Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1009 Trochodendron aralioides HOM05D002654 ORTHO05D002430 6.3e-88 327.4 165 100.0
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 1.7e-40 169.9 139 68.3
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 2.4e-39 166.0 138 64.5
Nn4g23142 Nelumbo nucifera HOM05D002654 ORTHO05D002430 9.3e-31 137.5 130 59.2
Nn3g17221 Nelumbo nucifera HOM05D002654 ORTHO05D002430 7.8e-30 134.4 131 60.3
Dinv34160 Davidia involucrata HOM05D002654 ORTHO05D002430 1.1e-28 130.6 122 58.2
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 6.2e-27 124.8 129 54.3
CiPaw.06G084100 Carya illinoinensis HOM05D002654 ORTHO05D002430 1.8e-26 123.2 130 51.5
QL03p062934 Quercus lobata HOM05D002654 ORTHO05D002430 2.4e-26 122.9 129 53.5
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.2e-25 120.6 141 52.5
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.2e-25 120.6 141 52.5
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 1.2e-25 120.6 122 56.6
FAN07G1505 Fragaria x ananassa HOM05D002654 ORTHO05D002430 6.4e-24 114.8 141 49.6
FAN22G0634 Fragaria x ananassa HOM05D002654 ORTHO05D002430 6.4e-24 114.8 141 49.6
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 1.9e-23 113.2 126 51.6
Dinv16639 Davidia involucrata HOM05D002654 ORTHO05D002430 2.4e-23 112.8 137 52.6
FvH4_4g31450 Fragaria vesca HOM05D002654 ORTHO05D002430 3.2e-23 112.5 141 48.9
FAN17G2513 Fragaria x ananassa HOM05D002654 ORTHO05D002430 2.7e-22 109.4 141 48.2
GSVIVG01019998001 Vitis vinifera HOM05D002654 ORTHO05D002430 1.0e-21 107.5 112 54.5
CiPaw.11G043200 Carya illinoinensis HOM05D002654 ORTHO05D002430 3.9e-21 105.5 140 47.1
Prupe.1G273300 Prunus persica HOM05D002654 ORTHO05D002430 3.9e-21 105.5 123 48.0
Thecc.03G084900 Theobroma cacao HOM05D002654 ORTHO05D002430 6.7e-21 104.8 137 46.0
Dinv19955 Davidia involucrata HOM05D000087 ORTHO05D000439 3.3e-20 102.4 116 54.3
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 3.3e-20 102.4 117 55.6
RcHm_v2.0_Chr4g0439931 Rosa chinensis HOM05D002654 ORTHO05D002430 3.3e-20 102.4 141 48.2
Ciclev10031315m.g Citrus clementina HOM05D002654 ORTHO05D002430 4.3e-20 102.1 121 47.1
QL10p016685 Quercus lobata HOM05D002654 ORTHO05D002430 7.4e-20 101.3 140 44.3
Manes.01G186300 Manihot esculenta HOM05D002654 ORTHO05D002430 9.6e-20 100.9 130 45.4
Manes.06G093600 Manihot esculenta HOM05D002654 ORTHO05D002430 2.1e-19 99.8 141 44.0
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 2.1e-19 99.8 144 46.5
Ciclev10020017m.g Citrus clementina HOM05D002654 ORTHO05D002430 8.1e-19 97.8 119 45.4
Rhsim12G0063400 Rhododendron simsii HOM05D002654 ORTHO05D002430 1.1e-18 97.4 139 43.2
Manes.05G100700 Manihot esculenta HOM05D002654 ORTHO05D002430 1.8e-18 96.7 120 49.2
Hma1.2p1_0265F.1_g106720 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 3.1e-18 95.9 123 48.0
Sabra15G0087900 Salix brachista HOM05D002654 ORTHO05D002430 4.0e-18 95.5 142 45.1
Cpa.g.sc128.17 Carica papaya HOM05D002654 ORTHO05D002430 5.3e-18 95.1 117 46.2
Cfa018955 Carpinus fangiana HOM05D002654 ORTHO05D002430 5.3e-18 95.1 119 46.2
