Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0998 Trochodendron aralioides HOM05D006423 ORTHO05D008233 1.1e-121 439.9 207 100.0
TAR623G1045 Trochodendron aralioides HOM05D006423 ORTHO05D008233 1.7e-98 362.8 198 87.9
Nn2g14478 Nelumbo nucifera HOM05D006423 ORTHO05D008233 1.2e-80 303.5 197 72.1
Rhsim11G0029000 Rhododendron simsii HOM05D006423 ORTHO05D008233 1.5e-78 296.6 200 70.0
CSS0010106 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 1.1e-76 290.4 191 71.2
PSO170G0343 Papaver somniferum HOM05D006423 ORTHO05D008233 7.7e-75 284.3 200 68.0
PSO782G4910 Papaver somniferum HOM05D006423 ORTHO05D008233 8.5e-74 280.8 200 67.0
DCAR_004588 Daucus carota HOM05D006423 ORTHO05D008233 3.2e-73 278.9 190 68.9
vmacro00241 Vaccinium macrocarpon HOM05D006423 ORTHO05D008233 5.5e-73 278.1 198 65.2
Lj8A319T61 Lonicera japonica HOM05D006423 ORTHO05D008233 9.4e-73 277.3 217 64.5
Actinidia01333 Actinidia chinensis HOM05D006423 ORTHO05D008233 3.0e-71 272.3 175 69.7
Dinv06913 Davidia involucrata HOM05D006423 ORTHO05D008233 3.9e-71 271.9 195 67.7
CSS0049051 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 5.7e-70 268.1 191 66.5
ECA240G4319 Erigeron canadensis HOM05D006423 ORTHO05D008233 7.4e-70 267.7 194 66.5
MBI10_g26061_MAGBIO Magnolia biondii HOM05D006423 ORTHO05D008233 4.8e-69 265.0 198 68.7
Aqoxy4G02654 Aquilegia oxysepala HOM05D006423 ORTHO05D008233 6.3e-69 264.6 198 65.2
Lsat_1_v5_gn_6_73261 Lactuca sativa HOM05D006423 ORTHO05D008233 1.4e-68 263.5 192 68.2
Peaxi162Scf00185g01125 Petunia axillaris HOM05D006423 ORTHO05D008233 1.4e-68 263.5 198 64.1
CAN.G474.25 Capsicum annuum HOM05D006423 ORTHO05D008233 1.2e-67 260.4 199 64.3
Sopen06g021720 Solanum pennellii HOM05D006423 ORTHO05D008233 1.2e-67 260.4 198 63.6
Ca_24452_v3 Cicer arietinum L. HOM05D006423 ORTHO05D008233 3.5e-67 258.8 190 63.2
LjContig00222g0011935 Lotus japonicus HOM05D006423 ORTHO05D008233 3.5e-67 258.8 191 64.4
Cc08_g03820 Coffea canephora HOM05D006423 ORTHO05D008233 4.5e-67 258.5 196 60.7
PGSC0003DMG400016779 Solanum tuberosum HOM05D006423 ORTHO05D008233 5.9e-67 258.1 199 63.3
Solyc06g066300.1 Solanum lycopersicum HOM05D006423 ORTHO05D008233 3.8e-66 255.4 201 64.2
arahy.Tifrunner.gnm1.ann1.K9W603 Arachis hypogaea HOM05D006423 ORTHO05D008233 5.0e-66 255.0 206 65.0
Sabra19G0051500 Salix brachista HOM05D006423 ORTHO05D008233 5.0e-66 255.0 201 64.2
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 1.1e-65 253.8 198 66.7
COL.COLO4_17915 Corchorus olitorius HOM05D006423 ORTHO05D008233 1.1e-65 253.8 198 62.6
arahy.Tifrunner.gnm1.ann1.B7BMME Arachis hypogaea HOM05D006423 ORTHO05D008233 1.5e-65 253.4 198 66.7
Lalb_Chr05g0211301 Lupinus albus HOM05D006423 ORTHO05D008233 2.5e-65 252.7 191 62.3
Gohir.A03G210100 Gossypium hirsutum HOM05D006423 ORTHO05D008233 3.2e-65 252.3 198 61.6
