Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.8e-113 412.5 199 100.0
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.5e-64 248.4 202 64.4
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 1.8e-57 226.5 201 60.2
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.2e-56 223.8 205 58.5
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.2e-56 223.8 205 58.5
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 3.4e-56 222.2 204 57.4
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 7.7e-56 221.1 214 57.0
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.2e-55 219.5 216 56.0
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-55 218.4 214 55.6
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 8.5e-55 217.6 135 80.0
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 1.9e-54 216.5 220 53.2
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 4.2e-54 215.3 201 56.2
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 2.6e-51 206.1 197 54.8
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 7.4e-51 204.5 195 54.9
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 7.4e-51 204.5 224 50.0
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 4.8e-50 201.8 200 56.0
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 6.3e-50 201.4 198 54.0
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 2.4e-49 199.5 222 52.7
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 4.1e-49 198.7 200 57.5
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 5.3e-49 198.4 200 57.0
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 7.0e-49 198.0 199 52.8
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 7.0e-49 198.0 199 55.8
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 9.1e-49 197.6 201 54.2
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 1.6e-48 196.8 201 55.2
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 4.5e-48 195.3 200 57.0
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.7e-47 193.4 201 53.2
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 2.2e-47 193.0 207 53.6
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 2.9e-47 192.6 210 54.3
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 4.2e-46 188.7 220 49.5
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 8.0e-45 184.5 204 50.0
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 2.3e-44 183.0 207 54.6
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 1.2e-43 180.6 206 52.4
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.2e-43 180.6 188 55.3
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 2.0e-43 179.9 206 52.4
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 3.3e-43 179.1 196 53.1
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 3.3e-43 179.1 202 53.5
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 3.3e-43 179.1 211 51.2
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 6.3e-42 174.9 203 49.3
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 8.2e-42 174.5 197 51.8
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 1.1e-41 174.1 208 47.6
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 4.1e-41 172.2 203 48.8
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 9.1e-41 171.0 228 44.7
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 1.2e-40 170.6 192 52.1
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.6e-40 170.2 205 49.3
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 2.7e-40 169.5 190 48.4
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.5e-40 169.1 250 45.6
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.5e-40 169.1 250 45.6
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.5e-40 169.1 210 50.0
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.7e-39 166.8 196 50.0
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 3.8e-39 165.6 274 39.1
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 6.5e-39 164.9 198 49.5
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.1e-37 159.8 205 47.8
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 2.3e-36 156.4 198 48.5
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 5.2e-36 155.2 209 46.4
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 6.8e-36 154.8 219 44.3
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 6.8e-36 154.8 132 60.6
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.8e-36 154.5 207 44.9
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-35 153.3 226 44.7
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 3.4e-35 152.5 198 44.9
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 3.4e-35 152.5 133 56.4
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 4.4e-35 152.1 223 43.9
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 4.4e-35 152.1 209 46.4
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.3e-34 150.6 217 47.0
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.3e-34 150.6 217 44.7
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 1.7e-34 150.2 129 59.7
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 6.3e-34 148.3 140 56.4
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 1.8e-33 146.7 213 44.1
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 2.4e-33 146.4 224 43.8
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 3.1e-33 146.0 218 43.6
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 3.1e-33 146.0 126 60.3
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 5.4e-33 145.2 195 46.7
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 7.0e-33 144.8 133 60.2
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 7.0e-33 144.8 201 45.3
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.6e-32 143.7 202 46.5
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 1.6e-32 143.7 229 41.5
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 2.0e-32 143.3 202 45.5
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.0e-32 143.3 117 65.8
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 2.0e-32 143.3 125 57.6
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 2.7e-32 142.9 178 47.8
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 3.5e-32 142.5 210 43.8
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 5.9e-32 141.7 129 56.6
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 5.9e-32 141.7 195 48.2
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 1.7e-31 140.2 135 54.8
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.8e-31 139.0 143 56.6
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 3.8e-31 139.0 195 45.1
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 5.0e-31 138.7 198 43.9