Actinidia19874 Actinidia chinensis HOM05D002654 ORTHO05D002430 1.2e-17 94.0 135 43.0
Manes.14G077400 Manihot esculenta HOM05D002654 ORTHO05D002430 1.5e-17 93.6 140 41.4
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 2.0e-17 93.2 124 46.8
Prupe.5G191900 Prunus persica HOM05D002654 ORTHO05D002430 2.6e-17 92.8 152 40.1
Duzib084G1162 Durio zibethinus HOM05D002654 ORTHO05D002430 3.4e-17 92.4 137 41.6
Gohir.A07G063650 Gossypium hirsutum HOM05D002654 ORTHO05D002430 5.8e-17 91.7 123 45.5
Gohir.D07G068400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 5.8e-17 91.7 127 43.3
Gorai.001G071900 Gossypium raimondii HOM05D002654 ORTHO05D002430 5.8e-17 91.7 127 43.3
CSS0006941 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 7.6e-17 91.3 130 47.7
GSVIVG01008021001 Vitis vinifera HOM05D002654 ORTHO05D002430 7.6e-17 91.3 121 46.3
CSS0036856 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 9.9e-17 90.9 138 43.5
Duzib205G1664 Durio zibethinus HOM05D002654 ORTHO05D002430 1.3e-16 90.5 137 40.9
Peaxi162Scf00036g00182 Petunia axillaris HOM05D002654 ORTHO05D002430 1.3e-16 90.5 136 42.6
MD14G1198800 Malus domestica HOM05D002654 ORTHO05D002430 2.9e-16 89.4 141 42.6
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 4.9e-16 88.6 136 42.6
CAN.G58.27 Capsicum annuum HOM05D002654 ORTHO05D002430 6.4e-16 88.2 150 42.0
Cpa.g.sc111.2 Carica papaya HOM05D002654 ORTHO05D002430 6.4e-16 88.2 143 35.7
Oeu054885.1 Olea europaea HOM05D002654 ORTHO05D002430 1.4e-15 87.0 129 38.8
Cc04_g16770 Coffea canephora HOM05D000087 ORTHO05D000439 3.2e-15 85.9 123 43.1
Peaxi162Scf00823g00217 Petunia axillaris HOM05D002654 ORTHO05D002430 3.2e-15 85.9 147 40.1
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 5.5e-15 85.1 111 45.9
Oeu033362.1 Olea europaea HOM05D002654 ORTHO05D002430 1.2e-14 84.0 153 36.6
Phvul.002G086000 Phaseolus vulgaris HOM05D002654 ORTHO05D002430 1.2e-14 84.0 138 37.0
VMungo1215G1652 Vigna mungo HOM05D002654 ORTHO05D002430 1.2e-14 84.0 138 37.0
Sed0007158 Sechium edule HOM05D002654 ORTHO05D002430 2.7e-14 82.8 120 44.2
CiPaw.12G013900 Carya illinoinensis HOM05D002654 ORTHO05D002430 3.5e-14 82.4 147 41.5
PSO339G6607 Papaver somniferum HOM05D002654 ORTHO05D002430 3.5e-14 82.4 137 41.6
COL.COLO4_24533 Corchorus olitorius HOM05D002654 ORTHO05D002430 4.6e-14 82.0 136 39.7
FAN04G1767 Fragaria x ananassa HOM05D002654 ORTHO05D002430 4.6e-14 82.0 153 38.6
Lalb_Chr17g0340621 Lupinus albus HOM05D002654 ORTHO05D002430 6.0e-14 81.6 145 36.6
Sopen05g003360 Solanum pennellii HOM05D002654 ORTHO05D002430 6.0e-14 81.6 137 42.3
ECA234G4854 Erigeron canadensis HOM05D000087 ORTHO05D000439 7.9e-14 81.3 117 44.4
PGSC0003DMG400031263 Solanum tuberosum HOM05D002654 ORTHO05D002430 7.9e-14 81.3 137 41.6
AUR62005769 Chenopodium quinoa HOM05D002654 ORTHO05D002430 1.0e-13 80.9 109 45.9
MBI02_g39064_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 1.0e-13 80.9 140 45.0
Duzib268G0299 Durio zibethinus HOM05D002654 ORTHO05D002430 1.8e-13 80.1 112 50.0
FAN08G1738 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.8e-13 80.1 157 37.6