Psat0s769g0120 Pisum sativum HOM05D006423 ORTHO05D008233 4.2e-65 251.9 187 63.1
Potri.019G041300 Populus trichocarpa HOM05D006423 ORTHO05D008233 4.2e-65 251.9 198 64.6
CiPaw.05G040800 Carya illinoinensis HOM05D006423 ORTHO05D008233 5.5e-65 251.5 199 65.8
HanXRQChr03g0082011 Helianthus annuus HOM05D006423 ORTHO05D008233 7.2e-65 251.1 194 64.4
Haze_10785 Corylus avellana HOM05D006423 ORTHO05D008233 9.4e-65 250.8 195 67.2
Medtr5g007970 Medicago truncatula HOM05D006423 ORTHO05D008233 1.6e-64 250.0 190 61.6
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 2.7e-64 249.2 199 62.3
VMungo1215G0185 Vigna mungo HOM05D006423 ORTHO05D008233 2.7e-64 249.2 191 64.4
ClCG09G013540 Citrullus lanatus HOM05D006423 ORTHO05D008233 3.6e-64 248.8 193 62.7
Cfa005566 Carpinus fangiana HOM05D006423 ORTHO05D008233 4.7e-64 248.4 194 67.5
Eucgr.G00648 Eucalyptus grandis HOM05D006423 ORTHO05D008233 1.0e-63 247.3 199 64.3
Manes.14G151100 Manihot esculenta HOM05D006423 ORTHO05D008233 1.0e-63 247.3 202 62.9
Nitab4.5_0001632g0060 Nicotiana tabacum HOM05D006423 ORTHO05D008233 1.0e-63 247.3 199 62.3
Sc20g0000910 Simmondsia chinensis HOM05D006423 ORTHO05D008233 1.0e-63 247.3 193 62.2
Carub.0008s2271 Capsella rubella HOM05D006423 ORTHO05D008233 1.8e-63 246.5 196 64.3
CDE05G2804 Ceratophyllum demersum HOM05D006423 ORTHO05D008233 1.8e-63 246.5 207 58.0
Glyma.12G035900 Glycine max HOM05D006423 ORTHO05D008233 2.3e-63 246.1 191 63.4
arahy.Tifrunner.gnm1.ann1.WK2353 Arachis hypogaea HOM05D006423 ORTHO05D008233 3.0e-63 245.7 198 65.2
CsaV3_7G006110 Cucumis sativus L. HOM05D006423 ORTHO05D008233 3.0e-63 245.7 192 63.0
Gorai.005G259400 Gossypium raimondii HOM05D006423 ORTHO05D008233 3.0e-63 245.7 198 60.6
Prupe.1G561000 Prunus persica HOM05D006423 ORTHO05D008233 3.0e-63 245.7 201 60.7
AT5G62030 Arabidopsis thaliana HOM05D006423 ORTHO05D008233 4.0e-63 245.4 196 63.8
Thecc.02G043600 Theobroma cacao HOM05D006423 ORTHO05D008233 5.2e-63 245.0 198 60.6
Gohir.D02G231700 Gossypium hirsutum HOM05D006423 ORTHO05D008233 6.7e-63 244.6 198 60.1
THA.LOC104798941 Tarenaya hassleriana HOM05D006423 ORTHO05D008233 6.7e-63 244.6 192 63.5
Aa31LG11G1500 Aethionema arabicum HOM05D006423 ORTHO05D008233 8.8e-63 244.2 205 59.5
C03p65030 Brassica napus HOM05D006423 ORTHO05D008233 8.8e-63 244.2 192 65.1
BolC3t18761H Brassica oleracea HOM05D006423 ORTHO05D008233 8.8e-63 244.2 192 65.1
A06p28730 Brassica napus HOM05D006423 ORTHO05D008233 2.0e-62 243.0 192 64.6
BraA06t25814Z Brassica rapa HOM05D006423 ORTHO05D008233 2.0e-62 243.0 192 64.6
CARHR275820 Cardamine hirsuta HOM05D006423 ORTHO05D008233 2.0e-62 243.0 195 63.1
Phvul.002G038000 Phaseolus vulgaris HOM05D006423 ORTHO05D008233 2.0e-62 243.0 191 62.8
QL02p073223 Quercus lobata HOM05D006423 ORTHO05D008233 2.0e-62 243.0 189 66.1
