Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.1e-181 639.8 325 100.0
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 5.6e-80 302.0 207 72.5
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 3.1e-78 296.2 216 67.6
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 1.4e-75 287.3 213 69.5
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.9e-75 287.0 218 67.0
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 1.9e-75 287.0 217 66.8
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 2.4e-75 286.6 217 66.8
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 3.5e-74 282.7 217 67.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 3.5e-74 282.7 219 65.8
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 4.6e-74 282.3 214 66.8
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 4.6e-74 282.3 204 68.1
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 1.0e-73 281.2 212 67.9
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 1.0e-73 281.2 220 68.2
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.3e-73 280.8 212 66.0
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 1.9e-72 276.9 210 65.7
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.9e-72 276.9 207 67.6
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 4.7e-71 272.3 212 64.6
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 6.2e-71 271.9 208 64.4
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 6.2e-71 271.9 206 66.0
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.0e-70 269.2 231 60.6
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 6.9e-70 268.5 212 66.0
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.2e-69 267.7 209 65.6
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.2e-69 267.7 215 63.7
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.2e-69 267.7 214 62.1
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 3.4e-69 266.2 218 62.8
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.8e-69 265.4 208 64.4
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 5.8e-69 265.4 208 64.4
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.3e-68 264.2 194 68.0
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.3e-68 264.2 211 62.1
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.7e-68 263.8 212 62.7
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 2.2e-68 263.5 208 64.4
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.2e-68 263.5 207 65.7
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 2.9e-68 263.1 221 65.6
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.9e-68 263.1 202 64.4
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.8e-68 262.7 211 67.3
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 3.8e-68 262.7 219 63.0
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 3.8e-68 262.7 212 65.1
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 4.9e-68 262.3 215 62.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 6.4e-68 261.9 215 61.9
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 8.4e-68 261.5 208 63.5
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 8.4e-68 261.5 217 62.7
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.1e-67 261.2 217 61.8
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 1.1e-67 261.2 214 63.1
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.1e-67 261.2 220 63.6
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.4e-67 260.8 213 62.9
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.9e-67 260.4 225 63.1
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 9.3e-67 258.1 217 63.6
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.2e-66 257.7 217 60.8
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 1.2e-66 257.7 196 65.8
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.2e-66 257.7 213 62.4
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.6e-66 257.3 216 59.7
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.6e-66 257.3 210 61.9
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 2.1e-66 256.9 214 62.1
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 3.5e-66 256.1 214 63.1
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 7.8e-66 255.0 206 62.6
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 2.3e-65 253.4 199 64.3
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 3.9e-65 252.7 215 62.3
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 6.6e-65 251.9 221 59.3
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 8.7e-65 251.5 194 63.9
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 8.7e-65 251.5 184 69.0
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.1e-64 251.1 192 63.0
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.5e-64 250.8 208 62.0
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.9e-64 250.4 213 61.5
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 2.5e-64 250.0 211 61.1
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 3.3e-64 249.6 226 62.4
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 3.3e-64 249.6 231 59.7
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 3.3e-64 249.6 213 61.5
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 4.3e-64 249.2 216 62.0
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 5.6e-64 248.8 209 60.8
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 5.6e-64 248.8 211 60.2
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 7.3e-64 248.4 208 60.6
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 9.6e-64 248.1 202 62.9
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 2.1e-63 246.9 194 62.9
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 2.1e-63 246.9 210 60.0
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 4.8e-63 245.7 147 77.6
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.2e-63 245.4 216 59.7
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 8.1e-63 245.0 207 59.9
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.1e-62 244.6 208 60.1
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 3.1e-62 243.0 179 68.2
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 4.0e-62 242.7 146 76.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.0e-61 240.4 196 62.2
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.6e-61 240.0 213 56.3
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 2.6e-61 240.0 222 56.8
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 3.4e-61 239.6 231 57.1
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 4.5e-61 239.2 213 57.3
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 4.5e-61 239.2 213 56.3
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 4.5e-61 239.2 213 56.3
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 4.5e-61 239.2 213 56.3
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.5e-61 239.2 224 57.6
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 7.6e-61 238.4 213 56.3
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.9e-60 236.5 208 59.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 4.9e-60 235.7 205 58.5
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 1.0e-57 228.0 208 57.2
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.5e-56 224.2 145 74.5
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 2.5e-56 223.4 170 64.1
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 2.5e-56 223.4 124 81.5
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 3.3e-56 223.0 211 56.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.3e-55 221.1 151 68.9
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.4e-54 216.9 204 56.9
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 2.0e-53 213.8 176 65.3
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 4.5e-53 212.6 175 61.1
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 9.9e-53 211.5 142 66.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 8.7e-49 198.4 125 76.0
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.1e-48 198.0 155 58.1
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 5.6e-48 195.7 132 68.9
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.4e-43 181.0 158 59.5
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.5e-43 180.3 154 62.3
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 2.5e-43 180.3 154 62.3
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.0e-41 173.3 119 64.7
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 2.1e-39 167.2 207 47.3
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 2.7e-34 150.2 133 57.1
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.0e-33 148.3 93 78.5
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 5.1e-33 146.0 141 56.7
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.4e-32 142.1 132 50.8
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 1.6e-31 141.0 122 53.3
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 2.2e-31 140.6 136 52.9
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 3.7e-31 139.8 81 79.0
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.4e-30 137.9 82 79.3
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 3.1e-30 136.7 128 46.9
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 7.7e-29 132.1 135 48.9
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.5e-27 127.1 129 55.0
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.0e-16 90.9 114 35.1
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.4e-09 68.2 43 65.1
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 6.3e-07 59.3 134 29.1


User provided reference genes

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