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.5e-30 136.3 127 55.9
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.2e-30 136.0 143 55.9
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 3.2e-30 136.0 202 42.1
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.2e-30 135.6 143 55.9
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 5.5e-30 135.2 198 43.9
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 7.2e-30 134.8 202 44.1
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.2e-29 134.0 143 55.2
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.6e-29 133.7 202 43.1
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 1.6e-29 133.7 174 50.0
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.1e-29 133.3 130 57.7
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 2.8e-29 132.9 198 43.9
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.1e-29 131.7 130 57.7
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 8.0e-29 131.3 204 41.2
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 8.0e-29 131.3 140 47.1
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-28 130.6 130 56.9
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 6.8e-28 128.3 108 58.3
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.2e-27 127.5 133 54.1
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 2.0e-27 126.7 199 41.2
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 3.4e-27 125.9 135 51.1
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 4.4e-27 125.6 134 51.5
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 5.7e-27 125.2 130 56.2
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.8e-27 124.4 208 38.0
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 3.7e-26 122.5 87 65.5
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 3.7e-26 122.5 131 53.4
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 4.9e-26 122.1 141 45.4
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 1.4e-25 120.6 135 53.3
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 4.1e-25 119.0 196 39.8
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 4.5e-24 115.5 173 44.5
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 7.8e-24 114.8 210 39.0
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 7.8e-24 114.8 240 36.7
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.7e-23 113.6 213 39.9
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 1.7e-23 113.6 173 41.0
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.3e-23 113.2 210 36.7
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.0e-23 112.1 220 35.5
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 4.3e-22 109.0 120 48.3
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 4.3e-22 109.0 120 48.3
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 5.6e-22 108.6 214 37.9
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 5.6e-22 108.6 138 47.1
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 5.6e-22 108.6 120 47.5
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.6e-21 107.1 96 54.2
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.6e-21 107.1 84 59.5
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 2.3e-20 103.2 130 46.9
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 3.0e-20 102.8 139 46.0
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 5.2e-20 102.1 144 45.8
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 5.2e-20 102.1 247 38.1
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 2.0e-19 100.1 89 56.2
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-19 100.1 89 56.2
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 4.4e-19 99.0 134 44.8
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 4.4e-19 99.0 134 44.8
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 5.7e-19 98.6 136 47.8
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 1.3e-18 97.4 175 42.9
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 1.8e-17 93.6 89 53.9
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.8e-17 93.6 197 37.6
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 2.4e-17 93.2 89 53.9
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 2.4e-17 93.2 89 53.9
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 3.2e-17 92.8 134 44.0
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 5.4e-17 92.0 133 42.9
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 9.2e-17 91.3 89 52.8
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 9.2e-17 91.3 89 52.8
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 1.2e-16 90.9 137 42.3
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 1.2e-16 90.9 137 42.3
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 1.6e-16 90.5 89 51.7
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 1.6e-16 90.5 89 51.7
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.6e-16 89.0 131 41.2
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 7.8e-16 88.2 89 51.7
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 1.0e-15 87.8 204 38.2
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 6.6e-15 85.1 194 33.0
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 1.1e-14 84.3 74 56.8
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 4.3e-14 82.4 211 36.5
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.2e-13 80.9 91 44.0
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 6.2e-13 78.6 130 39.2
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 6.2e-13 78.6 84 48.8
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 3.4e-11 72.8 129 39.5
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 3.4e-11 72.8 68 52.9
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 5.8e-11 72.0 223 33.6
Sp2g16550 Schrenkiella parvula HOM05D013829 ORTHO05D015952 1.3e-10 70.9 200 34.5
BcaC06g33826 Brassica carinata HOM05D013829 ORTHO05D015952 1.1e-09 67.8 201 33.3
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 3.2e-09 66.2 129 36.4
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.6e-08 63.9 130 37.7
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 7.8e-08 61.6 53 62.3
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 1.7e-07 60.5 126 38.1
AagrBONN_evm.TU.Sc2ySwM_228.3156 Anthoceros agrestis HOM05D018410 ORTHO05D021325 3.9e-07 59.3 68 41.2
C07p36420 Brassica napus HOM05D013829 ORTHO05D015952 5.0e-07 58.9 207 27.5
Carub.0005s0566 Capsella rubella HOM05D013829 ORTHO05D015952 3.3e-06 56.2 202 28.7
BcaNung05649 Brassica carinata HOM05D013829 ORTHO05D015952 4.3e-06 55.8 118 36.4


User provided reference genes

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