Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0984 Trochodendron aralioides HOM05D011880 ORTHO05D015193 2.8e-112 408.7 211 100.0
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 7.9e-43 177.9 209 50.2
TAR636G2004 Trochodendron aralioides HOM05D011880 ORTHO05D015193 2.1e-27 126.7 182 43.4
TAR374G0211 Trochodendron aralioides HOM05D011880 ORTHO05D015193 2.0e-25 120.2 186 44.6
TAR625G0958 Trochodendron aralioides HOM05D011880 ORTHO05D015193 3.5e-22 109.4 203 36.9
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 7.2e-20 101.7 214 35.5
TAR381G0812 Trochodendron aralioides HOM05D011880 ORTHO05D015193 2.1e-19 100.1 191 36.6
TAR369G1156 Trochodendron aralioides HOM05D011880 ORTHO05D015193 8.0e-19 98.2 163 42.3
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 1.4e-18 97.4 220 33.6
TAR362G0449 Trochodendron aralioides HOM05D011880 ORTHO05D015193 3.0e-18 96.3 142 43.7
TAR374G0174 Trochodendron aralioides HOM05D011880 ORTHO05D015193 4.0e-18 95.9 190 36.3
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 5.2e-18 95.5 210 32.9
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 5.2e-18 95.5 210 32.9
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 5.2e-18 95.5 210 32.9
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-17 92.4 211 32.2
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 7.5e-17 91.7 203 34.0
TAR636G3565 Trochodendron aralioides HOM05D011880 ORTHO05D015193 7.5e-17 91.7 202 34.7
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 6.3e-16 88.6 201 32.3
TAR369G0289 Trochodendron aralioides HOM05D011880 ORTHO05D015193 6.3e-16 88.6 77 55.8
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.2e-16 88.2 219 33.8
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 1.8e-15 87.0 219 33.8
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.8e-15 87.0 219 32.4
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.4e-15 86.7 219 32.4
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.1e-15 85.9 219 32.0
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 5.3e-15 85.5 206 31.1
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 5.3e-15 85.5 206 31.1
TAR629G1132 Trochodendron aralioides HOM05D011880 ORTHO05D015193 9.1e-15 84.7 207 32.9
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.6e-14 84.0 209 31.6
Nn5g30764 Nelumbo nucifera HOM05D000665 ORTHO05D003147 2.6e-14 83.2 207 31.4
TAR633G2037 Trochodendron aralioides HOM05D000665 ORTHO05D003147 4.5e-14 82.4 209 33.5
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 5.9e-14 82.0 208 29.8
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 5.9e-14 82.0 208 28.4
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-13 81.3 211 32.2
TAR375G0460 Trochodendron aralioides HOM05D011880 ORTHO05D015193 1.3e-13 80.9 121 42.1
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 5.0e-13 79.0 212 33.0
TAR628G0739 Trochodendron aralioides HOM05D000665 ORTHO05D003147 8.5e-13 78.2 208 33.2
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 1.1e-12 77.8 210 31.0
CSS0018305 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 1.5e-12 77.4 206 29.6
TAR623G1470 Trochodendron aralioides HOM05D011880 ORTHO05D015193 1.5e-12 77.4 176 34.7
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 1.9e-12 77.0 182 33.0
Aqoxy6G02200 Aquilegia oxysepala HOM05D000665 ORTHO05D003147 3.2e-12 76.3 213 29.1
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 3.2e-12 76.3 202 31.2