FvH4_5g30480 Fragaria vesca HOM05D006423 ORTHO05D008233 2.6e-62 242.7 191 61.8
FAN08G0633 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.6e-62 242.7 191 61.8
FAN18G4202 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.6e-62 242.7 191 61.8
MELO3C018682.2 Cucumis melo HOM05D006423 ORTHO05D008233 5.7e-62 241.5 193 61.7
BcaB02g09615 Brassica carinata HOM05D006423 ORTHO05D008233 7.5e-62 241.1 193 64.2
AUR62004741 Chenopodium quinoa HOM05D006423 ORTHO05D008233 7.5e-62 241.1 194 59.3
AUR62037510 Chenopodium quinoa HOM05D006423 ORTHO05D008233 7.5e-62 241.1 198 58.1
Glyma.09G222400 Glycine max HOM05D006423 ORTHO05D008233 7.5e-62 241.1 192 63.5
FAN13G0653 Fragaria x ananassa HOM05D006423 ORTHO05D008233 9.7e-62 240.7 191 61.3
RcHm_v2.0_Chr7g0225141 Rosa chinensis HOM05D006423 ORTHO05D008233 2.2e-61 239.6 198 59.6
Duzib132G0113 Durio zibethinus HOM05D006423 ORTHO05D008233 3.7e-61 238.8 196 60.7
AL8G38790 Arabidopsis lyrata HOM05D006423 ORTHO05D008233 8.2e-61 237.7 196 62.2
Thhalv10004160m.g Eutrema salsugineum HOM05D006423 ORTHO05D008233 8.2e-61 237.7 202 60.4
Sp2g25200 Schrenkiella parvula HOM05D006423 ORTHO05D008233 8.2e-61 237.7 197 62.4
Atru.chr6.948 Acer truncatum HOM05D006423 ORTHO05D008233 1.8e-60 236.5 199 62.3
Ah.04g162870 Amaranthus hybridus HOM05D006423 ORTHO05D008233 1.8e-60 236.5 195 59.0
EL10Ac4g08897 Beta vulgaris HOM05D006423 ORTHO05D008233 1.8e-60 236.5 196 61.2
TWI14G0718 Tripterygium wilfordii HOM05D006423 ORTHO05D008233 2.4e-60 236.1 197 61.9
PGR042G0678 Punica granatum HOM05D006423 ORTHO05D008233 3.1e-60 235.7 190 62.1
HPP92_012832 Vanilla planifolia HOM05D006423 ORTHO05D008233 3.1e-60 235.7 182 59.9
MD04G1037900 Malus domestica HOM05D006423 ORTHO05D008233 2.0e-59 233.0 198 58.1
arahy.Tifrunner.gnm1.ann1.5N158K Arachis hypogaea HOM05D006423 ORTHO05D008233 8.5e-58 227.6 197 59.9
Sed0023404 Sechium edule HOM05D006423 ORTHO05D008233 8.5e-58 227.6 187 59.9
SHI26338 Sapria himalayana HOM05D006423 ORTHO05D008233 4.2e-57 225.3 197 56.3
MSTRG.11901 Avicennia marina HOM05D006423 ORTHO05D008233 5.5e-57 224.9 198 57.6
Migut.A00614 Erythranthe guttata HOM05D006423 ORTHO05D008233 1.2e-56 223.8 198 55.1
Ciclev10001185m.g Citrus clementina HOM05D006423 ORTHO05D008233 1.6e-56 223.4 184 63.0
SalBow1G0435 Salvia bowleyana HOM05D006423 ORTHO05D008233 4.7e-56 221.9 200 56.0
SalBow1G8647 Salvia bowleyana HOM05D006423 ORTHO05D008233 4.7e-56 221.9 200 56.0
SEGI_34782 Sequoiadendron giganteum HOM05D006423 ORTHO05D008233 6.8e-55 218.0 216 50.0
ATR0564G315 Amborella trichopoda HOM05D006423 ORTHO05D008233 2.6e-54 216.1 219 51.1
unitig_748.g8133 Utricularia gibba HOM05D006423 ORTHO05D008233 3.4e-54 215.7 186 57.5
Os02g0815600 Oryza sativa ssp. japonica HOM05D006423 ORTHO05D008233 5.7e-54 214.9 195 53.3
