenopodium quinoa HOM05D006033 ORTHO05D007112 1.1e-48 197.2 154 66.9
Psat5g051280 Pisum sativum HOM05D006033 ORTHO05D007112 1.4e-48 196.8 153 64.7
arahy.Tifrunner.gnm1.ann1.YV4Q3G Arachis hypogaea HOM05D006033 ORTHO05D007112 1.8e-48 196.4 152 65.8
Phvul.003G211200 Phaseolus vulgaris HOM05D006033 ORTHO05D007112 2.4e-48 196.1 152 67.1
VMungo1215G0762 Vigna mungo HOM05D006033 ORTHO05D007112 6.9e-48 194.5 156 66.0
PSO017G2963 Papaver somniferum HOM05D006033 ORTHO05D007112 1.2e-47 193.7 162 64.2
Lalb_Chr08g0237161 Lupinus albus HOM05D006033 ORTHO05D007112 2.6e-47 192.6 152 65.8
unitig_46.g18225 Utricularia gibba HOM05D006033 ORTHO05D007112 3.4e-47 192.2 152 64.5
Zm00001eb241690 Zea mays HOM05D006033 ORTHO05D007112 3.4e-47 192.2 156 64.1
Gorai.008G206300 Gossypium raimondii HOM05D006033 ORTHO05D007112 5.9e-47 191.4 156 64.7
Sc10g0010470 Simmondsia chinensis HOM05D006033 ORTHO05D007112 5.9e-47 191.4 153 67.3
C08p51760 Brassica napus HOM05D006033 ORTHO05D007112 7.7e-47 191.0 157 63.1
BolC8t52705H Brassica oleracea HOM05D006033 ORTHO05D007112 7.7e-47 191.0 157 63.1
THA.LOC104811587 Tarenaya hassleriana HOM05D006033 ORTHO05D007112 7.7e-47 191.0 157 64.3
TPR.G14208 Trifolium pratense HOM05D006033 ORTHO05D007112 7.7e-47 191.0 152 64.5
CARHR004850 Cardamine hirsuta HOM05D006033 ORTHO05D007112 2.2e-46 189.5 155 63.9
Medtr3g099240 Medicago truncatula HOM05D006033 ORTHO05D007112 2.9e-46 189.1 152 62.5
Medtr2g045230 Medicago truncatula HOM05D006033 ORTHO05D007112 3.8e-46 188.7 152 62.5
BcaC07g42135 Brassica carinata HOM05D006033 ORTHO05D007112 5.0e-46 188.3 157 63.7
TAR027G0002 Trochodendron aralioides HOM05D000369 ORTHO05D000253 8.5e-46 187.6 113 82.3
A10p04060 Brassica napus HOM05D006033 ORTHO05D007112 1.4e-45 186.8 157 63.7
Lj1g0005507 Lotus japonicus HOM05D006033 ORTHO05D007112 1.4e-45 186.8 152 63.8
vmacro16716 Vaccinium macrocarpon HOM05D006033 ORTHO05D007112 1.9e-45 186.4 157 63.7
BraA10t42677Z Brassica rapa HOM05D006033 ORTHO05D007112 3.2e-45 185.7 157 63.1
ATR0561G152 Amborella trichopoda HOM05D006033 ORTHO05D007112 4.2e-45 185.3 153 60.8
A09p67480 Brassica napus HOM05D006033 ORTHO05D007112 4.2e-45 185.3 157 62.4
Sp1g04220 Schrenkiella parvula HOM05D006033 ORTHO05D007112 4.2e-45 185.3 156 63.5
BraA09t42076Z Brassica rapa HOM05D006033 ORTHO05D007112 7.2e-45 184.5 158 62.0
Thhalv10007699m.g Eutrema salsugineum HOM05D006033 ORTHO05D007112 9.4e-45 184.1 156 62.2
AT1G05350 Arabidopsis thaliana HOM05D006033 ORTHO05D007112 2.7e-44 182.6 158 61.4