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 4.2e-12 75.9 209 30.6
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 7.2e-12 75.1 212 32.1
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 9.4e-12 74.7 209 30.1
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 1.6e-11 73.9 210 27.6
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 2.7e-11 73.2 217 28.6
PSO170G2007 Papaver somniferum HOM05D000665 ORTHO05D003147 2.7e-11 73.2 208 32.7
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 2.7e-11 73.2 210 29.0
PSO541G6499 Papaver somniferum HOM05D000665 ORTHO05D003147 3.6e-11 72.8 204 30.9
Aqoxy6G02328 Aquilegia oxysepala HOM05D000665 ORTHO05D000921 6.1e-11 72.0 205 27.8
Dinv33623 Davidia involucrata HOM05D000665 ORTHO05D003147 6.1e-11 72.0 209 27.8
vmacro05149 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 6.1e-11 72.0 211 29.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 8.0e-11 71.6 220 29.5
Cc01_g10760 Coffea canephora HOM05D000665 ORTHO05D000921 1.0e-10 71.2 221 28.5
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.0e-10 71.2 204 29.4
TWI12G0661 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 1.4e-10 70.9 215 29.8
Medtr5g022570 Medicago truncatula HOM05D000665 ORTHO05D003147 1.8e-10 70.5 204 31.4
PSO478G0596 Papaver somniferum HOM05D000665 ORTHO05D003147 2.3e-10 70.1 207 30.9
PSO170G0901 Papaver somniferum HOM05D000665 ORTHO05D003147 3.0e-10 69.7 204 29.9
Prupe.1G367300 Prunus persica HOM05D000665 ORTHO05D003147 3.0e-10 69.7 212 30.2
RcHm_v2.0_Chr2g0099061 Rosa chinensis HOM05D000665 ORTHO05D003147 3.0e-10 69.7 206 31.6
Cpa.g.sc6.284 Carica papaya HOM05D000665 ORTHO05D003147 4.0e-10 69.3 205 28.8
Nitab4.5_0002337g0110 Nicotiana tabacum HOM05D000665 ORTHO05D003147 4.0e-10 69.3 207 30.4
TWI56G0993 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 4.0e-10 69.3 210 30.5
TAR628G1412 Trochodendron aralioides HOM05D000665 ORTHO05D003147 4.0e-10 69.3 195 30.8
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 6.8e-10 68.6 210 31.0
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 6.8e-10 68.6 215 32.6
Nitab4.5_0000188g0150 Nicotiana tabacum HOM05D000665 ORTHO05D003147 8.8e-10 68.2 209 28.2
PSO170G5921 Papaver somniferum HOM05D000665 ORTHO05D003147 8.8e-10 68.2 204 32.8
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.2e-09 67.8 215 32.1
vmacro22150 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 1.2e-09 67.8 204 29.9
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.5e-09 67.4 210 30.0
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 2.6e-09 66.6 212 29.7
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.4e-09 66.2 210 30.0
Prupe.7G171400 Prunus persica HOM05D000665 ORTHO05D003147 4.4e-09 65.9 207 27.5
Rhsim04G0014700 Rhododendron simsii HOM05D000665 ORTHO05D003147 4.4e-09 65.9 207 29.5
Thecc.01G014900 Theobroma cacao HOM05D000665 ORTHO05D003147 4.4e-09 65.9 205 28.3
arahy.Tifrunner.gnm1.ann1.BDR352 Arachis hypogaea HOM05D000665 ORTHO05D003147 5.7e-09 65.5 211 27.5
arahy.Tifrunner.gnm1.ann1.Q4VSGN Arachis hypogaea HOM05D000665 ORTHO05D003147 5.7e-09 65.5 211 27.5
Duzib147G1337 Durio zibethinus HOM05D000665 ORTHO05D003147 9.8e-09 64.7 204 27.5
Glyma.17G257300 Glycine max HOM05D000665 ORTHO05D003147 9.8e-09 64.7 201 29.9
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 9.8e-09 64.7 215 27.0
