Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 6.1e-88 327.4 160 100.0
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.0e-66 256.9 156 80.8
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.8e-63 246.1 158 76.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.0e-62 242.7 160 76.2
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.6e-62 242.3 160 73.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 4.4e-62 241.5 161 76.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.3e-61 240.0 157 75.2
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 2.2e-61 239.2 158 72.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.1e-60 236.9 157 72.6
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.9e-60 236.1 162 72.2
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.2e-60 235.3 157 74.5
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.2e-60 235.3 156 73.7
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.1e-60 235.0 159 70.4
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 9.2e-60 233.8 162 71.6
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.2e-59 233.4 159 70.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.5e-59 231.9 161 71.4
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 4.6e-59 231.5 161 68.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 6.0e-59 231.1 159 73.6
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.3e-58 229.9 161 73.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.7e-58 229.6 159 69.8
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.3e-58 229.2 161 73.3
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.0e-58 228.8 161 72.0
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.0e-58 228.8 150 74.0
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 3.9e-58 228.4 161 73.3
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 5.1e-58 228.0 142 78.9
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 5.1e-58 228.0 161 73.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 6.6e-58 227.6 148 71.6
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 6.6e-58 227.6 152 73.0
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 1.5e-57 226.5 160 64.4
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 5.6e-57 224.6 160 65.6
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 9.5e-57 223.8 159 71.1
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 9.5e-57 223.8 145 77.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.2e-56 223.4 159 71.1
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.6e-56 221.9 158 68.4
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 3.6e-56 221.9 164 67.1
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 4.7e-56 221.5 158 69.0
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 6.2e-56 221.1 149 71.1
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 8.1e-56 220.7 160 66.9
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.1e-55 220.3 157 69.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.1e-55 220.3 158 68.4
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.1e-55 220.3 148 75.0
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.4e-55 219.9 146 75.3
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 5.2e-55 218.0 160 67.5
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 5.2e-55 218.0 159 67.9
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.5e-54 216.5 160 68.8
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 2.0e-54 216.1 168 63.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.4e-54 214.9 158 63.9
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 9.9e-54 213.8 158 68.4
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.3e-53 213.4 149 66.4
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.7e-53 213.0 141 74.5
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 2.2e-53 212.6 179 60.9
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 4.9e-53 211.5 207 55.1
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.1e-52 210.3 147 66.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.1e-52 210.3 144 72.2
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 2.4e-52 209.1 147 65.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 5.4e-52 208.0 159 64.8
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 9.2e-52 207.2 138 71.0
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.2e-51 206.8 149 67.1
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.6e-51 206.5 150 65.3
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 4.6e-51 204.9 160 65.0
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 6.0e-51 204.5 149 63.8
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 2.3e-50 202.6 158 65.2
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.0e-50 202.2 139 69.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.9e-50 201.8 149 63.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 8.6e-50 200.7 149 63.1
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 8.6e-50 200.7 190 57.9
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 1.5e-49 199.9 149 63.1
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.5e-49 199.9 173 61.3
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.9e-49 199.5 148 68.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.9e-49 199.5 149 63.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.9e-49 199.5 141 70.9
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.2e-48 196.8 162 64.8
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.6e-48 196.4 145 67.6
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 4.7e-48 194.9 163 58.9
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 6.2e-48 194.5 151 68.9
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.1e-47 192.2 141 68.1
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.1e-47 192.2 162 58.6
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.5e-46 189.9 158 62.0
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.0e-46 189.5 147 61.2
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 2.6e-46 189.1 140 62.9
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 4.4e-46 188.3 154 62.3
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.4e-44 183.3 150 62.0
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.2e-44 182.2 143 65.0
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 2.5e-33 146.0 131 56.5
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.6e-32 143.3 166 46.4
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 2.4e-31 139.4 109 56.9
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 2.7e-27 125.9 150 45.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 7.9e-27 124.4 78 79.5
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 6.2e-24 114.8 137 43.1
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.8e-23 113.2 135 44.4
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 6.4e-21 104.8 96 58.3
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 5.1e-18 95.1 82 61.0
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 6.7e-18 94.7 76 61.8
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 5.6e-17 91.7 76 60.5
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.8e-15 86.7 104 41.3
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 6.5e-13 78.2 67 52.2
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.5e-09 67.0 78 42.3
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 2.2e-08 63.2 69 49.3


User provided reference genes

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