Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.6e-36 155.6 80 100.0
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 1.6e-15 85.9 95 61.1
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 1.9e-13 79.0 76 59.2
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 4.2e-13 77.8 59 66.1
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 1.2e-12 76.3 45 80.0
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 1.2e-12 76.3 68 63.2
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 1.6e-12 75.9 73 58.9
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 2.1e-12 75.5 61 62.3
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 4.7e-12 74.3 66 63.6
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 6.1e-12 73.9 62 62.9
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 8.0e-12 73.6 77 51.9
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 8.0e-12 73.6 70 62.9
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.4e-11 72.8 59 64.4
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 1.4e-11 72.8 57 68.4
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 1.4e-11 72.8 92 47.8
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 1.4e-11 72.8 56 64.3
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 2.3e-11 72.0 61 65.6
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 2.3e-11 72.0 46 76.1
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 2.3e-11 72.0 46 76.1
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 3.0e-11 71.6 64 60.9
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 3.0e-11 71.6 56 64.3
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 3.0e-11 71.6 56 66.1
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 4.0e-11 71.2 77 50.6
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 4.0e-11 71.2 101 46.5
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 4.0e-11 71.2 61 60.7
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 5.2e-11 70.9 60 61.7
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 5.2e-11 70.9 77 50.6
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 5.2e-11 70.9 44 75.0
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 5.2e-11 70.9 54 66.7
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 6.7e-11 70.5 54 66.7
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 6.7e-11 70.5 48 66.7
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 8.8e-11 70.1 59 64.4
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 8.8e-11 70.1 66 54.5
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 8.8e-11 70.1 41 78.0
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 1.1e-10 69.7 45 73.3
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 1.5e-10 69.3 58 58.6
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 1.5e-10 69.3 57 63.2
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 1.5e-10 69.3 46 69.6
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 1.5e-10 69.3 46 69.6
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 1.5e-10 69.3 46 69.6
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 2.0e-10 68.9 50 66.0
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 2.0e-10 68.9 40 80.0
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 2.6e-10 68.6 43 81.4
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 2.6e-10 68.6 43 81.4
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 2.6e-10 68.6 85 52.9
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 2.6e-10 68.6 82 54.9
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 2.6e-10 68.6 63 58.7
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 3.3e-10 68.2 56 58.9
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 3.3e-10 68.2 45 73.3
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 3.3e-10 68.2 57 66.7
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 4.4e-10 67.8 77 49.4
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 4.4e-10 67.8 77 49.4
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 4.4e-10 67.8 53 64.2
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 4.4e-10 67.8 45 71.1
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 4.4e-10 67.8 61 59.0
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 5.7e-10 67.4 58 65.5
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 7.5e-10 67.0 69 53.6
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 7.5e-10 67.0 58 56.9
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 7.5e-10 67.0 40 77.5
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 7.5e-10 67.0 40 77.5
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 9.7e-10 66.6 59 61.0
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 9.7e-10 66.6 52 61.5
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 1.3e-09 66.2 60 60.0
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 1.3e-09 66.2 51 66.7
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 1.3e-09 66.2 55 61.8
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 1.3e-09 66.2 58 60.3
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 1.7e-09 65.9 54 59.3
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 2.2e-09 65.5 91 47.3
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 2.8e-09 65.1 58 58.6
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 3.7e-09 64.7 43 76.7
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 3.7e-09 64.7 41 75.6
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 6.3e-09 63.9 42 76.2
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 8.2e-09 63.5 60 58.3
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 8.2e-09 63.5 67 56.7
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 1.1e-08 63.2 42 73.8
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 1.1e-08 63.2 62 61.3
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.8e-08 62.4 41 65.9
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 2.4e-08 62.0 57 61.4
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 2.4e-08 62.0 89 44.9
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 3.1e-08 61.6 42 66.7
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 3.1e-08 61.6 34 79.4
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 3.1e-08 61.6 41 70.7
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 4.1e-08 61.2 43 65.1
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 4.1e-08 61.2 41 73.2
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 5.3e-08 60.8 41 63.4
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 7.0e-08 60.5 41 70.7
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 9.1e-08 60.1 79 44.3
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 1.2e-07 59.7 58 58.6
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.6e-07 59.3 100 44.0
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 1.6e-07 59.3 47 63.8
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 1.6e-07 59.3 61 49.2
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 1.6e-07 59.3 49 55.1
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 2.7e-07 58.5 50 60.0
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 3.5e-07 58.2 61 49.2
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 5.9e-07 57.4 63 57.1
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 5.9e-07 57.4 60 50.0
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 1.7e-06 55.8 44 61.4
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 2.9e-06 55.1 61 47.5
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 5.0e-06 54.3 78 47.4
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 6.5e-06 53.9 62 53.2
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 8.5e-06 53.5 41 58.5
PSO754G0004 Papaver somniferum HOM05D007247 ORTHO05D009208 8.5e-06 53.5 47 61.7


User provided reference genes

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