PSO541G5373 Papaver somniferum HOM05D000665 ORTHO05D003147 9.8e-09 64.7 204 28.9
Actinidia22985 Actinidia chinensis HOM05D000665 ORTHO05D003147 1.3e-08 64.3 208 28.4
FvH4_1g11471 Fragaria vesca HOM05D000665 ORTHO05D003147 1.3e-08 64.3 206 28.6
PSO017G6967 Papaver somniferum HOM05D000665 ORTHO05D003147 1.3e-08 64.3 204 32.4
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 1.7e-08 63.9 214 28.5
CANSAT25G1420 Cannabis sativa HOM05D000665 ORTHO05D003147 1.7e-08 63.9 204 28.4
PSO017G0419 Papaver somniferum HOM05D000665 ORTHO05D003147 1.7e-08 63.9 191 29.8
Psat0s6520g0080 Pisum sativum HOM05D000665 ORTHO05D003147 1.7e-08 63.9 208 29.3
Psat2g153240 Pisum sativum HOM05D000665 ORTHO05D003147 1.7e-08 63.9 208 29.3
CAN.G576.1 Capsicum annuum HOM05D000665 ORTHO05D003147 2.2e-08 63.5 209 28.7
Phvul.001G007600 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 2.8e-08 63.2 201 28.9
GSVIVG01018738001 Vitis vinifera HOM05D000665 ORTHO05D003147 2.8e-08 63.2 204 28.9
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 3.7e-08 62.8 214 28.0
Ca_13420_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 4.8e-08 62.4 199 27.1
Psat0s4120g0080 Pisum sativum HOM05D000665 ORTHO05D003147 4.8e-08 62.4 208 29.3
TAR628G0209 Trochodendron aralioides HOM05D015137 ORTHO05D016484 4.8e-08 62.4 200 28.5
Duzib147G0627 Durio zibethinus HOM05D000665 ORTHO05D003147 6.3e-08 62.0 129 36.4
Phvul.002G106800 Phaseolus vulgaris HOM05D000665 ORTHO05D003147 6.3e-08 62.0 209 27.3
Actinidia17424 Actinidia chinensis HOM05D000665 ORTHO05D003147 8.3e-08 61.6 204 27.0
TPR.G10520 Trifolium pratense HOM05D000665 ORTHO05D003147 8.3e-08 61.6 204 30.4
Ca_13411_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 1.1e-07 61.2 199 27.1
CSS0001337 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 1.8e-07 60.5 207 27.1
COL.COLO4_22459 Corchorus olitorius HOM05D000665 ORTHO05D003147 1.8e-07 60.5 211 28.0
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.8e-07 60.5 129 34.9
Glyma.11G078600 Glycine max HOM05D000665 ORTHO05D003147 1.8e-07 60.5 209 27.8
Hund07193 Selenicereus undatus HOM05D000665 ORTHO05D003147 1.8e-07 60.5 124 35.5
Sopen02g012900 Solanum pennellii HOM05D000665 ORTHO05D003147 1.8e-07 60.5 209 26.8
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 2.4e-07 60.1 67 43.3
PSO675G7404 Papaver somniferum HOM05D000665 ORTHO05D003147 2.4e-07 60.1 210 28.6
PSO716G0001 Papaver somniferum HOM05D000665 ORTHO05D003147 3.1e-07 59.7 187 29.9
Solyc02g061940.4 Solanum lycopersicum HOM05D000665 ORTHO05D003147 3.1e-07 59.7 209 28.2
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.1e-07 59.3 216 30.1
Lj2g0027355 Lotus japonicus HOM05D000665 ORTHO05D003147 4.1e-07 59.3 205 29.3
Prupe.1G367200 Prunus persica HOM05D000665 ORTHO05D003147 4.1e-07 59.3 204 30.4
SGA_v2.0_scaffold108G30994 Striga asiatica HOM05D000665 ORTHO05D003147 4.1e-07 59.3 206 25.7
Medtr1g024830 Medicago truncatula HOM05D000665 ORTHO05D003147 5.4e-07 58.9 203 29.6
PSO675G3606 Papaver somniferum HOM05D000665 ORTHO05D003147 5.4e-07 58.9 176 33.0
GSVIVG01000255001 Vitis vinifera HOM05D000665 ORTHO05D003147 5.4e-07 58.9 128 35.2
Thhalv10011017m.g Eutrema salsugineum HOM05D000665 ORTHO05D003147 7.0e-07 58.5 205 26.8
Gohir.D11G180700 Gossypium hirsutum HOM05D000665 ORTHO05D003147 7.0e-07 58.5 211 25.6
RcHm_v2.0_Chr6g0302661 Rosa chinensis HOM05D000665 ORTHO05D003147 7.0e-07 58.5 220 27.3
