Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 3.5e-287 991.1 571 100.0
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 4.8e-167 592.0 551 66.2
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 8.9e-81 305.4 533 43.9
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 1.3e-71 275.0 550 38.2
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 6.8e-65 252.7 549 38.1
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 2.4e-57 227.6 553 37.8
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 4.9e-47 193.4 249 50.6
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 8.7e-44 182.6 496 34.5
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 2.1e-42 177.9 613 33.1
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 2.8e-42 177.6 537 34.8
MBI10_g00741_MAGBIO Magnolia biondii HOM05D012441 ORTHO05D013726 2.0e-40 171.4 598 35.5
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 1.1e-38 165.6 525 32.4
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 1.0e-36 159.1 540 33.1
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 5.6e-35 153.3 304 43.1
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 5.6e-35 153.3 583 32.4
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 4.8e-34 150.2 233 46.4
PSO782G2207 Papaver somniferum HOM05D034920 ORTHO05D037276 1.1e-33 149.1 555 31.2
Rhsim08G0050800 Rhododendron simsii HOM05D008944 ORTHO05D012715 2.0e-32 144.8 551 29.6
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 4.5e-32 143.7 599 29.7
Manes.17G112400 Manihot esculenta HOM05D013434 ORTHO05D014659 2.2e-31 141.4 362 35.6
TWI36G0429 Tripterygium wilfordii HOM05D013434 ORTHO05D014659 9.3e-30 136.0 314 40.8
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 3.3e-27 127.5 570 31.1
Nn3g16742 Nelumbo nucifera HOM05D008944 ORTHO05D012715 5.7e-27 126.7 401 29.7
Gorai.012G064000 Gossypium raimondii HOM05D010821 ORTHO05D012260 2.6e-24 117.9 574 28.9
Gohir.A05G355900 Gossypium hirsutum HOM05D010821 ORTHO05D012260 4.5e-24 117.1 589 27.5
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 4.5e-24 117.1 309 36.9
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 4.5e-24 117.1 601 30.9
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 2.2e-23 114.8 559 30.8
Oeu054621.3 Olea europaea HOM05D039831 ORTHO05D036970 1.1e-22 112.5 348 33.3
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 3.2e-22 110.9 557 33.0
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 1.2e-21 109.0 306 34.6
Gohir.D04G057300 Gossypium hirsutum HOM05D010821 ORTHO05D012260 1.6e-21 108.6 575 29.2
MSTRG.24036 Avicennia marina HOM05D025081 ORTHO05D019527 1.3e-20 105.5 315 35.2
Aqoxy5G03794 Aquilegia oxysepala HOM05D012441 ORTHO05D013726 3.0e-20 104.4 551 28.7
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 4.3e-19 100.5 521 29.4
Gorai.001G264900 Gossypium raimondii HOM05D010821 ORTHO05D029264 1.3e-18 99.0 336 34.2
Gohir.D07G229800 Gossypium hirsutum HOM05D010821 ORTHO05D029264 2.8e-18 97.8 336 33.6
CANSAT64G1129 Cannabis sativa HOM05D018456 ORTHO05D013726 1.1e-17 95.9 508 28.7
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 1.8e-17 95.1 121 51.2
Migut.H00079 Erythranthe guttata HOM05D025081 ORTHO05D019527 2.4e-17 94.7 283 37.8
Gohir.A07G223100 Gossypium hirsutum HOM05D010821 ORTHO05D029264 2.4e-17 94.7 336 33.6
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 5.3e-17 93.6 261 34.5
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 2.0e-16 91.7 606 27.9
Duzib147G0652 Durio zibethinus HOM05D010821 ORTHO05D029264 2.6e-16 91.3 569 29.7
PGR142G1054 Punica granatum HOM05D012441 ORTHO05D013726 4.5e-16 90.5 596 24.7
CAN.G473.9 Capsicum annuum HOM05D012441 ORTHO05D013726 1.1e-14 85.9 287 31.4
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 1.4e-14 85.5 285 32.6
THA.LOC104805961 Tarenaya hassleriana HOM05D011342 ORTHO05D013726 1.9e-14 85.1 626 26.5
SalBow1G1948 Salvia bowleyana HOM05D025081 ORTHO05D019527 5.5e-14 83.6 60 75.0
FAN14G4966 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.2e-13 82.4 635 26.0
Prupe.3G291300 Prunus persica HOM05D011862 ORTHO05D014222 1.6e-13 82.0 65 69.2
ECA232G4849 Erigeron canadensis HOM05D018074 ORTHO05D020589 2.1e-13 81.6 546 27.1
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 2.1e-13 81.6 266 32.3
SalBow1G7921 Salvia bowleyana HOM05D025081 ORTHO05D019527 2.7e-13 81.3 60 73.3
HanXRQChr09g0255141 Helianthus annuus HOM05D018074 ORTHO05D020589 3.6e-13 80.9 350 35.1
FvH4_6g51240 Fragaria vesca HOM05D011862 ORTHO05D014222 1.8e-12 78.6 637 25.6
FAN02G2635 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.8e-12 78.6 571 27.7
FAN09G0781 Fragaria x ananassa HOM05D011862 ORTHO05D014222 1.8e-12 78.6 597 26.6
HPP92_003080 Vanilla planifolia HOM05D008944 ORTHO05D012260 1.3e-10 72.4 346 29.8
CARHR261570 Cardamine hirsuta HOM05D011342 ORTHO05D013682 1.4e-09 68.9 319 32.0
A07p20270 Brassica napus HOM05D011342 ORTHO05D013682 3.1e-09 67.8 242 34.7
BcaC08g44455 Brassica carinata HOM05D011342 ORTHO05D013682 4.1e-09 67.4 235 34.0
BolC6t37106H Brassica oleracea HOM05D011342 ORTHO05D013682 4.1e-09 67.4 235 34.0
Lsat_1_v5_gn_4_183881 Lactuca sativa HOM05D018074 ORTHO05D020589 9.1e-09 66.2 582 26.6
EL10Ac6g13401 Beta vulgaris HOM05D036575 ORTHO05D031691 1.2e-08 65.9 332 27.7
Sp7g01470 Schrenkiella parvula HOM05D011342 ORTHO05D013682 2.6e-08 64.7 66 60.6
BraA07t29728Z Brassica rapa HOM05D011342 ORTHO05D013682 5.9e-08 63.5 336 32.1
vmacro05865 Vaccinium macrocarpon HOM05D008944 ORTHO05D017205 1.3e-07 62.4 292 30.5
Hund12983 Selenicereus undatus HOM05D008944 ORTHO05D012260 1.7e-07 62.0 324 26.5
C06p19060 Brassica napus HOM05D011342 ORTHO05D013682 2.2e-07 61.6 314 27.7
PSO063G1770 Papaver somniferum HOM05D034920 ORTHO05D037276 5.0e-07 60.5 502 26.1
Glyma.16G071500 Glycine max HOM05D013652 ORTHO05D016227 6.5e-07 60.1 581 22.9
Lj1g0010976 Lotus japonicus HOM05D013652 ORTHO05D016227 1.4e-06 58.9 387 27.1
MD17G1027400 Malus domestica HOM05D011862 ORTHO05D014222 1.4e-06 58.9 493 24.5
Lalb_Chr14g0362751 Lupinus albus HOM05D013652 ORTHO05D016227 5.5e-06 57.0 340 27.4
BcaB02g07948 Brassica carinata HOM05D011342 ORTHO05D013682 7.2e-06 56.6 568 25.2


User provided reference genes

Program Settings