Gohir.A12G176900 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.8e-13 80.1 124 37.9
Nitab4.5_0007501g0020 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.8e-13 80.1 160 40.6
Lsat_1_v5_gn_8_53121 Lactuca sativa HOM05D002654 ORTHO05D002430 2.3e-13 79.7 136 41.9
Lalb_Chr10g0098231 Lupinus albus HOM05D002654 ORTHO05D002430 2.3e-13 79.7 146 39.0
Haze_07337 Corylus avellana HOM05D002654 ORTHO05D002430 3.0e-13 79.3 88 50.0
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 3.0e-13 79.3 160 39.4
Solyc05g007480.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 3.0e-13 79.3 137 41.6
FvH4_5g15090 Fragaria vesca HOM05D002654 ORTHO05D002430 3.9e-13 79.0 95 49.5
Hma1.2p1_0795F.1_g218740 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 5.1e-13 78.6 125 43.2
Ah.03g135150 Amaranthus hybridus HOM05D002654 ORTHO05D002430 6.7e-13 78.2 107 45.8
CsaV3_1G005380 Cucumis sativus L. HOM05D002654 ORTHO05D002430 6.7e-13 78.2 118 41.5
AUR62028788 Chenopodium quinoa HOM05D002654 ORTHO05D002430 8.7e-13 77.8 109 45.0
HanXRQChr12g0380721 Helianthus annuus HOM05D002654 ORTHO05D002430 8.7e-13 77.8 173 37.6
RcHm_v2.0_Chr7g0181121 Rosa chinensis HOM05D002654 ORTHO05D002430 8.7e-13 77.8 142 38.7
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 8.7e-13 77.8 111 45.9
Actinidia37635 Actinidia chinensis HOM05D002654 ORTHO05D002430 1.1e-12 77.4 101 49.5
CSS0037456 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.1e-12 77.4 133 39.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 1.1e-12 77.4 118 40.7
FAN18G2581 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.1e-12 77.4 92 50.0
MBI05_g08278_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 1.1e-12 77.4 133 43.6
PSO017G0875 Papaver somniferum HOM05D002654 ORTHO05D002430 1.1e-12 77.4 133 42.1
vmacro01254 Vaccinium macrocarpon HOM05D002654 ORTHO05D002430 1.9e-12 76.6 176 35.8
CAN.G837.8 Capsicum annuum HOM05D002654 ORTHO05D002430 2.5e-12 76.3 83 50.6
FAN13G3070 Fragaria x ananassa HOM05D002654 ORTHO05D002430 2.5e-12 76.3 153 35.9
PGSC0003DMG400033102 Solanum tuberosum HOM05D002654 ORTHO05D002430 3.3e-12 75.9 95 45.3
DCAR_016544 Daucus carota HOM05D002654 ORTHO05D002430 4.3e-12 75.5 112 42.0
Gohir.D12G179400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 4.3e-12 75.5 124 37.1
Gorai.005G141100 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.3e-12 75.5 112 43.8
Nitab4.5_0000269g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 4.3e-12 75.5 73 57.5
Nitab4.5_0002352g0050 Nicotiana tabacum HOM05D002654 ORTHO05D002430 4.3e-12 75.5 85 49.4
Glyma.02G106800 Glycine max HOM05D002654 ORTHO05D002430 5.6e-12 75.1 124 37.1
PSO801G0551 Papaver somniferum HOM05D002654 ORTHO05D002430 5.6e-12 75.1 126 38.9
Glyma.01G046600 Glycine max HOM05D002654 ORTHO05D002430 7.4e-12 74.7 139 34.5
Cc11_g13080 Coffea canephora HOM05D002654 ORTHO05D002430 9.6e-12 74.3 89 50.6
ClCG04G012340 Citrullus lanatus HOM05D002654 ORTHO05D002430 1.3e-11 73.9 112 43.8
Nitab4.5_0000842g0040 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.3e-11 73.9 73 53.4