AL1G15150 Arabidopsis lyrata HOM05D006033 ORTHO05D007112 6.1e-44 181.4 158 60.8
C05p03680 Brassica napus HOM05D006033 ORTHO05D007112 6.1e-44 181.4 157 61.8
BolC5t29145H Brassica oleracea HOM05D006033 ORTHO05D007112 6.1e-44 181.4 157 61.8
HPP92_007005 Vanilla planifolia HOM05D006033 ORTHO05D007112 1.4e-43 180.3 157 63.1
CDE02G1207 Ceratophyllum demersum HOM05D006033 ORTHO05D007112 2.3e-43 179.5 134 70.1
TWI39G0081 Tripterygium wilfordii HOM05D006033 ORTHO05D007112 6.7e-43 177.9 153 63.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 1.5e-42 176.8 129 69.8
Carub.0001s0469 Capsella rubella HOM05D006033 ORTHO05D007112 2.0e-42 176.4 161 58.4
DCAR_021619 Daucus carota HOM05D006033 ORTHO05D007112 5.7e-42 174.9 131 68.7
SGA_v2.0_scaffold121G33024 Striga asiatica HOM05D006033 ORTHO05D007112 4.1e-40 168.7 130 65.4
Nitab4.5_0003282g0110 Nicotiana tabacum HOM05D006033 ORTHO05D007112 1.5e-39 166.8 131 67.2
MBI16_g07739_MAGBIO Magnolia biondii HOM05D006033 ORTHO05D007112 7.7e-39 164.5 132 65.9
SMO364G0767 Selaginella moellendorffii HOM05D006033 ORTHO05D007112 1.0e-38 164.1 163 54.0
Gohir.D07G055650 Gossypium hirsutum HOM05D006033 ORTHO05D007112 8.5e-38 161.0 156 58.3
SalBow8G5593 Salvia bowleyana HOM05D006033 ORTHO05D007112 1.2e-36 157.1 134 62.7
Oeu032516.1 Olea europaea HOM05D006033 ORTHO05D007112 1.6e-36 156.8 91 83.5
Potri.012G097700 Populus trichocarpa HOM05D006033 ORTHO05D007112 3.6e-36 155.6 92 81.5
Pp3c7_23140 Physcomitrium patens HOM05D006033 ORTHO05D007112 4.7e-36 155.2 165 50.9
FvH4_5g08320 Fragaria vesca HOM05D006033 ORTHO05D007112 5.1e-35 151.8 93 78.5
Mapoly0009s0069 Marchantia polymorpha HOM05D006033 ORTHO05D007112 9.7e-34 147.5 162 50.0
Lj9A479G53 Lonicera japonica HOM05D006033 ORTHO05D007112 2.2e-30 136.3 70 90.0
CANSAT80G2043 Cannabis sativa HOM05D006033 ORTHO05D007112 2.0e-23 113.2 99 59.6
Aa31LG1G19340 Aethionema arabicum HOM05D006033 ORTHO05D007112 1.3e-22 110.5 159 44.7
Dinv11172 Davidia involucrata HOM05D006033 ORTHO05D007112 2.7e-20 102.8 53 88.7
SEGI_30811 Sequoiadendron giganteum HOM05D006033 ORTHO05D007112 1.2e-18 97.4 123 49.6
Haze_26394 Corylus avellana HOM05D006033 ORTHO05D007112 3.1e-16 89.4 99 46.5
PRCOL_00005996 Prasinoderma coloniale HOM05D006033 ORTHO05D007112 1.6e-15 87.0 98 45.9
Cre13.g582350 Chlamydomonas reinhardtii HOM05D006033 ORTHO05D007112 9.4e-13 77.8 96 43.8
TAR376G0865 Trochodendron aralioides HOM05D006033 ORTHO05D007112 2.7e-12 76.3 38 94.7
Oeu008767.2 Olea europaea HOM05D006033 ORTHO05D007112 2.0e-10 70.1 43 72.1


User provided reference genes

Program Settings