Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 2.1e-100 369.0 179 100.0
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 2.6e-34 149.4 94 74.5
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.7e-30 136.7 89 70.8
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.9e-30 136.0 136 54.4
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 8.5e-30 134.4 88 69.3
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.5e-29 133.7 135 50.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 5.5e-29 131.7 141 53.2
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 3.6e-28 129.0 105 59.0
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 8.0e-28 127.9 89 64.0
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.0e-27 127.5 88 67.0
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.4e-27 127.1 96 63.5
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 1.8e-27 126.7 90 66.7
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.8e-27 126.7 89 67.4
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 2.3e-27 126.3 139 51.1
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.0e-26 123.2 153 49.0
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.7e-26 121.7 89 65.2
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.7e-26 121.7 130 51.5
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 1.3e-25 120.6 98 61.2
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 1.7e-25 120.2 89 64.0
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 3.7e-25 119.0 130 50.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 3.7e-25 119.0 82 67.1
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 3.7e-25 119.0 97 59.8
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 6.3e-25 118.2 98 62.2
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.3e-25 118.2 109 57.8
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.1e-24 117.5 85 65.9
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-24 117.5 100 61.0
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.1e-24 117.5 80 67.5
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.8e-24 116.7 100 61.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.8e-24 116.7 100 61.0
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.8e-24 116.7 100 61.0
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 4.1e-24 115.5 139 44.6
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 5.3e-24 115.2 98 59.2
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 5.3e-24 115.2 99 56.6
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 7.0e-24 114.8 100 61.0
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 9.1e-24 114.4 139 47.5
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 9.1e-24 114.4 91 58.2
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 9.1e-24 114.4 89 59.6
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.6e-23 112.8 88 55.7
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 3.5e-23 112.5 140 45.0
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 3.5e-23 112.5 93 58.1
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 7.7e-23 111.3 100 57.0
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.3e-22 110.5 122 47.5
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.3e-22 110.5 91 52.7
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.7e-22 110.2 95 55.8
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 2.9e-22 109.4 91 56.0
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 5.0e-22 108.6 89 55.1
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 5.0e-22 108.6 91 56.0
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 5.0e-22 108.6 91 57.1
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.9e-21 106.7 95 53.7
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.5e-21 106.3 133 45.1
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 4.2e-21 105.5 89 57.3
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 4.2e-21 105.5 135 43.0
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 9.4e-21 104.4 90 58.9
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 9.4e-21 104.4 86 55.8
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 9.4e-21 104.4 85 56.5
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.6e-20 103.6 91 54.9
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 1.6e-20 103.6 83 56.6
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.1e-20 103.2 90 62.2
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 2.1e-20 103.2 136 44.1
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 2.1e-20 103.2 136 44.1
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 2.1e-20 103.2 91 53.8
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 2.7e-20 102.8 86 54.7
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 4.7e-20 102.1 100 50.0
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 6.1e-20 101.7 85 56.5
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 8.0e-20 101.3 86 58.1
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.8e-19 100.1 153 41.8
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.8e-19 100.1 138 40.6
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 3.0e-19 99.4 95 53.7
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 3.0e-19 99.4 91 52.7
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 4.0e-19 99.0 81 63.0
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 6.8e-19 98.2 100 48.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 8.8e-19 97.8 108 50.0
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.2e-18 97.4 96 50.0
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 2.0e-18 96.7 86 53.5
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.0e-18 96.7 86 53.5
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.0e-18 96.7 86 53.5
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 2.0e-18 96.7 86 53.5
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 4.1e-16 89.0 85 50.6
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 7.7e-15 84.7 81 46.9
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.7e-14 83.6 59 61.0
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 1.2e-12 77.4 93 44.1
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 4.7e-12 75.5 90 44.4
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 8.8e-11 71.2 90 40.0
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.3e-09 67.4 141 33.3
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 2.8e-09 66.2 67 50.7
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 1.1e-08 64.3 64 51.6
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 3.1e-08 62.8 141 31.9
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 4.1e-08 62.4 37 75.7
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.0e-07 60.1 113 35.4
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 5.9e-07 58.5 59 50.8


User provided reference genes

Program Settings