Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0951 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.6e-85 319.3 154 100.0
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 5.9e-56 221.1 143 77.6
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 8.4e-34 147.5 139 58.3
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 5.4e-33 144.8 137 59.9
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 1.0e-31 140.6 142 52.8
Ciclev10018497m.g Citrus clementina HOM05D004430 ORTHO05D005088 5.6e-30 134.8 137 55.5
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 6.2e-29 131.3 151 49.0
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 1.1e-28 130.6 144 51.4
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 1.8e-28 129.8 151 48.3
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 5.2e-28 128.3 154 48.1
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 5.2e-28 128.3 138 52.9
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 6.8e-28 127.9 139 53.2
Hma1.2p1_0046F.1_g026730 Hydrangea macrophylla HOM05D004430 ORTHO05D005088 2.0e-27 126.3 140 55.0
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 2.0e-27 126.3 144 49.3
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 4.4e-27 125.2 141 48.2
Actinidia19337 Actinidia chinensis HOM05D004430 ORTHO05D005088 9.9e-27 124.0 132 49.2
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 2.2e-26 122.9 138 56.5
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 3.8e-26 122.1 141 49.6
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 3.8e-26 122.1 137 52.6
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 6.4e-26 121.3 150 50.0
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 8.4e-26 120.9 136 50.7
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 8.4e-26 120.9 145 49.0
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 1.4e-25 120.2 136 48.5
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 4.2e-25 118.6 137 50.4
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 1.6e-24 116.7 140 49.3
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 1.7e-23 113.2 138 50.7
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 2.3e-23 112.8 143 45.5
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 6.6e-23 111.3 136 47.1
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.5e-22 110.2 149 45.6
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.5e-22 110.2 149 45.6
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.9e-22 109.8 136 47.8
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 1.9e-22 109.8 113 54.0
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 2.5e-22 109.4 138 47.1
CiPaw.12G028500 Carya illinoinensis HOM05D004430 ORTHO05D005088 4.3e-22 108.6 142 44.4
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 4.3e-22 108.6 138 48.6
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 4.3e-22 108.6 136 47.8
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 7.3e-22 107.8 147 44.9
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 7.3e-22 107.8 142 46.5
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 9.6e-22 107.5 149 45.0
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.6e-21 106.7 143 46.9
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 1.6e-21 106.7 147 46.3
CiPaw.11G023400 Carya illinoinensis HOM05D004430 ORTHO05D005088 2.8e-21 105.9 140 46.4
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 8.1e-21 104.4 137 47.4
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 8.1e-21 104.4 137 47.4
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.1e-20 104.0 151 47.0
Actinidia33085 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.4e-20 103.6 121 47.1
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 1.8e-20 103.2 117 50.4
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 3.1e-20 102.4 138 44.9
MBI10_g44386_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.1e-20 102.4 145 47.6
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 5.3e-20 101.7 137 47.4
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 1.2e-19 100.5 137 46.7
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 2.6e-19 99.4 140 42.9
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 4.4e-19 98.6 138 47.8
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 5.8e-19 98.2 126 45.2
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 9.9e-19 97.4 137 45.3
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 9.9e-19 97.4 129 48.1
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 1.3e-18 97.1 135 40.7
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 2.2e-18 96.3 136 45.6
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 6.4e-18 94.7 142 46.5
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 8.4e-18 94.4 110 50.0
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 1.9e-17 93.2 136 46.3
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 4.2e-17 92.0 137 42.3
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 1.2e-16 90.5 146 43.8
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 1.2e-16 90.5 139 39.6
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 3.5e-16 89.0 142 37.3
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 1.0e-15 87.4 134 42.5
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 1.0e-15 87.4 136 42.6
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 1.3e-15 87.0 136 44.1
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 2.3e-15 86.3 115 47.8
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 2.3e-15 86.3 120 44.2
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 5.1e-15 85.1 140 42.9
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 5.6e-14 81.6 142 44.4
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 9.6e-14 80.9 147 36.7
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 1.3e-13 80.5 141 44.0
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 1.3e-13 80.5 136 39.7
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 1.6e-13 80.1 140 41.4
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 3.6e-13 79.0 141 44.7
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 4.8e-13 78.6 140 39.3
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 6.2e-13 78.2 144 38.2
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 1.5e-11 73.6 132 40.2
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 2.0e-11 73.2 145 44.8
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 2.6e-11 72.8 141 37.6
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 3.4e-11 72.4 133 37.6
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 3.4e-11 72.4 115 40.0
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 4.5e-11 72.0 139 34.5
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 4.5e-11 72.0 109 41.3
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 5.8e-11 71.6 161 34.8
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 7.6e-11 71.2 115 39.1
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 9.9e-11 70.9 112 41.1
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 1.3e-10 70.5 135 40.0
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 2.9e-10 69.3 131 38.9
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 3.8e-10 68.9 140 33.6
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 6.4e-10 68.2 135 37.0
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 1.4e-09 67.0 115 40.9
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 1.9e-09 66.6 149 36.9
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 5.5e-09 65.1 148 36.5
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 5.5e-09 65.1 141 36.2
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 7.1e-09 64.7 148 36.5
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 9.3e-09 64.3 148 36.5
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 9.3e-09 64.3 148 36.5
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 9.3e-09 64.3 148 36.5
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 1.6e-08 63.5 140 37.9
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 1.0e-07 60.8 111 36.0
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.3e-07 60.5 132 37.9
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.3e-07 60.5 132 37.9
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 1.3e-07 60.5 136 33.1
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 1.8e-07 60.1 111 36.0
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 1.5e-06 57.0 112 35.7
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 1.9e-06 56.6 105 36.2
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 1.9e-06 56.6 105 36.2


User provided reference genes

Program Settings