Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 2.8e-64 248.4 125 100.0
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 1.2e-51 206.5 127 81.1
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 1.6e-51 206.1 127 81.9
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 2.1e-51 205.7 115 87.0
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 2.7e-51 205.3 119 84.9
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 3.6e-51 204.9 123 84.6
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 4.7e-51 204.5 121 83.5
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 4.7e-51 204.5 127 80.3
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 6.1e-51 204.1 129 80.6
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 8.0e-51 203.8 124 81.5
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 8.0e-51 203.8 124 81.5
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 8.0e-51 203.8 124 81.5
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 1.0e-50 203.4 128 80.5
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 1.4e-50 203.0 127 81.1
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 1.8e-50 202.6 118 83.1
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 3.0e-50 201.8 127 78.7
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 6.7e-50 200.7 120 82.5
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 6.7e-50 200.7 115 85.2
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 6.7e-50 200.7 120 81.7
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 6.7e-50 200.7 125 80.8
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.5e-49 199.5 120 80.8
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 2.0e-49 199.1 120 82.5
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 2.6e-49 198.7 125 82.4
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 7.5e-49 197.2 140 73.6
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 7.5e-49 197.2 140 73.6
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 7.5e-49 197.2 117 83.8
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 9.7e-49 196.8 125 82.4
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 9.7e-49 196.8 120 81.7
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.7e-48 196.1 125 79.2
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 3.7e-48 194.9 122 80.3
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 3.7e-48 194.9 118 80.5
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 6.3e-48 194.1 125 81.6
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 8.2e-48 193.7 125 79.2
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.4e-47 192.2 122 79.5
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 2.4e-47 192.2 118 77.1
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 3.1e-47 191.8 144 69.4
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 3.1e-47 191.8 144 69.4
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 3.1e-47 191.8 118 78.0
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 5.3e-47 191.0 118 78.8
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 7.0e-47 190.7 121 78.5
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 7.0e-47 190.7 127 78.7
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 7.0e-47 190.7 125 76.0
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 9.1e-47 190.3 120 80.8
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 2.7e-46 188.7 115 80.9
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 5.9e-46 187.6 113 81.4
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 5.9e-46 187.6 119 77.3
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 1.0e-45 186.8 125 78.4
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 1.0e-45 186.8 122 77.0
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 1.0e-45 186.8 116 81.9
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 1.3e-45 186.4 116 80.2
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 2.9e-45 185.3 116 79.3
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 6.5e-45 184.1 120 78.3
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 6.5e-45 184.1 120 78.3
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 6.5e-45 184.1 116 81.0
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 1.1e-44 183.3 117 77.8
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 1.5e-44 183.0 114 80.7
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 1.9e-44 182.6 116 81.0
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 2.5e-44 182.2 116 81.0
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 2.5e-44 182.2 120 75.8
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 3.2e-44 181.8 119 77.3
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 3.2e-44 181.8 120 74.2
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 4.2e-44 181.4 114 76.3
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 5.5e-44 181.0 123 75.6
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 7.2e-44 180.6 122 75.4
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 2.1e-43 179.1 123 74.0
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 3.6e-43 178.3 122 74.6
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 1.8e-42 176.0 120 74.2
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 2.3e-42 175.6 126 73.0
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 4.0e-42 174.9 133 72.2
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 4.0e-42 174.9 120 73.3
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 5.2e-42 174.5 132 69.7
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 5.2e-42 174.5 133 72.2
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 5.2e-42 174.5 120 69.2
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 1.5e-41 172.9 125 72.8
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 1.5e-41 172.9 124 74.2
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 2.0e-41 172.6 116 75.0
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 4.4e-41 171.4 131 71.0
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 5.7e-41 171.0 113 78.8
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 5.7e-41 171.0 121 76.0
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 7.5e-41 170.6 125 72.0
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 2.2e-40 169.1 120 75.8
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 8.3e-40 167.2 117 70.1
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 4.1e-39 164.9 141 66.0
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 5.4e-39 164.5 156 59.0
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 1.0e-37 160.2 120 68.3
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 1.3e-37 159.8 115 67.8
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.7e-37 159.5 115 72.2
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 8.6e-37 157.1 119 71.4
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.5e-36 156.4 115 71.3
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 4.2e-36 154.8 177 51.4
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 4.2e-36 154.8 116 67.2
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 7.2e-36 154.1 107 71.0
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 1.6e-35 152.9 114 67.5
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 2.1e-35 152.5 118 65.3
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 3.6e-35 151.8 118 68.6
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 4.7e-35 151.4 134 62.7
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 6.1e-35 151.0 118 66.1
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.0e-34 150.2 110 71.8
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 1.4e-34 149.8 90 80.0
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 8.9e-34 147.1 115 61.7
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 3.4e-33 145.2 118 67.8
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 5.7e-33 144.4 118 63.6
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.3e-32 143.3 118 63.6
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 8.3e-32 140.6 88 76.1
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.8e-31 139.4 119 63.9
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 1.8e-31 139.4 158 52.5
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 7.0e-31 137.5 124 59.7
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 1.6e-30 136.3 85 77.6
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 2.0e-30 136.0 128 55.5
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 4.5e-30 134.8 118 62.7
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 3.8e-29 131.7 106 64.2
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 5.0e-29 131.3 111 64.9
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 1.9e-28 129.4 111 64.0
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 2.5e-28 129.0 70 85.7
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 3.3e-28 128.6 120 55.8
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 5.6e-28 127.9 84 76.2
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 1.2e-27 126.7 106 64.2
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 6.1e-27 124.4 100 67.0
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 1.4e-26 123.2 70 81.4
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 3.0e-26 122.1 115 56.5
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 2.0e-25 119.4 177 43.5
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 1.3e-24 116.7 69 79.7
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 3.2e-23 112.1 96 62.5
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 9.8e-17 90.5 82 59.8
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 7.8e-14 80.9 48 75.0
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 6.6e-13 77.8 60 63.3
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 1.5e-12 76.6 83 56.6
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 1.2e-11 73.6 66 53.0
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 1.6e-11 73.2 49 71.4
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 7.5e-09 64.3 50 66.0
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 2.4e-07 59.3 66 53.0
Duzib251G0730 Durio zibethinus HOM05D006060 ORTHO05D007268 1.2e-06 57.0 44 54.5


User provided reference genes

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