PGSC0003DMG400023886 Solanum tuberosum HOM05D000665 ORTHO05D003147 7.0e-07 58.5 211 25.6
VMungo0647G0204 Vigna mungo HOM05D001045 ORTHO05D003147 7.0e-07 58.5 201 28.4
VMungo1215G1134 Vigna mungo HOM05D000665 ORTHO05D003147 7.0e-07 58.5 212 27.4
Potri.004G135901 Populus trichocarpa HOM05D000665 ORTHO05D003147 9.1e-07 58.2 128 35.2
TAR381G0257 Trochodendron aralioides HOM05D000665 ORTHO05D003147 9.1e-07 58.2 132 39.4
MSTRG.2726 Avicennia marina HOM05D000665 ORTHO05D003147 1.2e-06 57.8 209 27.3
Gorai.007G192500 Gossypium raimondii HOM05D000665 ORTHO05D003147 1.2e-06 57.8 211 25.6
Rhsim06G0022500 Rhododendron simsii HOM05D000665 ORTHO05D003147 1.2e-06 57.8 216 27.8
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.6e-06 57.4 207 23.2
CANSAT78G2452 Cannabis sativa HOM05D000665 ORTHO05D003147 1.6e-06 57.4 209 28.2
Cc07_g11040 Coffea canephora HOM05D000665 ORTHO05D003147 1.6e-06 57.4 208 26.0
PSO063G5726 Papaver somniferum HOM05D000876 ORTHO05D000285 1.6e-06 57.4 236 24.6
PSO782G4265 Papaver somniferum HOM05D000876 ORTHO05D000285 1.6e-06 57.4 236 24.6
Ca_24919_v3 Cicer arietinum L. HOM05D000665 ORTHO05D003147 2.0e-06 57.0 204 27.0
Nn6g32360 Nelumbo nucifera HOM05D000665 ORTHO05D003147 2.0e-06 57.0 202 27.7
MSTRG.23230 Avicennia marina HOM05D000665 ORTHO05D003147 2.7e-06 56.6 127 33.9
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.7e-06 56.6 207 24.2
Cfa020931 Carpinus fangiana HOM05D000665 ORTHO05D003147 2.7e-06 56.6 123 36.6
ECA233G4106 Erigeron canadensis HOM05D008473 ORTHO05D000921 2.7e-06 56.6 193 28.5
Hma1.2p1_0296F.1_g116800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.5e-06 56.2 132 34.8
Psat6g003760 Pisum sativum HOM05D000665 ORTHO05D003147 3.5e-06 56.2 204 28.9
QL02p011365 Quercus lobata HOM05D000665 ORTHO05D003147 3.5e-06 56.2 205 27.3
QL06p051064 Quercus lobata HOM05D000665 ORTHO05D003147 3.5e-06 56.2 205 27.3
Solyc08g062420.3 Solanum lycopersicum HOM05D000665 ORTHO05D003147 3.5e-06 56.2 216 26.9
Sopen08g017930 Solanum pennellii HOM05D000665 ORTHO05D003147 3.5e-06 56.2 216 26.9
Atru.chr3.852 Acer truncatum HOM05D000665 ORTHO05D003147 4.5e-06 55.8 205 29.8
CiPaw.08G130400 Carya illinoinensis HOM05D000665 ORTHO05D003147 5.9e-06 55.5 207 26.6
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 5.9e-06 55.5 216 28.2
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 5.9e-06 55.5 213 26.3
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 5.9e-06 55.5 213 26.3
Nn6g32004 Nelumbo nucifera HOM05D000665 ORTHO05D003147 5.9e-06 55.5 125 32.0
Oeu046373.1 Olea europaea HOM05D000665 ORTHO05D003147 5.9e-06 55.5 124 33.1
Sabra02G0019400 Salix brachista HOM05D000665 ORTHO05D003147 5.9e-06 55.5 207 27.1
TPR.G34347 Trifolium pratense HOM05D000665 ORTHO05D003147 5.9e-06 55.5 201 26.9
TAR381G0333 Trochodendron aralioides HOM05D000665 ORTHO05D003147 5.9e-06 55.5 201 29.4
Haze_03773 Corylus avellana HOM05D000665 ORTHO05D003147 7.7e-06 55.1 207 25.1
DCAR_019945 Daucus carota HOM05D000665 ORTHO05D003147 7.7e-06 55.1 130 35.4
FvH4_2g38651 Fragaria vesca HOM05D000665 ORTHO05D003147 7.7e-06 55.1 220 27.3
Glyma.01G164400 Glycine max HOM05D000665 ORTHO05D003147 7.7e-06 55.1 209 25.8
Gohir.A11G173600 Gossypium hirsutum HOM05D000665 ORTHO05D003147 7.7e-06 55.1 193 28.0
MBI04_g27247_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000285 7.7e-06 55.1 209 24.4


User provided reference genes

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