SGA_v2.0_scaffold96G29045 Striga asiatica HOM05D006423 ORTHO05D008233 9.8e-54 214.2 196 55.1
Zm00001eb258780 Zea mays HOM05D006423 ORTHO05D008233 1.1e-52 210.7 180 55.6
Mapoly0002s0072 Marchantia polymorpha HOM05D006423 ORTHO05D008233 6.5e-50 201.4 234 46.2
AagrBONN_evm.TU.Sc2ySwM_344.2159 Anthoceros agrestis HOM05D006423 ORTHO05D008233 1.2e-48 197.2 196 49.0
SMO165G0082 Selaginella moellendorffii HOM05D006423 ORTHO05D008233 4.7e-48 195.3 181 51.9
arahy.Tifrunner.gnm1.ann1.F1VCW7 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.4e-47 193.7 144 65.3
arahy.Tifrunner.gnm1.ann1.8H8UTP Arachis hypogaea HOM05D006423 ORTHO05D008233 2.0e-43 179.9 200 53.0
Pp3c15_23540 Physcomitrium patens HOM05D006423 ORTHO05D008233 5.0e-42 175.3 202 44.1
arahy.Tifrunner.gnm1.ann1.VBI12C Arachis hypogaea HOM05D006423 ORTHO05D008233 1.2e-40 170.6 148 60.8
Cre09.g408500 Chlamydomonas reinhardtii HOM05D006423 ORTHO05D008233 1.0e-39 167.5 180 46.7
Actinidia29280 Actinidia chinensis HOM05D006423 ORTHO05D008233 8.9e-39 164.5 123 60.2
arahy.Tifrunner.gnm1.ann1.Z7R28B Arachis hypogaea HOM05D006423 ORTHO05D008233 1.5e-38 163.7 145 60.0
CBR_g39210 Chara braunii HOM05D006423 ORTHO05D008233 9.8e-38 161.0 117 58.1
FAN04G1985 Fragaria x ananassa HOM05D006423 ORTHO05D008233 4.9e-37 158.7 138 57.2
PRCOL_00005581 Prasinoderma coloniale HOM05D006423 ORTHO05D008233 7.5e-30 134.8 225 36.0
GSVIVG01005261001 Vitis vinifera HOM05D006423 ORTHO05D008233 1.1e-28 131.0 130 53.1
Atru.chr6.949 Acer truncatum HOM05D006423 ORTHO05D008233 2.3e-26 123.2 83 71.1
Haze_26324 Corylus avellana HOM05D006423 ORTHO05D008233 1.9e-17 93.6 191 31.4
arahy.Tifrunner.gnm1.ann1.QX3XL1 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.9e-12 77.0 154 35.7
arahy.Tifrunner.gnm1.ann1.X0DKS7 Arachis hypogaea HOM05D006423 ORTHO05D008233 7.1e-12 75.1 88 46.6
CBR_g26331 Chara braunii HOM05D005578 ORTHO05D006969 6.2e-08 62.0 102 32.4
MCO11G524 Micromonas commoda HOM05D005578 ORTHO05D006969 3.1e-07 59.7 96 34.4
AagrBONN_evm.TU.Sc2ySwM_117.2191 Anthoceros agrestis HOM05D005578 ORTHO05D006969 6.9e-07 58.5 90 33.3
Mapoly0065s0036 Marchantia polymorpha HOM05D005578 ORTHO05D006969 9.0e-07 58.2 90 33.3
SGA_v2.0_scaffold81G26092 Striga asiatica HOM05D005578 ORTHO05D006969 1.2e-06 57.8 91 31.9
CDE08G0459 Ceratophyllum demersum HOM05D005578 ORTHO05D006969 2.0e-06 57.0 128 26.6
Zm00001eb064030 Zea mays HOM05D005578 ORTHO05D006969 4.4e-06 55.8 179 24.6
Glyma.15G008200 Glycine max HOM05D005578 ORTHO05D006969 5.8e-06 55.5 105 27.6
AL5G41540 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 9.9e-06 54.7 105 28.6
AT3G59630 Arabidopsis thaliana HOM05D005578 ORTHO05D006969 9.9e-06 54.7 105 28.6


User provided reference genes

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