Nitab4.5_0012137g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.3e-11 73.9 73 53.4
Peaxi162Scf00274g00075 Petunia axillaris HOM05D002654 ORTHO05D002430 1.3e-11 73.9 95 44.2
MSTRG.7806 Avicennia marina HOM05D002654 ORTHO05D002430 1.6e-11 73.6 132 40.2
DCAR_024160 Daucus carota HOM05D002654 ORTHO05D002430 1.6e-11 73.6 132 38.6
Oeu022206.1 Olea europaea HOM05D002654 ORTHO05D002430 1.6e-11 73.6 103 42.7
Solyc06g069880.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 1.6e-11 73.6 86 52.3
Aqoxy3G00669 Aquilegia oxysepala HOM05D002654 ORTHO05D002430 2.1e-11 73.2 180 32.8
Sopen06g027150 Solanum pennellii HOM05D002654 ORTHO05D002430 2.1e-11 73.2 95 45.3
Gohir.D02G125400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 2.8e-11 72.8 112 43.8
Oeu010873.1 Olea europaea HOM05D002654 ORTHO05D002430 2.8e-11 72.8 103 44.7
ClCG05G024340 Citrullus lanatus HOM05D002654 ORTHO05D002430 3.7e-11 72.4 92 50.0
VMungo0251G1966 Vigna mungo HOM05D002654 ORTHO05D002430 3.7e-11 72.4 116 42.2
Atru.chr9.2262 Acer truncatum HOM05D002654 ORTHO05D002430 4.8e-11 72.0 102 46.1
Gorai.008G192500 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.8e-11 72.0 124 35.5
Gohir.A03G098250 Gossypium hirsutum HOM05D002654 ORTHO05D002430 6.2e-11 71.6 112 42.9
Gohir.A12G105550 Gossypium hirsutum HOM05D002654 ORTHO05D002430 6.2e-11 71.6 112 42.9
CAN.G628.23 Capsicum annuum HOM05D002654 ORTHO05D002430 1.1e-10 70.9 85 51.8
Lsat_1_v5_gn_4_9921 Lactuca sativa HOM05D002654 ORTHO05D002430 1.1e-10 70.9 116 44.0
Rhsim08G0156100 Rhododendron simsii HOM05D002654 ORTHO05D002430 1.1e-10 70.9 112 42.0
Lj2g0004439 Lotus japonicus HOM05D002654 ORTHO05D002430 1.4e-10 70.5 125 36.8
COL.COLO4_23006 Corchorus olitorius HOM05D002654 ORTHO05D002430 1.8e-10 70.1 113 38.9
Phvul.003G049800 Phaseolus vulgaris HOM05D002654 ORTHO05D002430 1.8e-10 70.1 116 41.4
Eucgr.B00480 Eucalyptus grandis HOM05D002654 ORTHO05D002430 2.4e-10 69.7 116 40.5
Gohir.D13G074166 Gossypium hirsutum HOM05D002654 ORTHO05D002430 2.4e-10 69.7 106 46.2
Gorai.013G084800 Gossypium raimondii HOM05D002654 ORTHO05D002430 2.4e-10 69.7 106 46.2
Oeu054883.1 Olea europaea HOM05D002654 ORTHO05D002430 3.1e-10 69.3 103 43.7
MELO3C012089.2 Cucumis melo HOM05D002654 ORTHO05D002430 4.0e-10 68.9 97 45.4
Peaxi162Scf00013g00213 Petunia axillaris HOM05D002654 ORTHO05D002430 4.0e-10 68.9 139 36.0
Peaxi162Scf06066g00003 Petunia axillaris HOM05D000087 ORTHO05D002430 4.0e-10 68.9 139 36.0
Ah.02g129730 Amaranthus hybridus HOM05D002654 ORTHO05D002430 6.9e-10 68.2 107 41.1
PGR044G2349 Punica granatum HOM05D002654 ORTHO05D002430 9.0e-10 67.8 145 33.8
CsaV3_5G032620 Cucumis sativus L. HOM05D002654 ORTHO05D002430 1.2e-09 67.4 97 43.3
Eucgr.G02509 Eucalyptus grandis HOM05D002654 ORTHO05D002430 1.2e-09 67.4 141 37.6
Gohir.A13G074101 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.5e-09 67.0 106 46.2
PGR119G1217 Punica granatum HOM05D002654 ORTHO05D002430 1.5e-09 67.0 153 39.2
Rhsim08G0155700 Rhododendron simsii HOM05D002654 ORTHO05D002430 1.5e-09 67.0 88 48.9
