Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.9e-70 267.7 136 100.0
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.0e-48 194.9 139 75.5
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.9e-38 161.4 122 70.5
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.6e-28 129.8 100 70.0
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.1e-28 129.4 133 57.1
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 4.6e-28 128.3 115 60.0
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 2.8e-25 119.0 116 55.2
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 2.8e-25 119.0 116 55.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 3.7e-25 118.6 113 56.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.7e-25 118.6 112 58.0
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 1.8e-24 116.3 121 52.9
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 2.4e-24 115.9 91 62.6
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.4e-24 115.9 132 50.0
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 9.0e-24 114.0 122 50.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 9.0e-24 114.0 122 50.8
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.2e-23 113.6 116 56.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.5e-23 113.2 133 45.9
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.5e-23 111.7 122 54.1
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 5.9e-23 111.3 122 50.0
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 5.9e-23 111.3 140 49.3
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 7.6e-23 110.9 122 50.0
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 7.6e-23 110.9 117 51.3
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 7.6e-23 110.9 132 47.7
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 1.0e-22 110.5 118 53.4
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.0e-22 110.5 121 51.2
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 1.3e-22 110.2 104 54.8
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.3e-22 110.2 126 51.6
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 3.8e-22 108.6 102 54.9
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 3.8e-22 108.6 117 51.3
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 5.0e-22 108.2 119 50.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 5.0e-22 108.2 131 48.9
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 8.5e-22 107.5 125 49.6
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.1e-21 107.1 122 48.4
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 1.1e-21 107.1 115 51.3
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.9e-21 106.3 104 52.9
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.9e-21 106.3 130 46.9
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.5e-21 105.9 118 51.7
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.5e-21 105.9 118 51.7
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 2.5e-21 105.9 130 48.5
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 3.2e-21 105.5 106 52.8
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 3.2e-21 105.5 103 52.4
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 5.5e-21 104.8 89 59.6
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 5.5e-21 104.8 121 47.1
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 5.5e-21 104.8 120 49.2
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 7.2e-21 104.4 103 55.3
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 7.2e-21 104.4 103 55.3
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 7.2e-21 104.4 101 54.5
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 9.4e-21 104.0 129 48.1
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.2e-20 103.6 126 49.2
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.2e-20 103.6 103 50.5
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.2e-20 103.6 100 51.0
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.6e-20 103.2 100 51.0
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 2.1e-20 102.8 99 53.5
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 2.1e-20 102.8 99 53.5
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 2.1e-20 102.8 99 53.5
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 2.1e-20 102.8 106 50.0
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 2.7e-20 102.4 108 51.9
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.7e-20 102.4 101 54.5
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 3.6e-20 102.1 100 51.0
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.6e-20 102.1 97 53.6
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 4.6e-20 101.7 122 44.3
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 4.6e-20 101.7 123 48.8
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 6.1e-20 101.3 108 50.9
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 6.1e-20 101.3 122 49.2
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 7.9e-20 100.9 124 46.0
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.8e-19 99.8 99 49.5
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.3e-19 99.4 93 53.8
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 3.0e-19 99.0 105 45.7
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 5.1e-19 98.2 84 57.1
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 8.8e-19 97.4 101 47.5
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 8.8e-19 97.4 88 56.8
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.1e-18 97.1 110 47.3
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.5e-18 96.7 120 43.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.9e-18 96.3 93 50.5
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 3.3e-18 95.5 91 51.6
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 4.3e-18 95.1 95 52.6
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 4.3e-18 95.1 95 52.6
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 5.7e-18 94.7 128 45.3
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 5.7e-18 94.7 96 53.1
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 9.7e-18 94.0 97 50.5
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.3e-17 93.6 93 49.5
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 2.2e-17 92.8 126 43.7
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 2.2e-17 92.8 95 50.5
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 2.8e-17 92.4 123 45.5
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 3.7e-17 92.0 90 52.2
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 4.8e-17 91.7 85 54.1
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 4.8e-17 91.7 97 51.5
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 8.2e-17 90.9 103 46.6
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.1e-16 90.5 85 52.9
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.4e-16 90.1 85 52.9
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.4e-16 90.1 128 43.0
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.4e-16 90.1 107 45.8
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.1e-16 89.0 122 40.2
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.2e-15 87.0 97 50.5
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 2.6e-15 85.9 114 43.9
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 4.5e-15 85.1 71 54.9
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 2.9e-14 82.4 112 43.8
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.9e-14 82.4 82 51.2
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 5.0e-14 81.6 75 53.3
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.1e-13 80.5 69 55.1
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 2.5e-13 79.3 117 41.9
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 5.1e-11 71.6 90 42.2
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.5e-10 70.1 53 58.5
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 4.4e-10 68.6 77 45.5
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 7.0e-08 61.2 87 42.5
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 2.6e-07 59.3 107 31.8


User provided reference genes

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