ECA232G0660 Erigeron canadensis HOM05D000087 ORTHO05D000439 2.0e-09 66.6 113 41.6
Sed0007876 Sechium edule HOM05D002654 ORTHO05D002430 2.0e-09 66.6 118 38.1
Solyc03g116160.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 2.0e-09 66.6 82 50.0
MD06G1192200 Malus domestica HOM05D002654 ORTHO05D002430 3.4e-09 65.9 125 39.2
Sopen03g035130 Solanum pennellii HOM05D002654 ORTHO05D002430 4.5e-09 65.5 82 48.8
MSTRG.23024 Avicennia marina HOM05D002654 ORTHO05D002430 5.8e-09 65.1 89 41.6
ECA246G5276 Erigeron canadensis HOM05D000087 ORTHO05D000439 7.6e-09 64.7 140 34.3
Peaxi162Scf01068g00316 Petunia axillaris HOM05D002654 ORTHO05D002430 7.6e-09 64.7 104 35.6
Sc12g0006310 Simmondsia chinensis HOM05D002654 ORTHO05D002430 1.3e-08 63.9 101 39.6
Manes.10G056666 Manihot esculenta HOM05D002654 ORTHO05D002430 1.7e-08 63.5 136 36.8
TWI15G0870 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 1.7e-08 63.5 94 38.3
Lsat_1_v5_gn_4_108360 Lactuca sativa HOM05D002654 ORTHO05D002430 3.8e-08 62.4 140 33.6
TWI18G0518 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 3.8e-08 62.4 134 40.3
Sed0002318 Sechium edule HOM05D002654 ORTHO05D002430 4.9e-08 62.0 131 36.6
TWI60G0873 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 4.9e-08 62.0 79 40.5
Dinv24550 Davidia involucrata HOM05D002654 ORTHO05D002430 6.5e-08 61.6 133 41.4
Gohir.D03G092800 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.1e-07 60.8 89 43.8
THA.LOC104801849 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 1.1e-07 60.8 86 45.3
PGR142G0432 Punica granatum HOM05D002654 ORTHO05D002430 1.4e-07 60.5 137 35.0
ClCG11G009990 Citrullus lanatus HOM05D002654 ORTHO05D002430 1.9e-07 60.1 102 43.1
THA.LOC104805156 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 1.9e-07 60.1 90 40.0
arahy.Tifrunner.gnm1.ann1.63G1Z6 Arachis hypogaea HOM05D002654 ORTHO05D002430 2.5e-07 59.7 113 42.5
Gohir.A03G066300 Gossypium hirsutum HOM05D002654 ORTHO05D002430 3.2e-07 59.3 89 41.6
Gorai.003G096700 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.2e-07 58.9 89 42.7
Sc04g0008200 Simmondsia chinensis HOM05D002654 ORTHO05D002430 7.1e-07 58.2 98 40.8
Oeu006506.1 Olea europaea HOM05D002654 ORTHO05D002430 9.3e-07 57.8 100 41.0
Aqoxy3G03363 Aquilegia oxysepala HOM05D002654 ORTHO05D002430 1.2e-06 57.4 121 36.4
CANSAT64G2692 Cannabis sativa HOM05D002654 ORTHO05D002430 1.2e-06 57.4 82 43.9
MELO3C008539.2 Cucumis melo HOM05D002654 ORTHO05D002430 1.2e-06 57.4 83 45.8
CsaV3_2G010730 Cucumis sativus L. HOM05D002654 ORTHO05D002430 1.2e-06 57.4 115 39.1
ATR0564G399 Amborella trichopoda HOM05D002654 ORTHO05D002430 1.6e-06 57.0 134 35.8
Sed0008815 Sechium edule HOM05D002654 ORTHO05D002430 2.1e-06 56.6 114 37.7
Migut.D01825 Erythranthe guttata HOM05D002654 ORTHO05D002430 2.7e-06 56.2 108 39.8
AUR62021705 Chenopodium quinoa HOM05D002654 ORTHO05D002430 4.6e-06 55.5 113 32.7
Medtr5g040340 Medicago truncatula HOM05D002654 ORTHO05D002430 6.0e-06 55.1 98 35.7
Glyma.08G300500 Glycine max HOM05D002654 ORTHO05D002430 7.9e-06 54.7 129 39.5


User provided reference genes

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